PFAM Domains • Mycena amicta BAPX v1.0
Annotations/GenomesMyc59_1Mycami1Mycbel1Myccro1Mycepi1Mycgal1Mychae1Mycros1Mycrub1Mycvit1Panst_KUC8834_1_1Panst_LUM_1_1TotalAnnotation Description
PFAMs
15,27414,70911,57815,95718,56021,25511,85015,70518,17515,5058,99311,489179,050
11247 transmembrane receptor (rhodopsin family)
2137 transmembrane receptor (Secretin family)
816249586777495364575154722ATPase family associated with various cellular activities (AAA)
837457721031156189124825356969ABC transporter
46453444554553ATP synthase alpha/beta family, nucleotide-binding domain
22EGF-like domain
222018171920172022191721232Elongation factor Tu GTP binding domain
212115162023171718211415218Helix-loop-helix DNA-binding domain
1413812111010111015119134Hsp20/alpha crystallin family
101891414131214211388154Hsp70 protein
86108888881788105KH domain
11SH2 domain
162217151933201824212917251SH3 domain
161712161622151821141319199Actin
1637183792160157285294210613Ankyrin repeat
13149PAN domain
1414101616149171511810154ADP-ribosylation factor family
5376406292119496891703334787Eukaryotic aspartyl protease
33333433333438Cyclic nucleotide-binding domain
22Cytochrome b/b6/petB
1322322212323Cytochrome c
555681357877581Double-stranded RNA binding motif
222233323217142EF hand
334Fe-4S binding domain
21115Fibronectin type III domain
242834345054183140331310369Glutathione S-transferase, C-terminal domain
11111111211113Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
112Hemopexin
13131211141391113101111141Homeodomain
11Laminin EGF domain
22222212232224lactate/malate dehydrogenase, NAD binding domain
6796139675125691Myosin head (motor domain)
2392231702914205441583324592721251503,383Cytochrome P450
3942702533623844552533083433711852103,788Protein kinase domain
161414211821151619221916211Pyridine nucleotide-disulphide oxidoreductase
494430424689435470403135573Ras family
12121610162412131619109169Response regulator receiver domain
381110934648304746322829458RNase H
1017767856680636962666758861RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
112Reverse transcriptase (RNA-dependent DNA polymerase)
1111111111111Copper/zinc superoxide dismutase (SODC)
42333322223332Iron/manganese superoxide dismutases, alpha-hairpin domain
33263243577730506640527486Subtilase family
645553658094567771553945754Sugar (and other) transporter
121615141416131516131315172Thioredoxin
981178108810777100Tubulin/FtsZ family, GTPase domain
134von Willebrand factor type A domain
11WAP-type (Whey Acidic Protein) 'four-disulfide core'
325937515041313450536835541Zinc finger, C2H2 type
25351538172012126397111301Zinc finger, C3HC4 type (RING finger)
17923233129253221191711257Zinc knuckle
42222322312227Protein-tyrosine phosphatase
1431701162652632791202032642401231442,330short chain dehydrogenase
4557488284105357693925256825Zinc-binding dehydrogenase
56565555454459Thiolase, N-terminal domain
744811389101115810135Beta-ketoacyl synthase, N-terminal domain
31222222222222Fe-2S iron-sulfur cluster binding domain
112Papain family cysteine protease
13111221111116Enolase, C-terminal TIM barrel domain
99888137881189106Glutamine amidotransferase class-I
10111010101091111101111124TCP-1/cpn60 chaperonin family
63443543645754Glutamine synthetase, catalytic domain
21111111121114Triosephosphate isomerase
221717212227171920191819238E1-E2 ATPase
385123383549243438381920407Core histone H2A/H2B/H3/H4
11114Copper binding proteins, plastocyanin/azurin family
12151514201571517161314173Alpha amylase, catalytic domain
54547545447458Phorbol esters/diacylglycerol binding domain (C1 domain)
56787667454267Bacterial transferase hexapeptide (six repeats)
65754444573458tRNA synthetases class I (I, L, M and V)
141328251216151416222314212Cyclin, N-terminal domain
5964277313811754104115694449913Carboxylesterase family
45454444444450DNA polymerase family B
22333333333435ATP synthase subunit C
253416246968103291391214434Peroxidase
202292128481329352188262Beta-lactamase
66597866564472C-5 cytosine-specific DNA methylase
353531374346263039333733425Calcineurin-like phosphoesterase
262422253138242529261622308Cellulase (glycosyl hydrolase family 5)
56557656656567tRNA synthetases class II (D, K and N)
444437504246414147424044518Mitochondrial carrier protein
222016212228172021231721248Aminotransferase class I and II
44444443335345Phosphoribosyl transferase domain
151312151922121414131313175Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111111111112Phosphoglycerate kinase
22223222222225Ribosomal protein S4/S9 N-terminal domain
22222222222224Ribosomal protein S12/S23
11111111111213Chaperonin 10 Kd subunit
231517173436181825161614249C2 domain
7106991098139226118PH domain
2517121411141510151158157bZIP transcription factor
181725242356182222231718283Aldehyde dehydrogenase family
112165951841842101101451761781371181,814Fungal Zn(2)-Cys(6) binuclear cluster domain
213523252825212728262423306Cytochrome b5-like Heme/Steroid binding domain
22233112431125Oxidoreductase molybdopterin binding domain
8119131515111413141011144Oxidoreductase NAD-binding domain
302925272830252827312730337SNF2 family N-terminal domain
22132222242226Ribosomal protein S7p/S5e
282425282638252831272322325Ubiquitin-conjugating enzyme
76966665677677Isocitrate/isopropylmalate dehydrogenase
22222222222224Ribosomal Proteins L2, RNA binding domain
22322222232226Hsp90 protein
22222322232226Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111211111113Dihydrofolate reductase
214512321122Chitin recognition protein
85223522642243Cysteine-rich secretory protein family
11111111311114Ribosomal protein S3, C-terminal domain
879122711516161068135Cupin
11111222121116Annexin
1212214316Eukaryotic-type carbonic anhydrase
2223611311123Chalcone and stilbene synthases, N-terminal domain
533434433433422-oxoacid dehydrogenases acyltransferase (catalytic domain)
34155677553455Catalase
11111111121113Disintegrin
71310172316320191115145UDP-glucoronosyl and UDP-glucosyl transferase
61567710688971099Aminotransferase class-III
22222222422226Ribosomal protein S19
1211111111112DNA gyrase B
46534746744458Thiamine pyrophosphate enzyme, central domain
33334333443339Lyase
21222222622227Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
22122322322326Adenylate and Guanylate cyclase catalytic domain
21111111111113ATP synthase delta (OSCP) subunit
12111112111114Orotidine 5'-phosphate decarboxylase / HUMPS family
11111111221114Indole-3-glycerol phosphate synthase
42342334335541Aromatic amino acid lyase
11121111111113Pyruvate kinase, barrel domain
16121113101181312141210142Kinesin motor domain
323033353235303335332929386DnaJ domain
161514201618141816181618199Proteasome subunit
7936111058776786Major intrinsic protein
11212112111115ATP synthase
34343543333543Glycosyl hydrolase family 1
211412111111173'5'-cyclic nucleotide phosphodiesterase
21111111111113Profilin
22222322221224Ribosomal protein L22p/L17e
23293633232240Ribosomal protein L14p/L23e
132018162720152023211517225Ubiquitin family
45555746555561Cofilin/tropomyosin-type actin-binding protein
1311232222112114-3-3 protein
22Alkaline phosphatase
2512131113222Zinc carboxypeptidase
7762568610011066881091006060974Aldo/keto reductase family
898797887814699Myb-like DNA-binding domain
24109187118871069127Forkhead domain
11211111111113Glycosyl hydrolases family 32 N-terminal domain
33222212221224Ribosomal protein L16p/L10e
22222232222326Ribosomal protein S14p/S29e
43464334353345FKBP-type peptidyl-prolyl cis-trans isomerase
1112111111112Glutathione peroxidase
11
5647131181281277100Flavodoxin
22Tropomyosin
11111112111113Calreticulin family
4456674111082370Common central domain of tyrosinase
912121012141210131478133Aminotransferase class-V
422922072242258Ribonucleotide reductase, small chain
22669821251101557314310710160721,323DEAD/DEAH box helicase
1951031011401271739112712013198931,499Helicase conserved C-terminal domain
11111511121117EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22122235222227Ribosomal protein L23
11121223222322Pyridoxal-dependent decarboxylase, C-terminal sheet domain
2111111111112Ribosomal protein L5
6106766613866787Pyridoxal-dependent decarboxylase conserved domain
94444444743556Citrate synthase, C-terminal domain
54557656555664GHMP kinases N terminal domain
55676966776676Biotin carboxylase, N-terminal domain
12111111111113Tryptophan synthase alpha chain
14912109138101381010126Pyridoxal-phosphate dependent enzyme
21418'Paired box' domain
171714151517141614171313182NUDIX domain
54545545556659pfkB family carbohydrate kinase
37158122729821251389212Glycosyl hydrolases family 28
22222432222227Ribosomal protein L3
22222222222224Ribosomal protein L11, RNA binding domain
12991110111110101087118Histidine phosphatase superfamily (branch 1)
11211112111114Thymidylate synthase
11Lipoxygenase
46453544544553ATP synthase alpha/beta chain, C terminal domain
47665666567771Calponin homology (CH) domain
32232322225230Glutamine amidotransferases class-II
12222222222223Ribosomal protein S15
1175121227148181269141Thaumatin family
13111111111114Fructose-1-6-bisphosphatase, N-terminal domain
33384634385656Ribonucleotide reductase, all-alpha domain
22222222522227Ribosomal protein S2
33334332463441SRF-type transcription factor (DNA-binding and dimerisation domain)
385318414052162342252731406GATA zinc finger
16101213131312121618249168Amino acid permease
1316101613148151414811152Prolyl oligopeptidase family
22323223231227Ribosomal protein L30p/L7e
141210141414111514141311156Histidine phosphatase superfamily (branch 2)
11111111111112Respiratory-chain NADH dehydrogenase, 30 Kd subunit
54455545555658Aconitase family (aconitate hydratase)
856781064765476Glycosyl hydrolase family 10
21333123222226Glycosyl hydrolases family 17
22222221222122Ribosomal protein S5, N-terminal domain
22222222222224Nucleoside diphosphate kinase
107567669775681Tetraspanin family
213Galactoside-binding lectin
22222223422227Ribosomal protein S10p/S20e
9121091720812181295141Arrestin (or S-antigen), N-terminal domain
11111111111112Phosphoglucose isomerase
121214131111230Carbohydrate phosphorylase
13113112111218SecY translocase
13111111131116Respiratory-chain NADH dehydrogenase, 49 Kd subunit
12222222222122Ribosomal protein L6
10437513481053375Polyprenyl synthetase
23322422622333Hexokinase
2516111216211313141559170Dynamin family
11111121112114Transcription factor TFIID (or TATA-binding protein, TBP)
42333523634341Rieske [2Fe-2S] domain
12112111111Phytochrome region
978971087888897Biotin-requiring enzyme
11111111111112Phosphofructokinase
22222221222223Ribosomal protein S17
12222212111118Hydroxymethylglutaryl-coenzyme A reductase
34343333333338FGGY family of carbohydrate kinases, N-terminal domain
9101013171715172013911161Enoyl-CoA hydratase/isomerase
12223222222224Ribosomal protein S9/S16
22222222232225Transcription factor TFIIB repeat
914781089710788105Cytidine and deoxycytidylate deaminase zinc-binding region
1111111111111Molybdopterin oxidoreductase
24251114101912161217177184Chromo (CHRromatin Organisation MOdifier) domain
33333335333338Phosphatidylinositol-specific phospholipase C, Y domain
810676767663476Phosphatidylinositol-specific phospholipase C, X domain
71187128671087596D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22232222222225Malic enzyme, N-terminal domain
111111122211156-phosphogluconate dehydrogenase, C-terminal domain
332718355238123244251112339Multicopper oxidase
89710710877610998WW domain
32323222222227Ribosomal RNA adenine dimethylase
2001341321602091821361602141611251331,946WD domain, G-beta repeat
64334434432242Heavy-metal-associated domain
43333333333337Adenylate kinase
22233323322330Phosphoglucomutase/phosphomannomutase, C-terminal domain
32322222221326Ribosomal protein S8
22233222223328Ribosomal protein S11
68676667766677LIM domain
11Matrixin
53456645663356Regulator of chromosome condensation (RCC1) repeat
22222222222224Ribosomal protein S13/S18
23222222222225chorismate binding enzyme
5654534544455460s Acidic ribosomal protein
66465565765667Prenyltransferase and squalene oxidase repeat
55565654558564Protein kinase C terminal domain
11111111111112Single-strand binding protein family
11Type II/IV secretion system protein
11111111111112S-adenosylmethionine synthetase, N-terminal domain
231311151324121716131110178Bromodomain
112212131813101313131113162Acyl-CoA dehydrogenase, C-terminal domain
182118161619161421162120216Ubiquitin carboxyl-terminal hydrolase
111111118Ribosomal protein L36
574361166655569Ribonuclease T2 family
518546744794477HSF-type DNA-binding
32222222222225SRP54-type protein, GTPase domain
21111111111113Urease alpha-subunit, N-terminal domain
383417265444295064222328429Serine carboxypeptidase
9101091199910999113Phosphatidylinositol 3- and 4-kinase
42223224222229Transketolase, thiamine diphosphate binding domain
33227967725659Glycosyl hydrolases family 11
1111116WHEP-TRS domain
42323323432233Inositol monophosphatase family
57457745654766Glutaredoxin
42223223235232Isocitrate lyase family
21221111111216Serine hydroxymethyltransferase
323211756664560Iron-containing alcohol dehydrogenase
22223322232227Ribosomal protein L10
514576545745673KOW motif
1111111111111Ribosomal protein L34
1111111111111Ribosomal protein L33
33333333332335RF-1 domain
33334114423435Sodium:solute symporter family
11111111111112Imidazoleglycerol-phosphate dehydratase
11111111111112DNA polymerase family A
11112112121115IMP dehydrogenase / GMP reductase domain
21222222222223Glucose-6-phosphate dehydrogenase, NAD binding domain
311911152114161419181616210Protein phosphatase 2C
31333333332333Nucleotidyl transferase
4546121265973376Carbonic anhydrase
11111111111112Phosphoribulokinase / Uridine kinase family
151711192216151321181315195Fatty acid desaturase
66666666676774MutS domain V
11111111111112Delta-aminolevulinic acid dehydratase
55556546844461Arginase family
66667975666777MCM P-loop domain
23322333221228Squalene/phytoene synthase
192718432128152119161617260FHA domain
6963548480113467682764349835AMP-binding enzyme
414725234568323242282929441G-protein alpha subunit
223122292725272126232120294HMG (high mobility group) box
99101010146981366110His Kinase A (phospho-acceptor) domain
11358115110735574Armadillo/beta-catenin-like repeat
252017152624122118173016241Tetratricopeptide repeat
43333643443545Ion transport protein
1311111111113DNA gyrase/topoisomerase IV, subunit A
611977107998129104BRCA1 C Terminus (BRCT) domain
7756616351188789Glycosyl transferases group 1
64244424534345Glycosyl transferase family 2
11311221212127SAM domain (Sterile alpha motif)
83454454655356linker histone H1 and H5 family
1111111111111Ribosomal protein L7/L12 C-terminal domain
34255736338Pectate lyase
212111223520ribonuclease
21111111111113Urease, gamma subunit
34444434354547CoA-ligase
15121114253111182117811194Phosphopantetheine attachment site
22222223221224Formyl transferase
131412111216151314151011156Metallopeptidase family M24
45226125112343Leucine Rich Repeat
322421223649223939225319378alpha/beta hydrolase fold
33343433332337RNA polymerase Rpb2, domain 6
9555111156954580PB1 domain
22222222222224Staphylococcal nuclease homologue
121212121214121213141013148Rab-GTPase-TBC domain
11111111111112Tudor domain
21122222331223WH1 domain
1544976310873480Zinc finger, ZZ type
1121111111112HRDC domain
711710101171099108109CBS domain
22222222222224Ribosomal protein L13
32222322222226Ribosomal protein L4/L1 family
11111111111112Clp protease
54