PFAM Domains • Encephalitozoon intestinalis ATCC 50506
Annotations/GenomesAntlo1Enccu1Encin1Nempa1TotalAnnotation Description
PFAMs
1,1661,4251,3641,2315,186
918191763ATPase family associated with various cellular activities (AAA)
101314643ABC transporter
12227ATP synthase alpha/beta family, nucleotide-binding domain
376622Elongation factor Tu GTP binding domain
333312Hsp70 protein
345214KH domain
22Methyl-accepting chemotaxis protein (MCP) signalling domain
11SH2 domain
12227Actin
2237Ankyrin repeat
343313ADP-ribosylation factor family
2215Cyclic nucleotide-binding domain
433111EF hand
11134Fe-4S binding domain
1113Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
91011434Homeodomain
22217Myosin head (motor domain)
25272625103Protein kinase domain
11136Pyridine nucleotide-disulphide oxidoreductase
899834Ras family
22Response regulator receiver domain
1318181160RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
1113Iron/manganese superoxide dismutases, alpha-hairpin domain
32229Subtilase family
3227Sugar (and other) transporter
22228Thioredoxin
3339Tubulin/FtsZ family, GTPase domain
11von Willebrand factor type A domain
767929Zinc finger, C2H2 type
1618151665Zinc finger, C3HC4 type (RING finger)
2158Zinc knuckle
11114Protein-tyrosine phosphatase
12328short chain dehydrogenase
112Zinc-binding dehydrogenase
2114Thiolase, N-terminal domain
111142Fe-2S iron-sulfur cluster binding domain
11114Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
12216Glutamine amidotransferase class-I
888832TCP-1/cpn60 chaperonin family
11Glutamine synthetase, catalytic domain
11114Triosephosphate isomerase
12238E1-E2 ATPase
333413Core histone H2A/H2B/H3/H4
1124Phorbol esters/diacylglycerol binding domain (C1 domain)
11215Bacterial transferase hexapeptide (six repeats)
12227tRNA synthetases class I (I, L, M and V)
32229Cyclin, N-terminal domain
233311DNA polymerase family B
1124ATP synthase subunit C
466420Calcineurin-like phosphoesterase
233311tRNA synthetases class II (D, K and N)
32229Aminotransferase class I and II
11Phosphoribosyl transferase domain
11Sigma-54 interaction domain
12227Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1113Phosphoglycerate kinase
1113Ribosomal protein S4/S9 N-terminal domain
1113Ribosomal protein S12/S23
11114C2 domain
112PH domain
112bZIP transcription factor
1113Cytochrome b5-like Heme/Steroid binding domain
32229Oxidoreductase NAD-binding domain
466723SNF2 family N-terminal domain
41117Ribosomal protein S7p/S5e
1188734Ubiquitin-conjugating enzyme
1113Chitinase class I
11114Hsp90 protein
3216Dihydrofolate reductase
1113Cysteine-rich secretory protein family
21115Ribosomal protein S3, C-terminal domain
11Catalase
112Disintegrin
11Aminotransferase class-III
21115Ribosomal protein S19
11114DNA gyrase B
11Lyase
1113Ferritin-like domain
11Adenylate and Guanylate cyclase catalytic domain
1113Pyruvate kinase, barrel domain
266620Kinesin motor domain
1011111345DnaJ domain
914141451Proteasome subunit
11114Major intrinsic protein
1123'5'-cyclic nucleotide phosphodiesterase
1113Ribosomal protein L22p/L17e
1113Ribosomal protein L14p/L23e
256619Ubiquitin family
1113Cofilin/tropomyosin-type actin-binding protein
111314-3-3 protein
11114Aldo/keto reductase family
899632Myb-like DNA-binding domain
12238Forkhead domain
1113Ribosomal protein S14p/S29e
11FKBP-type peptidyl-prolyl cis-trans isomerase
11114Glutathione peroxidase
1113
11114Flavodoxin
11Common central domain of tyrosinase
1113Thymidine kinase
21115Aminotransferase class-V
1113Ribonucleotide reductase, small chain
817171759DEAD/DEAH box helicase
1328283099Helicase conserved C-terminal domain
1113Fructose-bisphosphate aldolase class-I
12216Ribosomal protein L23
11114Ribosomal protein L5
2226GHMP kinases N terminal domain
11Biotin carboxylase, N-terminal domain
22Pyridoxal-phosphate dependent enzyme
12227NUDIX domain
22pfkB family carbohydrate kinase
12216Ribosomal protein L3
11114Ribosomal protein L11, RNA binding domain
3216Thymidylate synthase
12227ATP synthase alpha/beta chain, C terminal domain
133310Calponin homology (CH) domain
11114Glutamine amidotransferases class-II
11114Ribosomal protein S15
11Fructose-1-6-bisphosphatase, N-terminal domain
1113Ribonucleotide reductase, all-alpha domain
21115Ribosomal protein S2
1113SRF-type transcription factor (DNA-binding and dimerisation domain)
222410GATA zinc finger
1113Amino acid permease
21115Ribosomal protein L30p/L7e
11114Histidine phosphatase superfamily (branch 2)
11114Ribosomal protein S5, N-terminal domain
1113Nucleoside diphosphate kinase
112Tetraspanin family
314Ribosomal protein S10p/S20e
21115Phosphoglucose isomerase
11114SecY translocase
1113Ribosomal protein L6
2114Polyprenyl synthetase
11114Hexokinase
12216Dynamin family
11114Transcription factor TFIID (or TATA-binding protein, TBP)
11Phytochrome region
11Biotin-requiring enzyme
11114Phosphofructokinase
1113Ribosomal protein S17
1113Hydroxymethylglutaryl-coenzyme A reductase
1113Ribosomal protein S9/S16
12227Transcription factor TFIIB repeat
2226Cytidine and deoxycytidylate deaminase zinc-binding region
22217Chromo (CHRromatin Organisation MOdifier) domain
11D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
11Bacterial regulatory proteins, gntR family
111146-phosphogluconate dehydrogenase, C-terminal domain
1113WW domain
11114Ribosomal RNA adenine dimethylase
20343426114WD domain, G-beta repeat
1113Adenylate kinase
112Phosphoglucomutase/phosphomannomutase, C-terminal domain
11114Ribosomal protein S8
11114Ribosomal protein S11
11114Regulator of chromosome condensation (RCC1) repeat
11114Ribosomal protein S13/S18
12360s Acidic ribosomal protein
11125Prenyltransferase and squalene oxidase repeat
112Protein kinase C terminal domain
11Type II/IV secretion system protein
11S-adenosylmethionine synthetase, N-terminal domain
244818Bromodomain
245415Ubiquitin carboxyl-terminal hydrolase
32229HSF-type DNA-binding
32229SRP54-type protein, GTPase domain
144413Phosphatidylinositol 3- and 4-kinase
11114Transketolase, thiamine diphosphate binding domain
11Inositol monophosphatase family
133310Glutaredoxin
2215Serine hydroxymethyltransferase
31116Ribosomal protein L10
11114KOW motif
11114Glucose-6-phosphate dehydrogenase, NAD binding domain
11114Nucleotidyl transferase
11Phosphoribulokinase / Uridine kinase family
32218MutS domain V
688830MCM P-loop domain
23229AMP-binding enzyme
11114HMG (high mobility group) box
22His Kinase A (phospho-acceptor) domain
11114Armadillo/beta-catenin-like repeat
486624Tetratricopeptide repeat
11114DNA gyrase/topoisomerase IV, subunit A
13228BRCA1 C Terminus (BRCT) domain
11125Glycosyl transferases group 1
11114Glycosyl transferase family 2
2226Metallopeptidase family M24
941097120Leucine Rich Repeat
2114alpha/beta hydrolase fold
3339RNA polymerase Rpb2, domain 6
233311Rab-GTPase-TBC domain
11Zinc finger, ZZ type
11HRDC domain
11CBS domain
31116Ribosomal protein L13
1113Ribosomal protein L4/L1 family
11Clp protease
2226S1 RNA binding domain
1113AhpC/TSA family
32229tRNA synthetases class I (W and Y)
11UvrD/REP helicase N-terminal domain
1113Rhodanese-like domain
777728Acetyltransferase (GNAT) family
112SecE/Sec61-gamma subunits of protein translocation complex
455519tRNA synthetase class II core domain (G, H, P, S and T)
11114Tetrapyrrole (Corrin/Porphyrin) Methylases
22TonB dependent receptor
1214Phospholipase D Active site motif
112GTPase-activator protein for Ras-like GTPase
12216RhoGAP domain
11114RhoGEF domain
11SPRY domain
233311RNA polymerase Rpb1, domain 2
11114Guanylate kinase
2215Gelsolin repeat
2237UBA/TS-N domain
432312PHD-finger
12238HECT-domain (ubiquitin-transferase)
11Helix-hairpin-helix motif
112BRCA2 repeat
11114MSP (Major sperm protein) domain
11114RanBP1 domain
2114PPIC-type PPIASE domain
11Zn-finger in Ran binding protein and others
777526Zinc finger C-x8-C-x5-C-x3-H type (and similar)
11B-box zinc finger
112F-box domain
112Ricin-type beta-trefoil lectin domain
11114Inhibitor of Apoptosis domain
11Poly-adenylate binding protein, unique domain
11POLO box duplicated region
1225ABC transporter transmembrane region
12216FAD binding domain
11S-adenosyl-L-homocysteine hydrolase, NAD binding domain
11HAMP domain
11114ribosomal L5P family C-terminus
11125Insulinase (Peptidase family M16)
1113Dehydrogenase E1 component
11215Elongation factor G C-terminus
11114DnaJ central domain
21115Ribosomal protein L1p/L10e family
12216dUTPase
355417haloacid dehalogenase-like hydrolase
11114Proliferating cell nuclear antigen, N-terminal domain
1113Peptidase S24-like
1113Inorganic pyrophosphatase
2114HhH-GPD superfamily base excision DNA repair protein
112Asparagine synthase
333413Septin
22228tRNA synthetases class I (E and Q), catalytic domain
11114tRNA synthetases class I (R)
133310XPG N-terminal domain
244414Metallo-beta-lactamase superfamily
11114RNB domain
1113CNH domain
112PX domain
1113UBX domain
11237Pumilio-family RNA binding repeat
456419Histone-like transcription factor (CBF/NF-Y) and archaeal histone
11114ER lumen protein retaining receptor
11114Glycoprotease family
11114
11114Ribosomal L15
11114Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
13116Ribosomal L29 protein
112Ribosomal L39 protein
21115Ribosomal S17
31116Ribulose-phosphate 3 epimerase family
31116RNA pseudouridylate synthase
22228Histone deacetylase domain
1113POT family
2114SET domain
11114Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
244313XPG I-region
11DNA photolyase
1113Cytosol aminopeptidase family, catalytic domain
1225Cullin family
233412ThiF family
11114Ribosomal family S4e
1113Sulfate permease family
454316Mechanosensitive ion channel
3115Adaptor complexes medium subunit family
1113Exonuclease
1113Ribosomal protein L44
11ABC 3 transport family
11Glycosyl transferase family 4
112Synaptobrevin
11Adenosine/AMP deaminase
22228Glycosyltransferase family 20
11PAS fold
333312Sec1 family
22217GDP dissociation inhibitor
11114Sodium/hydrogen exchanger family
22228RNA polymerase Rpb3/RpoA insert domain
11114Ribosomal S3Ae family
11114Gamma-glutamyltranspeptidase
31116Ribosomal L40e family
1113TatD related DNase
12216Dynamin central region
11Carboxyl transferase domain
11Cys/Met metabolism PLP-dependent enzyme
23218ABC-2 type transporter
2226CDP-alcohol phosphatidyltransferase
1113ATP dependent DNA ligase domain
11Nitrite and sulphite reductase 4Fe-4S domain
31116Ribosomal protein S19e
11114Ribosomal protein S6e
333312Transcription factor S-II (TFIIS)
11Cyclin-dependent kinase regulatory subunit
11Asparaginase
112DNA mismatch repair protein, C-terminal domain
112Dephospho-CoA kinase
11114G10 protein
1122-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
11114DNA topoisomerase
1113RNA 3'-terminal phosphate cyclase
311163' exoribonuclease family, domain 1
11114tRNA-splicing ligase RtcB
21115tRNA pseudouridine synthase D (TruD)
11Coenzyme A transferase
2215Cytidylyltransferase family
11114GDA1/CD39 (nucleoside phosphatase) family
112GNS1/SUR4 family
1113Hydroxymethylglutaryl-coenzyme A synthase N terminal
11114Ribosomal protein L21e
11114Ribosomal protein L36e
333211RIO1 family
1113Tub family
112Putative RNA methylase family UPF0020
11114PP-loop family
1113Shwachman-Bodian-Diamond syndrome (SBDS) protein
1113Translation initiation factor 1A / IF-1
53341516S rRNA methyltransferase RsmB/F
11114RNA polymerase Rpb5, C-terminal domain
11114RNA polymerase Rpb6
223411RNA polymerase Rpb3/Rpb11 dimerisation domain
11114RNA polymerases N / 8 kDa subunit
11Ribosomal protein L31
11114Ribosomal protein L31e
31116Ribosomal protein L34e
1113Ribosomal protein S28e
22228Ribosomal protein S8e
11125Trehalase
4228Dihydrouridine synthase (Dus)
11114NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
21115Casein kinase II regulatory subunit
112Clathrin adaptor complex small chain
32218HIT domain
1113Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain
1113Protein prenyltransferase alpha subunit repeat
1124Ribosomal protein L24e
1113Ribosomal protein L35Ae
255517Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
314Ribosomal protein S21e
1124Translation initiation factor SUI1
1113Putative undecaprenyl diphosphate synthase
1113Carbohydrate kinase
1113Xylose isomerase-like TIM barrel
11Aldose 1-epimerase
11114FAD dependent oxidoreductase
11114Fibrillarin
11114Ribosomal protein L19e
112Ribosomal protein S24e
1113Ribosomal protein S26e
11114Ribosomal protein L13e
1113Telomere recombination
11114CAP-Gly domain
11FlhB HrpN YscU SpaS Family
112Creatinase/Prolidase N-terminal domain
11114mRNA capping enzyme, catalytic domain
665522OB-fold nucleic acid binding domain
112Kelch motif
21115Ribonuclease HII
11114Sec7 domain
11114SIS domain
11114Helix-turn-helix
11ARID/BRIGHT DNA binding domain
11Chromo shadow domain
22217JAB1/Mov34/MPN/PAD-1 ubiquitin protease
444315PCI domain
11114tRNA synthetases class I (C) catalytic domain
11114tRNA synthetases class II core domain (F)
1113tRNA synthetases class II (A)
22228Putative GTPase activating protein for Arf
11C-terminal tandem repeated domain in type 4 procollagen
12227tRNA pseudouridine synthase
1113Reprolysin (M12B) family zinc metalloprotease
81212840LSM domain
11114AN1-like Zinc finger
14218Peptidase family M1 domain
1113Peptidase family M48
1113Viral (Superfamily 1) RNA helicase
11Uncharacterized protein family (UPF0051)
112Eukaryotic porin
1113Skp1 family, dimerisation domain
12216Cytidylyltransferase-like
11Putative peptidoglycan binding domain
22239PUA domain
422210S4 domain
255416Transmembrane amino acid transporter protein
2114Frataxin-like domain
11114V-type ATPase 116kDa subunit family
112Phosphatidylinositol-4-phosphate 5-Kinase
11114TruB family pseudouridylate synthase (N terminal domain)
21115ATP-NAD kinase
11125Polysaccharide deacetylase
355316DHHC palmitoyltransferase
112CorA-like Mg2+ transporter protein
11114Cation efflux family
11Bacterial extracellular solute-binding protein
233311Acyltransferase
11114DnaJ C terminal domain
31127PAP2 superfamily
11G-patch domain
11114Putative tRNA binding domain
11114NifU-like N terminal domain
112Ribosomal protein S27a
22127Adaptin N terminal region
113'-5' exonuclease
1113MutS domain I
112Choline/ethanolamine kinase
11Peptidase C13 family
2125Eukaryotic initiation factor 4E
11114Ribosomal protein L32
11Type I phosphodiesterase / nucleotide pyrophosphatase
112Ribosomal protein S27
11114Metalloenzyme superfamily
11Proteolipid membrane potential modulator
112Queuine tRNA-ribosyltransferase
12126UTP--glucose-1-phosphate uridylyltransferase
22IPP transferase
1113Ham1 family
12227FtsJ-like methyltransferase
1113Patatin-like phospholipase
11114Poly A polymerase head domain
11tRNA (Guanine-1)-methyltransferase
11114Toprim domain
11Glycosyltransferase family 25 (LPS biosynthesis protein)
22217Lipase (class 3)
11Ribosome recycling factor
1113Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
11Ribosomal L22e protein family
112Ribosomal L27e protein family
112Ribosomal L29e protein family
1113Ribosomal L37ae protein family
1113NIF3 (NGG1p interacting factor 3)
11Alternative oxidase
21115Glycolipid 2-alpha-mannosyltransferase
23229snoRNA binding domain, fibrillarin
1113ATP synthase subunit D
112DIL domain
22228Proteasome/cyclosome repeat
22228MOZ/SAS family
11114Putative diphthamide synthesis protein
22228Domain found in IF2B/IF5
1214RNase P subunit p30
11114Iron-sulfur cluster assembly protein
11114DNA primase small subunit
112Rpp14/Pop5 family
11114Diphthamide synthase
1113Ribosomal protein L37e
22217Nucleotidyltransferase domain
11114eIF-6 family
11114Deoxyhypusine synthase
112SRP19 protein
45551950S ribosome-binding GTPase
11TRAM domain
112HD domain
11Tripartite tricarboxylate transporter TctA family
1113tRNA intron endonuclease, catalytic C-terminal domain
21115Peptidyl-tRNA hydrolase PTH2
1113ATP synthase (F/14-kDa) subunit
11114ATP synthase (E/31 kDa) subunit
11114ATP synthase (C/AC39) subunit
11114TFIIE alpha subunit
1113N2,N2-dimethylguanosine tRNA methyltransferase
11114SAP domain
11114CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
1113Phosphatidylinositol transfer protein
12216
2114Nuclear transport factor 2 (NTF2) domain
112Sir2 family
1113Zn-finger in ubiquitin-hydrolases and other protein
1113RNA polymerases M/15 Kd subunit
11PAZ domain
11Piwi domain
112AT hook motif
22217Formin Homology 2 Domain
112Hr1 repeat
1113STE like transcription factor
1113SWIB/MDM2 domain
2215Dynamin GTPase effector domain
11114Thymidylate kinase
1113Cytidylate kinase
1214Methylpurine-DNA glycosylase (MPG)
11RFX DNA-binding domain
11FAT domain
1124FATC domain
1124Transcription initiation factor IID, 18kD subunit
11114TFIIF, beta subunit HTH domain
11114Transcription initiation factor IID, 31kD subunit
11HORMA domain
22217E2F/DP family winged-helix DNA-binding domain
11OTU-like cysteine protease
21115Trehalose-phosphatase
112Cell division protein 48 (CDC48), N-terminal domain
1113Dolichyl-phosphate-mannose-protein mannosyltransferase
12216SacI homology domain
1113Putative methyltransferase
11114Seryl-tRNA synthetase N-terminal domain
11Ribosomal silencing factor during starvation
11Lecithin:cholesterol acyltransferase
577726RecF/RecN/SMC N terminal domain
1113Tim17/Tim22/Tim23/Pmp24 family
11Biopolymer transport protein ExbD/TolR
21115Met-10+ like-protein
11Oligosaccharyl transferase STT3 subunit
543416Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
11125ZIP Zinc transporter
112Acyl-CoA thioesterase
1113Uncharacterised ACR, YagE family COG1723
11114GlcNAc-PI de-N-acetylase
112Uncharacterised ACR, YggU family COG1872
11Global regulator protein family
11ATP-dependent Clp protease adaptor protein ClpS
1113Domain of unknown function (DUF202)
11Fic/DOC family
11Phosphatidylserine decarboxylase
11114Paired amphipathic helix repeat
11FtsX-like permease family
11Uncharacterized ACR, YdiU/UPF0061 family
11114Calcium-dependent channel, 7TM region, putative phosphate
22228ERCC4 domain
1113Myosin N-terminal SH3-like domain
21115Proliferating cell nuclear antigen, C-terminal domain
11Transcription initiation factor IIA, gamma subunit
11S-adenosylmethionine synthetase, central domain
11S-adenosylmethionine synthetase, C-terminal domain
11114Iron/manganese superoxide dismutases, C-terminal domain
22228Transketolase, pyrimidine binding domain
21227Transketolase, C-terminal domain
11114Glucose-6-phosphate dehydrogenase, C-terminal domain
11Biotin carboxylase C-terminal domain
11Carbamoyl-phosphate synthase L chain, ATP binding domain
112Cytosol aminopeptidase family, N-terminal domain
112Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain
1113Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
2114Thiolase, C-terminal domain
2114Ubiquitin interaction motif
1113MIR domain
12216TGS domain
11D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
22Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
12216MIF4G domain
1113Clp amino terminal domain, pathogenicity island component
1113Ribonucleotide reductase, barrel domain
12227ATP synthase alpha/beta family, beta-barrel domain
2215Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
2215Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
112Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
11114SRP54-type protein, helical bundle domain
12216Sec63 Brl domain
11GRAM domain
11114Ulp1 protease family, C-terminal catalytic domain
112Iron only hydrogenase large subunit, C-terminal domain
22Bacterial regulatory protein, Fis family
112Mitosis protein DIM1
11114TATA box binding protein associated factor (TAF)
11114Signal peptide binding domain
11114Cyclin, C-terminal domain
346417HEAT repeat
11Late embryogenesis abundant protein
11114Haemolysin-III related
11114Glycerophosphoryl diester phosphodiesterase family
233210Conserved hypothetical ATP binding protein
233412NLI interacting factor-like phosphatase
11Nitronate monooxygenase
42219MBOAT, membrane-bound O-acyltransferase family
11Glutamate-cysteine ligase
1113CutA1 divalent ion tolerance protein
1113Phosphotyrosyl phosphate activator (PTPA) protein
112Biotin/lipoate A/B protein ligase family
12227DNA polymerase family B, exonuclease domain
2215SPX domain
112ABC1 family
1113EXS family
244414Anticodon binding domain
1113PBS lyase HEAT-like repeat
2215TB2/DP1, HVA22 family
31116Chitin synthase
11125Elongation factor Tu C-terminal domain
255416Elongation factor Tu domain 2
1225Triose-phosphate Transporter family
1113Ubiquitin fusion degradation protein UFD1
11114Transcription factor IIA, alpha/beta subunit
11114XRN 5'-3' exonuclease N-terminus
1113Uracil DNA glycosylase superfamily
11DNA polymerase type B, organellar and viral
11Non-repetitive/WGA-negative nucleoporin C-terminal
11114CPSF A subunit region
112LUC7 N_terminus
224TLC ATP/ADP transporter
112V-ATPase subunit C
11Cdc37 N terminal kinase binding
1113Rer1 family
1113Anaphase-promoting complex, subunit 10 (APC10)
11114mRNA capping enzyme
11215Eukaryotic phosphomannomutase
1113YEATS family
13318Endonuclease/Exonuclease/phosphatase family
112LEM3 (ligand-effect modulator 3) family / CDC50 family
11Legume-like lectin family
112SAC3/GANP family
1113Saccharopine dehydrogenase NADP binding domain
11FAD binding domain of DNA photolyase
11114NAD binding domain of 6-phosphogluconate dehydrogenase
11Nitrite/Sulfite reductase ferredoxin-like half domain
22217eRF1 domain 1
11114eRF1 domain 2
22228eRF1 domain 3
1113Putative GTP-binding controlling metal-binding
1113B3/4 domain
11114tRNA synthetase B5 domain
112Plectin/S10 domain
1113Structure-specific recognition protein (SSRP1)
1113Transcription initiation factor TFIID 23-30kDa subunit
1113Peptidase family C50
33outer membrane porin, OprD family
112EMG1/NEP1 methyltransferase
11Citrate transporter
11DNA directed RNA polymerase, 7 kDa subunit
11UPF0113 PUA domain
12216Uncharacterised protein family (UPF0160)
22Noc2p family
11114Ribosomal protein S5, C-terminal domain
112Hexokinase
22ADP-ribosylglycohydrolase
11114Elongation factor G, domain IV
1113TLC domain
11114Nuf2 family
11114HEC/Ndc80p family
22228Importin-beta N-terminal domain
112Cid1 family poly A polymerase
112Binding domain of DNA repair protein Ercc1 (rad10/Swi10)
112Rad4 transglutaminase-like domain
112RasGAP C-terminus
11114Translocation protein Sec62
11Spore germination protein
112Transcription initiation factor TFIID subunit A
11114Transcription factor Tfb2
112Transcription factor Tfb4
11YjeF-related protein N-terminus
11114RNA polymerase Rpb8
11114RNA polymerase Rpb5, N-terminal domain
112RNA polymerase Rpb4
12328SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397
11114YIF1
112Alg9-like mannosyltransferase family
11Sec61beta family
11114mRNA capping enzyme, C-terminal domain
11114Ribosomal protein L11, N-terminal domain
1113Ribosomal Proteins L2, C-terminal domain
2226tRNA synthetases class I (E and Q), anti-codon binding domain
11114Enolase, N-terminal domain
133310Tubulin C-terminal domain
11114Mnd1 HTH domain
11Flagellar hook capping protein - N-terminal region
112Trm112p-like protein
11AFG1-like ATPase
112Utp11 protein
1113Mpp10 protein
12216RNAse P Rpr2/Rpp21/SNM1 subunit domain
11114Ribosome biogenesis protein, C-terminal
1113Domain of unknown function (DUF382)
3317DNA polymerase alpha/epsilon subunit B
1113PSP
224Transport protein particle (TRAPP) component
11114Radical SAM superfamily
11114Ssl1-like
112Replication factor-A protein 1, N-terminal domain
112RNA recognition motif 2
1113ORMDL family
12216Possible Fer4-like domain in RNase L inhibitor, RLI
11Substrate binding domain of ABC-type glycine betaine transport system
11114Cell differentiation family, Rcd1-like
11Per1-like family
112Origin recognition complex subunit 2
11Nucleoporin autopeptidase
11Nup93/Nic96
11114Rad52/22 family double-strand break repair protein
1113Sybindin-like family
11Glycosyltransferase family 28 C-terminal domain
21115Eukaryotic and archaeal DNA primase, large subunit
11Mpv17 / PMP22 family
11114Dopey, N-terminal
11114
112Gamma tubulin complex component C-terminal
11Nucleolar RNA-binding protein, Nop10p family
11114Endoplasmic Reticulum Oxidoreductin 1 (ERO1)
1113Mre11 DNA-binding presumed domain
11114NOT2 / NOT3 / NOT5 family
1113Sof1-like domain
112Arv1-like family
11Phosphoesterase family
1113Mannosyltransferase (PIG-V)
11Signal peptide peptidase
11Protein of unknown function, DUF484
112Protein tyrosine phosphatase-like protein, PTPLA
13329Helicase associated domain (HA2)
112Gar1/Naf1 RNA binding region
344415Brix domain
11SWIRM domain
1113SWIM zinc finger
1113RINT-1 / TIP-1 family
12216PSP1 C-terminal conserved region
11114WD40 associated region in TFIID subunit, NTD2 domain
1113Family of unknown function (DUF572)
11114Der1-like family
22Plasma-membrane choline transporter
3339RNA polymerase Rpb2, domain 7
3328RNA polymerase Rpb2, domain 2
3339RNA polymerase beta subunit
11114U-box domain
3339RNA polymerase Rpb2, domain 3
3227RNA polymerase Rpb2, domain 4
2226RNA polymerase Rpb2, domain 5
1113lipin, N-terminal conserved region
11Region found in RelA / SpoT proteins
112Utp14 protein
1113TAFII55 protein conserved region
1113DNA ligase N terminus
1113ATP dependent DNA ligase C terminal region
11114hTAFII28-like protein conserved region
1113Ssu72-like protein
11114ASF1 like histone chaperone
1113Ribosomal protein S30
1124Erv1 / Alr family
2226Sec23/Sec24 zinc finger
2226Sec23/Sec24 trunk domain
13329Sec23/Sec24 helical domain
11Conserved region of Rad21 / Rec8 like protein
11N terminus of Rad21 / Rec8 like protein
12238Type III restriction enzyme, res subunit
21115CAF1 family ribonuclease
11114Mak16 protein C-terminal region
1113Yip1 domain
11114Fcf1
11114Poly(A) polymerase predicted RNA binding domain
11114Poly(A) polymerase central domain
11MED6 mediator sub complex component
1113Ribosome biogenesis regulatory protein (RRS1)
2222840S ribosome biogenesis protein Tsr1 and BMS1 C-terminal
11Siderophore-interacting protein
112CS domain
11114NMD3 family
233311RNA polymerase Rpb1, domain 3
1113RNA polymerase Rpb1, domain 7
1113RNA polymerase Rpb1, domain 6
233311RNA polymerase Rpb1, domain 1
233311RNA polymerase Rpb1, domain 5
233311RNA polymerase Rpb1, domain 4
112RNA polymerase Rpb1 C-terminal repeat
21115SGS domain
11Vesicle transport v-SNARE protein N-terminus
11ParE toxin of type II toxin-antitoxin system, parDE
1113NPL4 family, putative zinc binding region
1113NPL4 family
11114Dcp2, box A domain
11114Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis
11Aspartyl/Asparaginyl beta-hydroxylase
1113Helicase
11114Transcription elongation factor Elf1 like
21115Hypothetical methyltransferase
11114RNA polymerase Rpc34 subunit
11Nup53/35/40-type RNA recognition motif
11Methyltransferase small domain
112RNA pol II accessory factor, Cdc73 family, C-terminal
112XPA protein C-terminus
11114Fip1 motif
112MutS family domain IV
11Adenylate kinase, active site lid
22228MutS domain III
11114Peptidase M16 inactive domain
1113CSL zinc finger
11S-adenosyl-L-homocysteine hydrolase
11114Transcription initiation factor TFIID component TAF4 family
1113
1113La domain
12216CHY zinc finger
112Bap31/Bap29 transmembrane region
11114Mitotic checkpoint protein
112RNA polymerase III subunit RPC82
1113Scavenger mRNA decapping enzyme (DcpS) N-terminal