PFAM Domains • Chaetomidium fimeti CBS 168.71 v1.0
Annotations/GenomesAchstr1Chafi1Chagl_1Myche1Mychet1Spoth2Thiap1Thihy1Thite2TotalAnnotation Description
PFAMs
9,73410,4777,8656,9758,6696,9517,7207,2967,33773,024
11137 transmembrane receptor (rhodopsin family)
23277 transmembrane receptor (Secretin family)
475446394041465243408ATPase family associated with various cellular activities (AAA)
364442363738353336337ABC transporter
44444444436ATP synthase alpha/beta family, nucleotide-binding domain
161514141514131514130Elongation factor Tu GTP binding domain
141211131313121213113Helix-loop-helix DNA-binding domain
42333333327Hsp20/alpha crystallin family
11149912988888Hsp70 protein
89887899975KH domain
1111116SH2 domain
121123221121212223166SH3 domain
11109101091081087Actin
13419833829746741404Ankyrin repeat
123118PAN domain
88877787767ADP-ribosylation factor family
211918161816161422160Eukaryotic aspartyl protease
44344444435Cyclic nucleotide-binding domain
1111111119Cytochrome c
11114Double-stranded RNA binding motif
441719317171620117EF hand
11111164Fe-4S binding domain
12321233219Fibronectin type III domain
22222212116Globin
811107481110978Glutathione S-transferase, C-terminal domain
1111111119Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
54665556648Homeodomain
32344422327lactate/malate dehydrogenase, NAD binding domain
44555544440Myosin head (motor domain)
8010483535552634959598Cytochrome P450
1551721171141391171011131341,162Protein kinase domain
131516131112151213120Pyridine nucleotide-disulphide oxidoreductase
302623242524272724230Ras family
161012121111131311109Response regulator receiver domain
45333322126RNase H
535561605558626362529RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
1074111Reverse transcriptase (RNA-dependent DNA polymerase)
44323122324Copper/zinc superoxide dismutase (SODC)
22222222218Iron/manganese superoxide dismutases, alpha-hairpin domain
2020138118141110115Subtilase family
585647404442503542414Sugar (and other) transporter
131311111211111212106Thioredoxin
11111117Trypsin
44344444435Tubulin/FtsZ family, GTPase domain
11521267227von Willebrand factor type A domain
242551572153555760403Zinc finger, C2H2 type
353240441404240247Zinc finger, C3HC4 type (RING finger)
224764138127101Zinc knuckle
22232222219Protein-tyrosine phosphatase
939784605656916294693short chain dehydrogenase
405051322732503342357Zinc-binding dehydrogenase
56555555546Thiolase, N-terminal domain
203829171718151219185Beta-ketoacyl synthase, N-terminal domain
345535555402Fe-2S iron-sulfur cluster binding domain
1111111119Papain family cysteine protease
1111111119Enolase, C-terminal TIM barrel domain
77Cytochrome C and Quinol oxidase polypeptide I
1110999988881Glutamine amidotransferase class-I
1091010101010101089TCP-1/cpn60 chaperonin family
44444444436Glutamine synthetase, catalytic domain
22222222218Triosephosphate isomerase
182013141914141512139E1-E2 ATPase
88778888971Core histone H2A/H2B/H3/H4
577778118464Alpha amylase, catalytic domain
21222212216Phorbol esters/diacylglycerol binding domain (C1 domain)
77899887770Bacterial transferase hexapeptide (six repeats)
57535355442tRNA synthetases class I (I, L, M and V)
910568576763Cyclin, N-terminal domain
1117181010911714107Carboxylesterase family
44444444436DNA polymerase family B
56566566550ATP synthase subunit C
55344465440Peroxidase
7131155564662Beta-lactamase
33233333326C-5 cytosine-specific DNA methylase
232124251824232629213Calcineurin-like phosphoesterase
10108788661376Cellulase (glycosyl hydrolase family 5)
88777787867tRNA synthetases class II (D, K and N)
353936363537373635326Mitochondrial carrier protein
141813121412151512125Aminotransferase class I and II
45994811111071Phosphoribosyl transferase domain
10101010101010101090Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111119Phosphoglycerate kinase
22222222218Ribosomal protein S4/S9 N-terminal domain
22222122217Ribosomal protein S12/S23
112Bacterial regulatory helix-turn-helix proteins, AraC family
111111118Chaperonin 10 Kd subunit
10913131013111411104C2 domain
881417817181815123PH domain
111578158108991bZIP transcription factor
151512131413111015118Aldehyde dehydrogenase family
147152106116971011421201221,103Fungal Zn(2)-Cys(6) binuclear cluster domain
212518212121222222193Cytochrome b5-like Heme/Steroid binding domain
33222232221Oxidoreductase molybdopterin binding domain
111514121313191414125Oxidoreductase NAD-binding domain
283629232623212726239SNF2 family N-terminal domain
22222212217Ribosomal protein S7p/S5e
222220202120202120186Ubiquitin-conjugating enzyme
65655555547Isocitrate/isopropylmalate dehydrogenase
2222221215Ribosomal Proteins L2, RNA binding domain
1111111119Hsp90 protein
22222222218Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111119Dihydrofolate reductase
29721263335Chitin recognition protein
1111111119Cysteine-rich secretory protein family
1111111119Ribosomal protein S3, C-terminal domain
23323212119Cupin
33332333225Annexin
1111111119Eukaryotic-type carbonic anhydrase
11111112110Chalcone and stilbene synthases, N-terminal domain
333333333272-oxoacid dehydrogenases acyltransferase (catalytic domain)
32322243122Catalase
11111122111Disintegrin
36113216UDP-glucoronosyl and UDP-glucosyl transferase
67766677759Aminotransferase class-III
22222222218Ribosomal protein S19
1111111119DNA gyrase B
33544454335Thiamine pyrophosphate enzyme, central domain
33233333326Lyase
22222222218Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1113Ferritin-like domain
1111111119Adenylate and Guanylate cyclase catalytic domain
1111111119ATP synthase delta (OSCP) subunit
21111111110Orotidine 5'-phosphate decarboxylase / HUMPS family
1111111119Indole-3-glycerol phosphate synthase
1111111119Aromatic amino acid lyase
11111211110Pyruvate kinase, barrel domain
109111111101081090Kinesin motor domain
272625232524262626228DnaJ domain
141413141413141414124Proteasome subunit
12111132113Major intrinsic protein
1111111119ATP synthase
21111122112Glycosyl hydrolase family 1
11111111193'5'-cyclic nucleotide phosphodiesterase
1111111119Profilin
22112111112Ribosomal protein L22p/L17e
22222222218Ribosomal protein L14p/L23e
98101010111111888Ubiquitin family
55355355440Cofilin/tropomyosin-type actin-binding protein
3322322222114-3-3 protein
22542465232Alkaline phosphatase
33333333226Zinc carboxypeptidase
232218141614271923176Aldo/keto reductase family
11917171117141616128Myb-like DNA-binding domain
44444444436Forkhead domain
2333112Glycosyl hydrolases family 32 N-terminal domain
22112111112Ribosomal protein L16p/L10e
22222222218Ribosomal protein S14p/S29e
44344444435FKBP-type peptidyl-prolyl cis-trans isomerase
1111111119Glutathione peroxidase
12222211
76666686657Flavodoxin
1111111119Calreticulin family
121814910912910103Common central domain of tyrosinase
910789889775Aminotransferase class-V
1111111119Ribonucleotide reductase, small chain
474446394439394338379DEAD/DEAH box helicase
768085717272747973682Helicase conserved C-terminal domain
1111111119EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22222222218Ribosomal protein L23
12122211113Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11222222216Ribosomal protein L5
67555566550Pyridoxal-dependent decarboxylase conserved domain
33223222221Citrate synthase, C-terminal domain
65555655547GHMP kinases N terminal domain
55455555544Biotin carboxylase, N-terminal domain
1111111119Tryptophan synthase alpha chain
91291010101110889Pyridoxal-phosphate dependent enzyme
152013141413181414135NUDIX domain
55765666551pfkB family carbohydrate kinase
41122231723Glycosyl hydrolases family 28
211318Luciferase-like monooxygenase
22222222218Ribosomal protein L3
22222222218Ribosomal protein L11, RNA binding domain
121313121211161312114Histidine phosphatase superfamily (branch 1)
1111111119Thymidylate synthase
1122219Lipoxygenase
44444444436ATP synthase alpha/beta chain, C terminal domain
55455554543Calponin homology (CH) domain
31543444432Glutamine amidotransferases class-II
22222222117Ribosomal protein S15
11114Thaumatin family
22211123115Fructose-1-6-bisphosphatase, N-terminal domain
1111111119Ribonucleotide reductase, all-alpha domain
22222222218Ribosomal protein S2
22222222218SRF-type transcription factor (DNA-binding and dimerisation domain)
85476687859GATA zinc finger
121118191019201421144Amino acid permease
45434343232Prolyl oligopeptidase family
22122222217Ribosomal protein L30p/L7e
86555678454Histidine phosphatase superfamily (branch 2)
1111111119Respiratory-chain NADH dehydrogenase, 30 Kd subunit
44644444438Aconitase family (aconitate hydratase)
487444105652Glycosyl hydrolase family 10
32121222217Glycosyl hydrolases family 17
22222222218Ribosomal protein S5, N-terminal domain
1111111119Nucleoside diphosphate kinase
112Tetraspanin family
22222122116Ribosomal protein S10p/S20e
33343444432Arrestin (or S-antigen), N-terminal domain
1111111119Phosphoglucose isomerase
1111111119Carbohydrate phosphorylase
1111111119SecY translocase
1111111119Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222122217Ribosomal protein L6
64433466440Polyprenyl synthetase
44444444436Hexokinase
15199812899897Dynamin family
22222222218Transcription factor TFIID (or TATA-binding protein, TBP)
43331455432Rieske [2Fe-2S] domain
11Phytochrome region
3216Proton-conducting membrane transporter
77777776661Biotin-requiring enzyme
1111111119Phosphofructokinase
22222222218Ribosomal protein S17
1111111119Hydroxymethylglutaryl-coenzyme A reductase
33333333327FGGY family of carbohydrate kinases, N-terminal domain
111115Sodium:dicarboxylate symporter family
7107988108774Enoyl-CoA hydratase/isomerase
22222222218Ribosomal protein S9/S16
22222222218Transcription factor TFIIB repeat
58677876660Cytidine and deoxycytidylate deaminase zinc-binding region
11211122213Molybdopterin oxidoreductase
9828887813796Chromo (CHRromatin Organisation MOdifier) domain
44433344332Phosphatidylinositol-specific phospholipase C, Y domain
55434344335Phosphatidylinositol-specific phospholipase C, X domain
76667677759D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22222222218Malic enzyme, N-terminal domain
111115PEP-utilising enzyme, mobile domain
111111112106-phosphogluconate dehydrogenase, C-terminal domain
10986661371176Multicopper oxidase
710989999979WW domain
21111111110Ribosomal RNA adenine dimethylase
112Yeast PIR protein repeat
111107113101103106115128108992WD domain, G-beta repeat
44443455538Heavy-metal-associated domain
54333335433Adenylate kinase
22122222116Phosphoglucomutase/phosphomannomutase, C-terminal domain
22222222117Ribosomal protein S8
22112111213Ribosomal protein S11
45444444437LIM domain
36225221326Regulator of chromosome condensation (RCC1) repeat
22222122217Ribosomal protein S13/S18
22222232219chorismate binding enzyme
3333333332760s Acidic ribosomal protein
34543444435Prenyltransferase and squalene oxidase repeat
33664656544Protein kinase C terminal domain
1111111119Single-strand binding protein family
11Type II/IV secretion system protein
1111111119S-adenosylmethionine synthetase, N-terminal domain
898997107875Bromodomain
99877776868Acyl-CoA dehydrogenase, C-terminal domain
131314141314141514124Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
212319Ribonuclease T2 family
33233333326HSF-type DNA-binding
33223222221SRP54-type protein, GTPase domain
1111111119Urease alpha-subunit, N-terminal domain
75645544545Serine carboxypeptidase
88888988873Phosphatidylinositol 3- and 4-kinase
11111122111Transketolase, thiamine diphosphate binding domain
59988873562Glycosyl hydrolases family 11
66566655550Inositol monophosphatase family
44444344334Glutaredoxin
22222233220Isocitrate lyase family
22322222219Serine hydroxymethyltransferase
31111111111Iron-containing alcohol dehydrogenase
22122222217Ribosomal protein L10
12333332222KOW motif
11114Ribosomal protein L34
112Ribosomal protein L33
33133222322RF-1 domain
22122322319Sodium:solute symporter family
1111111119Imidazoleglycerol-phosphate dehydratase
1111111119DNA polymerase family A
1111111119IMP dehydrogenase / GMP reductase domain
1111111119Glucose-6-phosphate dehydrogenase, NAD binding domain
66665658553Protein phosphatase 2C
33223222221Nucleotidyl transferase
33333322426Carbonic anhydrase
1111111119Phosphoribulokinase / Uridine kinase family
57655556549Fatty acid desaturase
66666666654MutS domain V
1111111119Delta-aminolevulinic acid dehydratase
32111132115Arginase family
66666666654MCM P-loop domain
22112111112Squalene/phytoene synthase
13109811810101089FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
295145303031333327309AMP-binding enzyme
33333333428G-protein alpha subunit
111311109101210995HMG (high mobility group) box
1278768109875His Kinase A (phospho-acceptor) domain
32232333324Armadillo/beta-catenin-like repeat
141827221421262524191Tetratricopeptide repeat
22222233422Ion transport protein
1111111119DNA gyrase/topoisomerase IV, subunit A
76810810108774BRCA1 C Terminus (BRCT) domain
588667109665Glycosyl transferases group 1
22342333325Glycosyl transferase family 2
111111129SAM domain (Sterile alpha motif)
1111111119linker histone H1 and H5 family
1111111119Ribosomal protein L7/L12 C-terminal domain
3564455638Pectate lyase
23222231118ribonuclease
1111111119Urease, gamma subunit
34445433333CoA-ligase
264625152316131217193Phosphopantetheine attachment site
44333333228Formyl transferase
99889898876Metallopeptidase family M24
32111641615161598Leucine Rich Repeat
6122622525292426175alpha/beta hydrolase fold
33333333327RNA polymerase Rpb2, domain 6
44444444436PB1 domain
22222222218Staphylococcal nuclease homologue
1212991291091092Rab-GTPase-TBC domain
1111111119Tudor domain
1111111119WH1 domain
43133333326Zinc finger, ZZ type
11121222214HRDC domain
77787898970CBS domain
22222122217Ribosomal protein L13
22222222218Ribosomal protein L4/L1 family
1111111119Clp protease
55245335335S1 RNA binding domain
1111111119HIUase/Transthyretin family
22222223219AhpC/TSA family
44444444436tRNA synthetases class I (W and Y)
111115UvrD/REP helicase N-terminal domain
911469556661Rhodanese-like domain
22222222218Universal stress protein family
212422282028332931236Acetyltransferase (GNAT) family
1111111119SecE/Sec61-gamma subunits of protein translocation complex
1111111119C-terminal regulatory domain of Threonine dehydratase
22222222218AIR synthase related protein, N-terminal domain
8998788111078tRNA synthetase class II core domain (G, H, P, S and T)
1111111119SpoU rRNA Methylase family
23212222218Tetrapyrrole (Corrin/Porphyrin) Methylases
1111111119Glycosyl transferase family, a/b domain
111115PDZ domain
21112211213Class II Aldolase and Adducin N-terminal domain
11Adenoviral fibre protein (repeat/shaft region)
44444444436Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
55454454541Fes/CIP4, and EFC/F-BAR homology domain
22553555436IQ calmodulin-binding motif
22222222218Phosphoinositide 3-kinase family, accessory domain (PIK domain)
33562676644Phospholipase D Active site motif
64116111122Regulator of G protein signaling domain
44444444436GTPase-activator protein for Ras-like GTPase
44444444436RasGEF domain
44444444436RasGEF N-terminal motif
10910101010891086RhoGAP domain
66566665652RhoGEF domain
55334333534SPRY domain
33333333327RNA polymerase Rpb1, domain 2
23222324222Guanylate kinase
34534343433Gelsolin repeat
338961166961UBA/TS-N domain
131214151316151615129PHD-finger
1111111119GGL domain
66666666553HECT-domain (ubiquitin-transferase)
12231333220Helix-hairpin-helix motif
1111111119MSP (Major sperm protein) domain
34354544436Ribonuclease III domain
43234333328Region in Clathrin and VPS
33333333327RanBP1 domain
12122122215PPIC-type PPIASE domain
32233233324Zn-finger in Ran binding protein and others
891515812152017119Zinc finger C-x8-C-x5-C-x3-H type (and similar)
22222222218Poly(ADP-ribose) polymerase catalytic domain
11111121110Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
1194339939464746289F-box domain
1111111119Elongation factor 1 gamma, conserved domain
23243233325Calpain family cysteine protease
12222110Copper fist DNA binding domain
56666655651CRAL/TRIO domain
1016778957574BTB/POZ domain
22122221216Ricin-type beta-trefoil lectin domain
1111111119Inhibitor of Apoptosis domain
33333333327Voltage gated chloride channel
24322232222Caspase domain
55161041114101085GDSL-like Lipase/Acylhydrolase
1111111119Poly-adenylate binding protein, unique domain
1113POLO box duplicated region
192420202020181619176ABC transporter transmembrane region
361138Integrase core domain
56555566548FAD binding domain
72115881067486Condensation domain
1111111119S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1111111119HAMP domain
22222222218ribosomal L5P family C-terminus
65546444644Insulinase (Peptidase family M16)
34333333328Dehydrogenase E1 component
1111111119Lumazine binding domain
56566657551Elongation factor G C-terminus
45544444438HMGL-like
44444444436DnaJ central domain
11Sulfotransferase domain
32222222320Starch binding domain
331