PFAM Domains • Amylostereum chailletii DWAch2 v1.0
Annotations/GenomesAmycha1Clapy1Hetan2Lopni1Ricme1Scysp1_1Stehi1Varmin1TotalAnnotation Description
PFAMs
10,0148,4877,7119,9039,84710,3189,0059,16674,451
3946424747564952378ATPase family associated with various cellular activities (AAA)
4042325756424835352ABC transporter
4444444432ATP synthase alpha/beta family, nucleotide-binding domain
1716161414161516124Elongation factor Tu GTP binding domain
131212111310131195Helix-loop-helix DNA-binding domain
7106121455766Hsp20/alpha crystallin family
151510127910785Hsp70 protein
7878888862KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
111115SH2 domain
1628263336182915201SH3 domain
111111121111121291Actin
632515673273412291Ankyrin repeat
77710987762ADP-ribosylation factor family
3430283940303630267Eukaryotic aspartyl protease
3333334325Cyclic nucleotide-binding domain
2112211111Cytochrome c
12561312611570Double-stranded RNA binding motif
219151819217193EF hand
1122174Fe-4S binding domain
111115Fibronectin type III domain
11Globin
281114138161082Glutathione S-transferase, C-terminal domain
111111118Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11Hemopexin
71089869663Homeodomain
112Laminin EGF domain
2222222216lactate/malate dehydrogenase, NAD binding domain
112Lipocalin / cytosolic fatty-acid binding protein family
5556677647Myosin head (motor domain)
1782721341831751612041671,474Cytochrome P450
2071951321922041871571401,414Protein kinase domain
1522152120102211136Pyridine nucleotide-disulphide oxidoreductase
2526222524302527204Ras family
987111210141081Response regulator receiver domain
71191181113474RNase H
6175678080676557552RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
10111Reverse transcriptase (RNA-dependent DNA polymerase)
111111219Copper/zinc superoxide dismutase (SODC)
2232222217Iron/manganese superoxide dismutases, alpha-hairpin domain
2335231421264Subtilase family
4139324441493942327Sugar (and other) transporter
10141012131111889Thioredoxin
5566655543Tubulin/FtsZ family, GTPase domain
53332521von Willebrand factor type A domain
1562896061205514376Zinc finger, C2H2 type
77258888221568392Zinc finger, C3HC4 type (RING finger)
121415426236276268Zinc knuckle
2222262220Protein-tyrosine phosphatase
96120581611589313691913short chain dehydrogenase
4037378180427851446Zinc-binding dehydrogenase
5555555742Thiolase, N-terminal domain
59465118654Beta-ketoacyl synthase, N-terminal domain
13433131192Fe-2S iron-sulfur cluster binding domain
111111118Enolase, C-terminal TIM barrel domain
9777787860Glutamine amidotransferase class-I
101010101010101080TCP-1/cpn60 chaperonin family
112ATP synthase A chain
3334434327Glutamine synthetase, catalytic domain
121111119Triosephosphate isomerase
2214141515171118126E1-E2 ATPase
1419161415161613123Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
88766813763Alpha amylase, catalytic domain
5657666445Phorbol esters/diacylglycerol binding domain (C1 domain)
3343324224Bacterial transferase hexapeptide (six repeats)
4333353428tRNA synthetases class I (I, L, M and V)
1412101515121012100Cyclin, N-terminal domain
2526193937353233246Carboxylesterase family
4434444431DNA polymerase family B
3333333324ATP synthase subunit C
991219192275102Peroxidase
87289211249Beta-lactamase
6446686444C-5 cytosine-specific DNA methylase
2528233133232820211Calcineurin-like phosphoesterase
1412111313181516112Cellulase (glycosyl hydrolase family 5)
4555566541tRNA synthetases class II (D, K and N)
3637363838393736297Mitochondrial carrier protein
1213141313142014113Aminotransferase class I and II
4677745444Phosphoribosyl transferase domain
1313131313151313106Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111118Phosphoglycerate kinase
2222222216Ribosomal protein S4/S9 N-terminal domain
3222222217Ribosomal protein S12/S23
22Bacterial regulatory helix-turn-helix proteins, AraC family
111111219Chaperonin 10 Kd subunit
1215191514131712117C2 domain
102022212012208133PH domain
94554127854bZIP transcription factor
2223141414172222148Aldehyde dehydrogenase family
4970589998538547559Fungal Zn(2)-Cys(6) binuclear cluster domain
2224232120252522182Cytochrome b5-like Heme/Steroid binding domain
1322225219Oxidoreductase molybdopterin binding domain
68108978763Oxidoreductase NAD-binding domain
2626212422272723196SNF2 family N-terminal domain
2222222216Ribosomal protein S7p/S5e
2321212121232121172Ubiquitin-conjugating enzyme
65105555546Isocitrate/isopropylmalate dehydrogenase
2222222216Ribosomal Proteins L2, RNA binding domain
2222222216Hsp90 protein
2223322218Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111118Dihydrofolate reductase
1113Chitin recognition protein
2111143316Cysteine-rich secretory protein family
111111118Ribosomal protein S3, C-terminal domain
97312146657Cupin
34357623332-oxoacid dehydrogenases acyltransferase (catalytic domain)
3233323221Catalase
111111118Disintegrin
312211111UDP-glucoronosyl and UDP-glucosyl transferase
5555556541Aminotransferase class-III
2222232217Ribosomal protein S19
111111118DNA gyrase B
2222222216Thiamine pyrophosphate enzyme, central domain
3333333324Lyase
111111219Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
111111219Adenylate and Guanylate cyclase catalytic domain
111111118ATP synthase delta (OSCP) subunit
111111118Orotidine 5'-phosphate decarboxylase / HUMPS family
2113431217Indole-3-glycerol phosphate synthase
2232423321Aromatic amino acid lyase
111111118Pyruvate kinase, barrel domain
121099998975Kinesin motor domain
2930333431333428252DnaJ domain
1614141515151414117Proteasome subunit
5739985753Major intrinsic protein
111112119ATP synthase
3321123318Glycosyl hydrolase family 1
1111111183'5'-cyclic nucleotide phosphodiesterase
121111119Profilin
2121122213Ribosomal protein L22p/L17e
2322232117Ribosomal protein L14p/L23e
1917191617101513126Ubiquitin family
4655566542Cofilin/tropomyosin-type actin-binding protein
222243221914-3-3 protein
12232212Alkaline phosphatase
1111122110Zinc carboxypeptidase
4549427574456441435Aldo/keto reductase family
812121313811784Myb-like DNA-binding domain
555131355758Forkhead domain
1111116Glycosyl hydrolases family 32 N-terminal domain
2111121211Ribosomal protein L16p/L10e
2322221216Ribosomal protein S14p/S29e
3437744436FKBP-type peptidyl-prolyl cis-trans isomerase
2222210
476101035550Flavodoxin
11Protamine P1
11Tropomyosin
111211119Calreticulin family
5537827239Common central domain of tyrosinase
7676678754Aminotransferase class-V
2223725225Ribonucleotide reductase, small chain
8154436451585445450DEAD/DEAH box helicase
10493779890879172712Helicase conserved C-terminal domain
11111117Fructose-bisphosphate aldolase class-I
111111219EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2312212215Ribosomal protein L23
111111118Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111111118Ribosomal protein L5
4453345533Pyridoxal-dependent decarboxylase conserved domain
7333343430Citrate synthase, C-terminal domain
5655555541GHMP kinases N terminal domain
6666776650Biotin carboxylase, N-terminal domain
111111118Tryptophan synthase alpha chain
88899810969Pyridoxal-phosphate dependent enzyme
1516171615151615125NUDIX domain
4445565538pfkB family carbohydrate kinase
9281313917677Glycosyl hydrolases family 28
2222222216Ribosomal protein L3
2122222215Ribosomal protein L11, RNA binding domain
77877810862Histidine phosphatase superfamily (branch 1)
111111129Thymidylate synthase
4444444432ATP synthase alpha/beta chain, C terminal domain
3544444230Calponin homology (CH) domain
2555526232Glutamine amidotransferases class-II
2226732226Ribosomal protein S15
3241313129965Thaumatin family
1411111111Fructose-1-6-bisphosphatase, N-terminal domain
1111212110Ribonucleotide reductase, all-alpha domain
2322221216Ribosomal protein S2
2222223217SRF-type transcription factor (DNA-binding and dimerisation domain)
910915161412893GATA zinc finger
7331925256309154Amino acid permease
1095121069768Prolyl oligopeptidase family
3112221214Ribosomal protein L30p/L7e
1114101212914991Histidine phosphatase superfamily (branch 2)
111111118Respiratory-chain NADH dehydrogenase, 30 Kd subunit
5636654439Aconitase family (aconitate hydratase)
4325656435Glycosyl hydrolase family 10
1112211110Glycosyl hydrolases family 17
2221122214Ribosomal protein S5, N-terminal domain
2222222216Nucleoside diphosphate kinase
322113214Tetraspanin family
11Galactoside-binding lectin
2312222216Ribosomal protein S10p/S20e
7235544333Arrestin (or S-antigen), N-terminal domain
11121121120Phosphoglucose isomerase
111111118Carbohydrate phosphorylase
1112221212SecY translocase
111111118Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222216Ribosomal protein L6
7354438337Polyprenyl synthetase
2222222216Hexokinase
117777127866Dynamin family
111111219Transcription factor TFIID (or TATA-binding protein, TBP)
3344435430Rieske [2Fe-2S] domain
1113Phytochrome region
11Proton-conducting membrane transporter
788810107866Biotin-requiring enzyme
111111118Phosphofructokinase
1222232216Ribosomal protein S17
1112111210Hydroxymethylglutaryl-coenzyme A reductase
3344433327FGGY family of carbohydrate kinases, N-terminal domain
9788898764Enoyl-CoA hydratase/isomerase
2222222216Ribosomal protein S9/S16
2234432222Transcription factor TFIIB repeat
5779967656Cytidine and deoxycytidylate deaminase zinc-binding region
111111118Molybdopterin oxidoreductase
8621121489684Chromo (CHRromatin Organisation MOdifier) domain
2222222216Phosphatidylinositol-specific phospholipase C, Y domain
2222222317Phosphatidylinositol-specific phospholipase C, X domain
7866669654D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2333333323Malic enzyme, N-terminal domain
1111112196-phosphogluconate dehydrogenase, C-terminal domain
1617202223122112143Multicopper oxidase
8981416811983WW domain
3222222217Ribosomal RNA adenine dimethylase
1401391261581701661511451,195WD domain, G-beta repeat
4444444432Heavy-metal-associated domain
3363333327Adenylate kinase
2111121211Phosphoglucomutase/phosphomannomutase, C-terminal domain
2121121212Ribosomal protein S8
2212321215Ribosomal protein S11
6657766649LIM domain
55Matrixin
4423424427Regulator of chromosome condensation (RCC1) repeat
2222221215Ribosomal protein S13/S18
2322222217chorismate binding enzyme
333554322860s Acidic ribosomal protein
4444444331Prenyltransferase and squalene oxidase repeat
5768868553Protein kinase C terminal domain
111111118Single-strand binding protein family
111111118S-adenosylmethionine synthetase, N-terminal domain
111017121110101192Bromodomain
9887799764Acyl-CoA dehydrogenase, C-terminal domain
1414131313131414108Ubiquitin carboxyl-terminal hydrolase
11111117Ribosomal protein L36
3223323321Ribonuclease T2 family
5445544435HSF-type DNA-binding
2322222217SRP54-type protein, GTPase domain
111111118Urease alpha-subunit, N-terminal domain
1714102624131411129Serine carboxypeptidase
9888998867Phosphatidylinositol 3- and 4-kinase
2222223217Transketolase, thiamine diphosphate binding domain
211127Glycosyl hydrolases family 11
112WHEP-TRS domain
2222232217Inositol monophosphatase family
4447544436Glutaredoxin
2534424226Isocitrate lyase family
111111118Serine hydroxymethyltransferase
3223365428Iron-containing alcohol dehydrogenase
2222222216Ribosomal protein L10
4454435433KOW motif
1111221110Ribosomal protein L34
1113Ribosomal protein L33
3333333324RF-1 domain
2333324222Sodium:solute symporter family
1112211110Imidazoleglycerol-phosphate dehydratase
111111118DNA polymerase family A
111112119IMP dehydrogenase / GMP reductase domain
111111118Glucose-6-phosphate dehydrogenase, NAD binding domain
99101110710874Protein phosphatase 2C
4433224325Nucleotidyl transferase
5358834541Carbonic anhydrase
111111118Phosphoribulokinase / Uridine kinase family
1312119811151190Fatty acid desaturase
6666666648MutS domain V
111111118Delta-aminolevulinic acid dehydratase
6436755541Arginase family
6667666649MCM P-loop domain
2112222214Squalene/phytoene synthase
914105146101013163FHA domain
3926323432394129272AMP-binding enzyme
1115121412121514105G-protein alpha subunit
2616192121182215158HMG (high mobility group) box
55388810653His Kinase A (phospho-acceptor) domain
4444423328Armadillo/beta-catenin-like repeat
1348355261193315276Tetratricopeptide repeat
3423333425Ion transport protein
111111118DNA gyrase/topoisomerase IV, subunit A
811999910570BRCA1 C Terminus (BRCT) domain
4666666545Glycosyl transferases group 1
3445524431Glycosyl transferase family 2
211116SAM domain (Sterile alpha motif)
4422334325linker histone H1 and H5 family
1111121210Ribosomal protein L7/L12 C-terminal domain
125514119Pectate lyase
212222112ribonuclease
111111118Urease, gamma subunit
4333333325CoA-ligase
87776159867Phosphopantetheine attachment site
2222222216Formyl transferase
111010111112131290Metallopeptidase family M24
214151313217379Leucine Rich Repeat
73431514995011242alpha/beta hydrolase fold
3333333324RNA polymerase Rpb2, domain 6
5455554538PB1 domain
3222222217Staphylococcal nuclease homologue
12910111013101489Rab-GTPase-TBC domain
111111118Tudor domain
2224332220WH1 domain
3454433329Zinc finger, ZZ type
111111118HRDC domain
8999978867CBS domain
2222222216Ribosomal protein L13
2222222216Ribosomal protein L4/L1 family
111111118Clp protease
4344444330S1 RNA binding domain
11111117HIUase/Transthyretin family
4444445433AhpC/TSA family
4444444432tRNA synthetases class I (W and Y)
3221131215UvrD/REP helicase N-terminal domain
8445585847Rhodanese-like domain
2222222216Universal stress protein family
2040264547193913249Acetyltransferase (GNAT) family
111111118SecE/Sec61-gamma subunits of protein translocation complex
111111118C-terminal regulatory domain of Threonine dehydratase
3222223218AIR synthase related protein, N-terminal domain
5666656545tRNA synthetase class II core domain (G, H, P, S and T)
11Phage integrase family
2222222216Tetrapyrrole (Corrin/Porphyrin) Methylases
4111121213Glycosyl transferase family, a/b domain
2131114114Class II Aldolase and Adducin N-terminal domain
5332242425Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
4553355434Fes/CIP4, and EFC/F-BAR homology domain
2458624233IQ calmodulin-binding motif
2222222216Phosphoinositide 3-kinase family, accessory domain (PIK domain)
1334413221Phospholipase D Active site motif
4113131216Regulator of G protein signaling domain
5444445434GTPase-activator protein for Ras-like GTPase
88791068864RasGEF domain
6888859759RasGEF N-terminal motif
1213121413151412105RhoGAP domain
1413131313111213102RhoGEF domain
4444444432SPRY domain
4344383332RNA polymerase Rpb1, domain 2
111112119Guanylate kinase
4445545435Gelsolin repeat
687101078763UBA/TS-N domain
1415151919161914131PHD-finger
2211122213GGL domain
5755555542HECT-domain (ubiquitin-transferase)
111121119Helix-hairpin-helix motif
111111129MSP (Major sperm protein) domain
378101137453Ribonuclease III domain
5223342425Region in Clathrin and VPS
3323332322RanBP1 domain
2223333220PPIC-type PPIASE domain
3233224120Zn-finger in Ran binding protein and others
1628202327162511166Zinc finger C-x8-C-x5-C-x3-H type (and similar)
131117B-box zinc finger
2424211328Poly(ADP-ribose) polymerase catalytic domain
1222221214Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
292546332532423135171,170F-box domain
111111118Elongation factor 1 gamma, conserved domain
1121116114Calpain family cysteine protease
2222222216Copper fist DNA binding domain
7767776754CRAL/TRIO domain
7434204848294327323BTB/POZ domain
119844128Ricin-type beta-trefoil lectin domain
111111118Inhibitor of Apoptosis domain
3333333425Voltage gated chloride channel
3612114455363943276Caspase domain
7691717610678GDSL-like Lipase/Acylhydrolase
111111118Poly-adenylate binding protein, unique domain
111111118POLO box duplicated region
1623113333192815178ABC transporter transmembrane region
473353Integrase core domain
3344334327FAD binding domain
111521213Condensation domain
111111118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
1311123113HAMP domain
2222221215ribosomal L5P family C-terminus
5556655643Insulinase (Peptidase family M16)
4444454433Dehydrogenase E1 component
111111118Lumazine binding domain
6766677752Elongation factor G C-terminus
6456645541HMGL-like
4444434431DnaJ central domain
3632235226Starch binding domain
3222231217Ribosomal protein L1p/L10e family
10566894856Cation transporting ATPase, C-terminus
1087891061068Cation transporter/ATPase, N-terminus
1111131110dUTPase
6535554437Aconitase C-terminal domain
3333333324Amino acid kinase family
2111131111N-(5'phosphoribosyl)anthranilate (PRA) isomerase
39355126346Acyl transferase domain
111111118Urease beta subunit
2233342221Dihydrodipicolinate synthetase family
2033283233163016208haloacid dehalogenase-like hydrolase
1221112111Glycosyl hydrolases family 2
13791614171311100Glycosyl hydrolases family 18
111111118Proliferating cell nuclear antigen, N-terminal domain
112Translation initiation factor IF-3, C-terminal domain
111111118Adenylosuccinate synthetase
111111118Asparaginase, N-terminal
3233323322Peptidase S24-like
11111117Inorganic pyrophosphatase
1445331261259Glycosyl hydrolases family 16
41453343238Glycosyl hydrolases family 15
1324123939312314195NADH:flavin oxidoreductase / NADH oxidase family
1111121193-hydroxyacyl-CoA dehydrogenase, C-terminal domain
4245534431Glycosyl hydrolase family 20, catalytic domain
7666666649HhH-GPD superfamily base excision DNA repair protein
111112119AIR carboxylase
5147343735415240337GMC oxidoreductase
2222233218Asparagine synthase
1123172124201713146Fungal cellulose binding domain
7666666750Septin
211111119EF-1 guanine nucleotide exchange domain
111111118Homoserine dehydrogenase
4364455435Flavin-binding monooxygenase-like
3433334326tRNA synthetases class I (E and Q), catalytic domain
111111118tRNA synthetases class I (R)
6667777551XPG N-terminal domain
89911101313881Metallo-beta-lactamase superfamily
12317F5/8 type C domain
4464445435Choline/Carnitine o-acyltransferase
111111118Putative esterase
111111118Glycosyl hydrolase family 9
111111118Ferrochelatase
2222222216Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
111111118Arginosuccinate synthase
111111118Electron transfer flavoprotein FAD-binding domain
3333333324RNB domain
61433410334Dioxygenase
5444464536CNH domain
2222221215Diacylglycerol kinase catalytic domain
1219131414131011106Dual specificity phosphatase, catalytic domain
111112119MyTH4 domain
3234522122P21-Rho-binding domain
1312111212121513100PX domain
2225623325Ras association (RalGDS/AF-6) domain
4443354431UBX domain
5555465540VHS domain
111111118Phosphoinositide 3-kinase C2
2222222317DAHP synthetase I family
54