PFAM Domains • Byssothecium circinans CBS 675.92 v1.0
Annotations/GenomesAmnli1Bysci1Karrh1Lenfl1Melpu1Plesi1Spofi1Trepe1TotalAnnotation Description
PFAMs
9,4209,8309,56610,23510,4998,7517,24510,38275,928
11137 transmembrane receptor (rhodopsin family)
5557575352424176433ATPase family associated with various cellular activities (AAA)
5047475554423353381ABC transporter
4444444432ATP synthase alpha/beta family, nucleotide-binding domain
121116EGF-like domain
1514141414141414113Elongation factor Tu GTP binding domain
13101014101081287Helix-loop-helix DNA-binding domain
3333332323Hsp20/alpha crystallin family
7988987864Hsp70 protein
10879889867KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
111111118SH2 domain
2225232423262224189SH3 domain
101011101110101082Actin
113137811801365936119861Ankyrin repeat
5243455331PAN domain
7797887861ADP-ribosylation factor family
129911111091687Eukaryotic aspartyl protease
4444444432Cyclic nucleotide-binding domain
11Cytochrome b/b6/petB
111111118Cytochrome c
1221112212Double-stranded RNA binding motif
2018171820181417142EF hand
1111111184Fe-4S binding domain
3532632327Fibronectin type III domain
111112119Globin
181917221914716132Glutathione S-transferase, C-terminal domain
111111118Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
97787881064Homeodomain
3343433326lactate/malate dehydrogenase, NAD binding domain
11Low-density lipoprotein receptor repeat class B
5544554436Myosin head (motor domain)
135180158184185119521861,199Cytochrome P450
1961981271721711201042541,342Protein kinase domain
2324182122191121159Pyridine nucleotide-disulphide oxidoreductase
2424252626252328201Ras family
2419232322231920173Response regulator receiver domain
352132521RNase H
6062606263646165497RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
3433333224Copper/zinc superoxide dismutase (SODC)
2222222216Iron/manganese superoxide dismutases, alpha-hairpin domain
171614151710913111Subtilase family
7179928396783591625Sugar (and other) transporter
111013131211101191Thioredoxin
1363321120Trypsin
4444444432Tubulin/FtsZ family, GTPase domain
5636333534von Willebrand factor type A domain
7167626980585787551Zinc finger, C2H2 type
87826964686160102593Zinc finger, C3HC4 type (RING finger)
96495711960Zinc knuckle
4322222320Protein-tyrosine phosphatase
164138171187231149851851,310short chain dehydrogenase
73737393101604385601Zinc-binding dehydrogenase
6676666649Thiolase, N-terminal domain
273620354616922211Beta-ketoacyl synthase, N-terminal domain
65876647492Fe-2S iron-sulfur cluster binding domain
111126Papain family cysteine protease
111111129Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
810981088869Glutamine amidotransferase class-I
101110101010101081TCP-1/cpn60 chaperonin family
3433433326Glutamine synthetase, catalytic domain
2322222217Triosephosphate isomerase
1715141818131517127E1-E2 ATPase
71377888765Core histone H2A/H2B/H3/H4
11111218Copper binding proteins, plastocyanin/azurin family
810710131031071Alpha amylase, catalytic domain
222122213Phorbol esters/diacylglycerol binding domain (C1 domain)
8778876758Bacterial transferase hexapeptide (six repeats)
3434533328tRNA synthetases class I (I, L, M and V)
7878776757Cyclin, N-terminal domain
2734323440401231250Carboxylesterase family
4444444432DNA polymerase family B
4444444432ATP synthase subunit C
799137561066Peroxidase
101517202612524129Beta-lactamase
4342343326C-5 cytosine-specific DNA methylase
3231282630262529227Calcineurin-like phosphoesterase
121516131512615104Cellulase (glycosyl hydrolase family 5)
7977878760tRNA synthetases class II (D, K and N)
4141404241403843326Mitochondrial carrier protein
11recA bacterial DNA recombination protein
1923222022181419157Aminotransferase class I and II
81199998972Phosphoribosyl transferase domain
11109111010101081Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111118Phosphoglycerate kinase
2222222216Ribosomal protein S4/S9 N-terminal domain
2222222216Ribosomal protein S12/S23
111111118Bacterial regulatory helix-turn-helix proteins, AraC family
111111118Chaperonin 10 Kd subunit
121113141010111293C2 domain
1819192021181918152PH domain
89981196868bZIP transcription factor
2022232124191426169Aldehyde dehydrogenase family
204195235241290194962341,689Fungal Zn(2)-Cys(6) binuclear cluster domain
2326232425232124189Cytochrome b5-like Heme/Steroid binding domain
3443323325Oxidoreductase molybdopterin binding domain
1617181717171416132Oxidoreductase NAD-binding domain
2628283230252326218SNF2 family N-terminal domain
2222222216Ribosomal protein S7p/S5e
2422242324222226187Ubiquitin-conjugating enzyme
7788776656Isocitrate/isopropylmalate dehydrogenase
2222222216Ribosomal Proteins L2, RNA binding domain
111111118Hsp90 protein
2322222217Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111118Dihydrofolate reductase
1146711418768Chitin recognition protein
3344532327Cysteine-rich secretory protein family
111111118Ribosomal protein S3, C-terminal domain
5666443741Cupin
2222222216Annexin
1222211213Eukaryotic-type carbonic anhydrase
112Chalcone and stilbene synthases, N-terminal domain
33333333242-oxoacid dehydrogenases acyltransferase (catalytic domain)
5626424635Catalase
111111118Disintegrin
11215UDP-glucoronosyl and UDP-glucosyl transferase
107108895966Aminotransferase class-III
2222222216Ribosomal protein S19
111111118DNA gyrase B
6677985856Thiamine pyrophosphate enzyme, central domain
4444444432Lyase
2222222216Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
11211118Sodium:neurotransmitter symporter family
111111118Adenylate and Guanylate cyclase catalytic domain
111111118ATP synthase delta (OSCP) subunit
211111119Orotidine 5'-phosphate decarboxylase / HUMPS family
111111118Indole-3-glycerol phosphate synthase
132321214Aromatic amino acid lyase
111111118Pyruvate kinase, barrel domain
101011121111101085Kinesin motor domain
3640363831323743293DnaJ domain
1414141414141414112Proteasome subunit
67886741056Major intrinsic protein
111111118ATP synthase
2563332327Glycosyl hydrolase family 1
1111111183'5'-cyclic nucleotide phosphodiesterase
111111118Profilin
111111118Ribosomal protein L22p/L17e
2222222216Ribosomal protein L14p/L23e
13121412101091292Ubiquitin family
4555555438Cofilin/tropomyosin-type actin-binding protein
222222221614-3-3 protein
5364654538Alkaline phosphatase
6667676347Zinc carboxypeptidase
2839413639281843272Aldo/keto reductase family
1414141813121518118Myb-like DNA-binding domain
4444444432Forkhead domain
334422220Glycosyl hydrolases family 32 N-terminal domain
111111118Ribosomal protein L16p/L10e
2233233422Ribosomal protein S14p/S29e
4554454435FKBP-type peptidyl-prolyl cis-trans isomerase
111111118Glutathione peroxidase
211111119
77781085860Flavodoxin
112Protamine P1
111111118Calreticulin family
2017181315142113131Common central domain of tyrosinase
610881077864Aminotransferase class-V
111111118Ribonucleotide reductase, small chain
3641394040423840316DEAD/DEAH box helicase
6981778077826976611Helicase conserved C-terminal domain
111111118EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2221222215Ribosomal protein L23
111111118Pyridoxal-dependent decarboxylase, C-terminal sheet domain
2222222216Ribosomal protein L5
6676876753Pyridoxal-dependent decarboxylase conserved domain
2233222319Citrate synthase, C-terminal domain
5655655643GHMP kinases N terminal domain
7776766753Biotin carboxylase, N-terminal domain
111111118Tryptophan synthase alpha chain
1010111210891181Pyridoxal-phosphate dependent enzyme
1619161614171319130NUDIX domain
5766556949pfkB family carbohydrate kinase
1010127710965Glycosyl hydrolases family 28
12115Luciferase-like monooxygenase
2222222216Ribosomal protein L3
2122222316Ribosomal protein L11, RNA binding domain
1615121515141317117Histidine phosphatase superfamily (branch 1)
111111118Thymidylate synthase
1113Lipoxygenase
4444444432ATP synthase alpha/beta chain, C terminal domain
5555544538Calponin homology (CH) domain
4556454437Glutamine amidotransferases class-II
2222222216Ribosomal protein S15
11'Cold-shock' DNA-binding domain
111111118Thaumatin family
2222221215Fructose-1-6-bisphosphatase, N-terminal domain
111111118Ribonucleotide reductase, all-alpha domain
2222222216Ribosomal protein S2
1222122214SRF-type transcription factor (DNA-binding and dimerisation domain)
6776766752GATA zinc finger
5347474856483658393Amino acid permease
5556665543Prolyl oligopeptidase family
2323333221Ribosomal protein L30p/L7e
11111213131161289Histidine phosphatase superfamily (branch 2)
111111118Respiratory-chain NADH dehydrogenase, 30 Kd subunit
5654454437Aconitase family (aconitate hydratase)
5755434538Glycosyl hydrolase family 10
3223333322Glycosyl hydrolases family 17
2222222216Ribosomal protein S5, N-terminal domain
111111118Nucleoside diphosphate kinase
11Galactoside-binding lectin
111111118Ribosomal protein S10p/S20e
5666774546Arrestin (or S-antigen), N-terminal domain
111111118Phosphoglucose isomerase
111111118Carbohydrate phosphorylase
111111118SecY translocase
111111118Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222216Ribosomal protein L6
3533343428Polyprenyl synthetase
5565455540Hexokinase
1010861076663Dynamin family
11Biopterin-dependent aromatic amino acid hydroxylase
111111118Transcription factor TFIID (or TATA-binding protein, TBP)
5666554643Rieske [2Fe-2S] domain
2114Phytochrome region
8898988967Biotin-requiring enzyme
111111118Phosphofructokinase
1222222215Ribosomal protein S17
121111119Hydroxymethylglutaryl-coenzyme A reductase
3333333324FGGY family of carbohydrate kinases, N-terminal domain
1113Sodium:dicarboxylate symporter family
119141415141214103Enoyl-CoA hydratase/isomerase
2222222216Ribosomal protein S9/S16
2222222216Transcription factor TFIIB repeat
7789775858Cytidine and deoxycytidylate deaminase zinc-binding region
111111118Molybdopterin oxidoreductase
61047466851Chromo (CHRromatin Organisation MOdifier) domain
3333333324Phosphatidylinositol-specific phospholipase C, Y domain
3433344327Phosphatidylinositol-specific phospholipase C, X domain
99711121181279D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2222222216Malic enzyme, N-terminal domain
12221122136-phosphogluconate dehydrogenase, C-terminal domain
131112152014417106Multicopper oxidase
13121210109111087WW domain
111111118Ribosomal RNA adenine dimethylase
1222212214Yeast PIR protein repeat
110147105160117103103111956WD domain, G-beta repeat
5555554539Heavy-metal-associated domain
5545434636Adenylate kinase
2433332222Phosphoglucomutase/phosphomannomutase, C-terminal domain
2212222215Ribosomal protein S8
2122211112Ribosomal protein S11
4544544434LIM domain
2213211315Matrixin
2211112212Regulator of chromosome condensation (RCC1) repeat
2212222215Ribosomal protein S13/S18
2333222219chorismate binding enzyme
444444343160s Acidic ribosomal protein
4545544536Prenyltransferase and squalene oxidase repeat
5665666747Protein kinase C terminal domain
111111118Single-strand binding protein family
111111118S-adenosylmethionine synthetase, N-terminal domain
8868888761Bromodomain
1611101518161416116Acyl-CoA dehydrogenase, C-terminal domain
1514171416151514120Ubiquitin carboxyl-terminal hydrolase
111111118Ribosomal protein L36
2222221215Ribonuclease T2 family
11Gonadotropin-releasing hormone
2343333324HSF-type DNA-binding
2222222216SRP54-type protein, GTPase domain
111111118Urease alpha-subunit, N-terminal domain
14101211131141388Serine carboxypeptidase
112Apoptosis regulator proteins, Bcl-2 family
8888888864Phosphatidylinositol 3- and 4-kinase
2243231421Transketolase, thiamine diphosphate binding domain
4454554536Glycosyl hydrolases family 11
5555553538Inositol monophosphatase family
4444444432Glutaredoxin
3354553432Isocitrate lyase family
2223222318Serine hydroxymethyltransferase
4334443429Iron-containing alcohol dehydrogenase
2222222216Ribosomal protein L10
5423333427KOW motif
111111118Ribosomal protein L34
2222212215RF-1 domain
3162762330Sodium:solute symporter family
112111119Imidazoleglycerol-phosphate dehydratase
111111118DNA polymerase family A
111111118IMP dehydrogenase / GMP reductase domain
111111118Glucose-6-phosphate dehydrogenase, NAD binding domain
6766665648Protein phosphatase 2C
3233333424Nucleotidyl transferase
3434423427Carbonic anhydrase
111111118Phosphoribulokinase / Uridine kinase family
57791184758Fatty acid desaturase
6666666648MutS domain V
111111118Delta-aminolevulinic acid dehydratase
4665553438Arginase family
6666666648MCM P-loop domain
2222322217Squalene/phytoene synthase
112Bacterial extracellular solute-binding proteins, family 5 Middle
11Bacterial extracellular solute-binding proteins, family 3
108869991170FHA domain
4752495759473853402AMP-binding enzyme
4446544536G-protein alpha subunit
7889778862HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
2116212019201616149His Kinase A (phospho-acceptor) domain
3333353326Armadillo/beta-catenin-like repeat
2331213932262335230Tetratricopeptide repeat
4334542530Ion transport protein
111111118DNA gyrase/topoisomerase IV, subunit A
1313121412121113100BRCA1 C Terminus (BRCT) domain
8978776759Glycosyl transferases group 1
4553723332Glycosyl transferase family 2
2343323424SAM domain (Sterile alpha motif)
111111118linker histone H1 and H5 family
111111118Ribosomal protein L7/L12 C-terminal domain
5686562341Pectate lyase
141211111ribonuclease
111111118Urease, gamma subunit
4444444432CoA-ligase
1824193130151123171Phosphopantetheine attachment site
3333333324Formyl transferase
91198998972Metallopeptidase family M24
1215121515151514113Leucine Rich Repeat
3951604653383151369alpha/beta hydrolase fold
3333333425RNA polymerase Rpb2, domain 6
4434434329PB1 domain
2222222216Staphylococcal nuclease homologue
121211121111121192Rab-GTPase-TBC domain
111211119Tudor domain
111111118WH1 domain
4453543331Zinc finger, ZZ type
3234333324HRDC domain
10109109910976CBS domain
2222222216Ribosomal protein L13
2222222216Ribosomal protein L4/L1 family
111111118Clp protease
2442443225S1 RNA binding domain
111111118HIUase/Transthyretin family
7557534743AhpC/TSA family
4544544535tRNA synthetases class I (W and Y)
111121119UvrD/REP helicase N-terminal domain
6547556644Rhodanese-like domain
2222212215Universal stress protein family
5145545155382854376Acetyltransferase (GNAT) family
111111118SecE/Sec61-gamma subunits of protein translocation complex
111111118C-terminal regulatory domain of Threonine dehydratase
2222222216AIR synthase related protein, N-terminal domain
8888888864tRNA synthetase class II core domain (G, H, P, S and T)
2222222216SpoU rRNA Methylase family
2222222216Tetrapyrrole (Corrin/Porphyrin) Methylases
1122111211Glycosyl transferase family, a/b domain
111111118PDZ domain
7867976858Class II Aldolase and Adducin N-terminal domain
4434334429Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
5555445538Fes/CIP4, and EFC/F-BAR homology domain
4443456434IQ calmodulin-binding motif
2222222216Phosphoinositide 3-kinase family, accessory domain (PIK domain)
5655665543Phospholipase D Active site motif
11111117Regulator of G protein signaling domain
3333333324GTPase-activator protein for Ras-like GTPase
4444444432RasGEF domain
4444444432RasGEF N-terminal motif
9888888865RhoGAP domain
6666566748RhoGEF domain
5332223323SPRY domain
3333333324RNA polymerase Rpb1, domain 2
1211211211Guanylate kinase
4444444432Gelsolin repeat
88109119111076UBA/TS-N domain
1720181820171619145PHD-finger
111111118GGL domain
5555554539HECT-domain (ubiquitin-transferase)
1222223115Helix-hairpin-helix motif
111111118MSP (Major sperm protein) domain
6876476751Ribonuclease III domain
2122232216Region in Clathrin and VPS
2222222216RanBP1 domain
2222222216PPIC-type PPIASE domain
112111119Zn-finger in Ran binding protein and others
2018281622221423163Zinc finger C-x8-C-x5-C-x3-H type (and similar)
3223332321Poly(ADP-ribose) polymerase catalytic domain
1222212214Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
9310810183967868131758F-box domain
111111118Elongation factor 1 gamma, conserved domain
3334333325Calpain family cysteine protease
2222322116Copper fist DNA binding domain
6555555541CRAL/TRIO domain
1719262621171339178BTB/POZ domain
2311321316Ricin-type beta-trefoil lectin domain
111111118Inhibitor of Apoptosis domain
4434443430Voltage gated chloride channel
4325321424Caspase domain
1318201417151317127GDSL-like Lipase/Acylhydrolase
111111118Poly-adenylate binding protein, unique domain
211211210POLO box duplicated region
2420232328191423174ABC transporter transmembrane region
98781185864FAD binding domain
10111191073970Condensation domain
111111118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
111111118HAMP domain
2222222216ribosomal L5P family C-terminus
5555667544Insulinase (Peptidase family M16)
3333333324Dehydrogenase E1 component
111111118Lumazine binding domain
6676666649Elongation factor G C-terminus
4454444433HMGL-like
4544554435DnaJ central domain
1243552426Starch binding domain
2333332322Ribosomal protein L1p/L10e family
97610958963Cation transporting ATPase, C-terminus
987111076765Cation transporter/ATPase, N-terminus
112111119dUTPase
5554454436Aconitase C-terminal domain
4333443327Amino acid kinase family
111111118N-(5'phosphoribosyl)anthranilate (PRA) isomerase
243218334114920191Acyl transferase domain
111111118Urease beta subunit
7687865754Dihydrodipicolinate synthetase family
3435323937332938277haloacid dehalogenase-like hydrolase
5966772850Glycosyl hydrolases family 2
1813131311141313108Glycosyl hydrolases family 18
111111118Proliferating cell nuclear antigen, N-terminal domain
111111118Acylphosphatase
111111118Adenylosuccinate synthetase
3222331319Asparaginase, N-terminal
3222112215Peptidase S24-like
111111118Inorganic pyrophosphatase
711111091081177Glycosyl hydrolases family 16
3343441426Glycosyl hydrolases family 15
8795974756NADH:flavin oxidoreductase / NADH oxidase family
22312232173-hydroxyacyl-CoA dehydrogenase, C-terminal domain
3443432427Glycosyl hydrolase family 20, catalytic domain
4565546439HhH-GPD superfamily base excision DNA repair protein
111111118AIR carboxylase
3136293231211233225GMC oxidoreductase
2333222219Asparagine synthase
1012131091291489Fungal cellulose binding domain
6566666546Septin
111111118EF-1 guanine nucleotide exchange domain
111111118Homoserine dehydrogenase
1542322221Flavin-binding monooxygenase-like
11LPXTG cell wall anchor motif
3333333324tRNA synthetases class I (E and Q), catalytic domain
3323231421tRNA synthetases class I (R)
5444534433XPG N-terminal domain
1012131415961695Metallo-beta-lactamase superfamily
212132112F5/8 type C domain
3232323220Choline/Carnitine o-acyltransferase
111111118Putative esterase
1111111