PFAM Domains • Crucibulum laeve CBS 166.37 v1.0
Annotations/GenomesCorgl3Crula1Galma1Hypsu1Lacam2Trima3TotalAnnotation Description
PFAMs
8,17910,4589,4978,5127,7937,49951,938
434548503944269ATPase family associated with various cellular activities (AAA)
515968504346317ABC transporter
44445526ATP synthase alpha/beta family, nucleotide-binding domain
22EGF-like domain
162015171715100Elongation factor Tu GTP binding domain
11121111141271Helix-loop-helix DNA-binding domain
109878547Hsp20/alpha crystallin family
98131113963Hsp70 protein
129889753KH domain
111115SH2 domain
321629293227165SH3 domain
13111111161274Actin
46374372760247Ankyrin repeat
88989850ADP-ribosylation factor family
232328242515138Eukaryotic aspartyl protease
33333318Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
1221118Cytochrome c
8106514851Double-stranded RNA binding motif
1711718191587EF hand
1111154Fe-4S binding domain
111115Fibronectin type III domain
1514141191881Glutathione S-transferase, C-terminal domain
122112119Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
213Hemopexin
88810111560Homeodomain
11Laminin EGF domain
22222212lactate/malate dehydrogenase, NAD binding domain
54576532Myosin head (motor domain)
17116717415487103856Cytochrome P450
1651791921521931501,031Protein kinase domain
15152019121192Pyridine nucleotide-disulphide oxidoreductase
252835303728183Ras family
88897848Response regulator receiver domain
198109551RNase H
696269628371416RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
1313Reverse transcriptase (RNA-dependent DNA polymerase)
1111116Copper/zinc superoxide dismutase (SODC)
22323214Iron/manganese superoxide dismutases, alpha-hairpin domain
6141685352Subtilase family
264339332326190Sugar (and other) transporter
1112131011966Thioredoxin
55565531Tubulin/FtsZ family, GTPase domain
61774631von Willebrand factor type A domain
711760756649338Zinc finger, C2H2 type
59974666755330Zinc finger, C3HC4 type (RING finger)
329391611107Zinc knuckle
34322216Protein-tyrosine phosphatase
5997801155154456short chain dehydrogenase
293635372630193Zinc-binding dehydrogenase
55444426Thiolase, N-terminal domain
97855236Beta-ketoacyl synthase, N-terminal domain
313443182Fe-2S iron-sulfur cluster binding domain
1212118Enolase, C-terminal TIM barrel domain
112Cytochrome C and Quinol oxidase polypeptide I
108878849Glutamine amidotransferase class-I
1010101312964TCP-1/cpn60 chaperonin family
112ATP synthase A chain
43343320Glutamine synthetase, catalytic domain
1121117Triosephosphate isomerase
16181414131792E1-E2 ATPase
151415232523115Core histone H2A/H2B/H3/H4
1326Copper binding proteins, plastocyanin/azurin family
58857639Alpha amylase, catalytic domain
54656632Phorbol esters/diacylglycerol binding domain (C1 domain)
55334626Bacterial transferase hexapeptide (six repeats)
34533321tRNA synthetases class I (I, L, M and V)
10131513141176Cyclin, N-terminal domain
15283440147138Carboxylesterase family
4445421DNA polymerase family B
43333319ATP synthase subunit C
161734223294Peroxidase
461284135Beta-lactamase
44444323C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
272530293330174Calcineurin-like phosphoesterase
102322149886Cellulase (glycosyl hydrolase family 5)
55785535tRNA synthetases class II (D, K and N)
403841363737229Mitochondrial carrier protein
12161613151385Aminotransferase class I and II
74877740Phosphoribosyl transferase domain
12121214121274Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111116Phosphoglycerate kinase
22222212Ribosomal protein S4/S9 N-terminal domain
22222212Ribosomal protein S12/S23
1111116Chaperonin 10 Kd subunit
241427221417118C2 domain
20824182220112PH domain
89566640bZIP transcription factor
211818171520109Aldehyde dehydrogenase family
615763667973399Fungal Zn(2)-Cys(6) binuclear cluster domain
222127232224139Cytochrome b5-like Heme/Steroid binding domain
23323114Oxidoreductase molybdopterin binding domain
86988645Oxidoreductase NAD-binding domain
232329312423153SNF2 family N-terminal domain
22322213Ribosomal protein S7p/S5e
242223232221135Ubiquitin-conjugating enzyme
86666638Isocitrate/isopropylmalate dehydrogenase
22222212Ribosomal Proteins L2, RNA binding domain
22332214Hsp90 protein
22323214Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111116Dihydrofolate reductase
1113Chitin recognition protein
164210124Cysteine-rich secretory protein family
1111116Ribosomal protein S3, C-terminal domain
52142115Cupin
1112117Annexin
22Eukaryotic-type carbonic anhydrase
333433192-oxoacid dehydrogenases acyltransferase (catalytic domain)
43531218Catalase
1111116Disintegrin
27103426UDP-glucoronosyl and UDP-glucosyl transferase
551056536Aminotransferase class-III
22322213Ribosomal protein S19
1111116DNA gyrase B
43442320Thiamine pyrophosphate enzyme, central domain
44454324Lyase
12223212Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
13122110Adenylate and Guanylate cyclase catalytic domain
1111116ATP synthase delta (OSCP) subunit
1111116Orotidine 5'-phosphate decarboxylase / HUMPS family
1211229Indole-3-glycerol phosphate synthase
32522216Aromatic amino acid lyase
1211117Pyruvate kinase, barrel domain
91089101056Kinesin motor domain
383338313230202DnaJ domain
14141414141585Proteasome subunit
76746737Major intrinsic protein
1111116ATP synthase
2453216Glycosyl hydrolase family 1
11111163'5'-cyclic nucleotide phosphodiesterase
1111116Profilin
12111410Ribosomal protein L22p/L17e
23222213Ribosomal protein L14p/L23e
181520182822121Ubiquitin family
55655531Cofilin/tropomyosin-type actin-binding protein
121113914-3-3 protein
21322212Alkaline phosphatase
1111116Zinc carboxypeptidase
365147372633230Aldo/keto reductase family
1371315141577Myb-like DNA-binding domain
45685533Forkhead domain
11Glycosyl hydrolases family 32 N-terminal domain
1211117Ribosomal protein L16p/L10e
22222212Ribosomal protein S14p/S29e
33475527FKBP-type peptidyl-prolyl cis-trans isomerase
1121218Glutathione peroxidase
222219
73684432Flavodoxin
1111116Calreticulin family
86411231Common central domain of tyrosinase
79776945Aminotransferase class-V
22437220Ribonucleotide reductase, small chain
705349566662356DEAD/DEAH box helicase
106808810393103573Helicase conserved C-terminal domain
111115Fructose-bisphosphate aldolase class-I
1111116EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
22223213Ribosomal protein L23
1111116Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111116Ribosomal protein L5
85455330Pyridoxal-dependent decarboxylase conserved domain
37433323Citrate synthase, C-terminal domain
55555530GHMP kinases N terminal domain
67775638Biotin carboxylase, N-terminal domain
1111116Tryptophan synthase alpha chain
77777742Pyridoxal-phosphate dependent enzyme
16161817141596NUDIX domain
55444426pfkB family carbohydrate kinase
351773237Glycosyl hydrolases family 28
22222212Ribosomal protein L3
22222212Ribosomal protein L11, RNA binding domain
1191187854Histidine phosphatase superfamily (branch 1)
1111116Thymidylate synthase
426Lipoxygenase
44444525ATP synthase alpha/beta chain, C terminal domain
64444426Calponin homology (CH) domain
62755833Glutamine amidotransferases class-II
22222212Ribosomal protein S15
16242116Thaumatin family
1211117Fructose-1-6-bisphosphatase, N-terminal domain
2131119Ribonucleotide reductase, all-alpha domain
22222212Ribosomal protein S2
53634526SRF-type transcription factor (DNA-binding and dimerisation domain)
13111211121069GATA zinc finger
211031302419135Amino acid permease
610985644Prolyl oligopeptidase family
1211117Ribosomal protein L30p/L7e
699109649Histidine phosphatase superfamily (branch 2)
1111116Respiratory-chain NADH dehydrogenase, 30 Kd subunit
44455426Aconitase family (aconitate hydratase)
2109728Glycosyl hydrolase family 10
34422318Glycosyl hydrolases family 17
22222212Ribosomal protein S5, N-terminal domain
12222211Nucleoside diphosphate kinase
16423319Tetraspanin family
1517Galactoside-binding lectin
23222112Ribosomal protein S10p/S20e
33964227Arrestin (or S-antigen), N-terminal domain
1122118Phosphoglucose isomerase
1111127Carbohydrate phosphorylase
1111116SecY translocase
1111217Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22222212Ribosomal protein L6
79946540Polyprenyl synthetase
22432215Hexokinase
710798748Dynamin family
2111117Transcription factor TFIID (or TATA-binding protein, TBP)
53544425Rieske [2Fe-2S] domain
11Phytochrome region
314Proton-conducting membrane transporter
99101081056Biotin-requiring enzyme
1111116Phosphofructokinase
22222212Ribosomal protein S17
1111217Hydroxymethylglutaryl-coenzyme A reductase
33333318FGGY family of carbohydrate kinases, N-terminal domain
881098952Enoyl-CoA hydratase/isomerase
22222212Ribosomal protein S9/S16
23342216Transcription factor TFIIB repeat
66687639Cytidine and deoxycytidylate deaminase zinc-binding region
1111116Molybdopterin oxidoreductase
1591215869128Chromo (CHRromatin Organisation MOdifier) domain
73345224Phosphatidylinositol-specific phospholipase C, Y domain
74345225Phosphatidylinositol-specific phospholipase C, X domain
66664735D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
33335219Malic enzyme, N-terminal domain
11111166-phosphogluconate dehydrogenase, C-terminal domain
81691391772Multicopper oxidase
9109118956WW domain
22322213Ribosomal RNA adenine dimethylase
181140166141231138997WD domain, G-beta repeat
45444526Heavy-metal-associated domain
33333318Adenylate kinase
22112210Phosphoglucomutase/phosphomannomutase, C-terminal domain
1311118Ribosomal protein S8
22222212Ribosomal protein S11
66776638LIM domain
66Matrixin
33223316Regulator of chromosome condensation (RCC1) repeat
22222212Ribosomal protein S13/S18
22222212chorismate binding enzyme
4352432160s Acidic ribosomal protein
44444424Prenyltransferase and squalene oxidase repeat
65776738Protein kinase C terminal domain
1111116Single-strand binding protein family
1112117S-adenosylmethionine synthetase, N-terminal domain
10101010111061Bromodomain
8991081155Acyl-CoA dehydrogenase, C-terminal domain
14161915201498Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
4222313Ribonuclease T2 family
941645442HSF-type DNA-binding
22222212SRP54-type protein, GTPase domain
1111127Urease alpha-subunit, N-terminal domain
918141771075Serine carboxypeptidase
88988849Phosphatidylinositol 3- and 4-kinase
22222212Transketolase, thiamine diphosphate binding domain
18211Glycosyl hydrolases family 11
111115WHEP-TRS domain
22224214Inositol monophosphatase family
54445729Glutaredoxin
525122430Isocitrate lyase family
1411119Serine hydroxymethyltransferase
22222212Iron-containing alcohol dehydrogenase
22222111Ribosomal protein L10
548510537KOW motif
1111116Ribosomal protein L34
11Ribosomal protein L33
33221213RF-1 domain
23342317Sodium:solute symporter family
1111116Imidazoleglycerol-phosphate dehydratase
111115DNA polymerase family A
1111116IMP dehydrogenase / GMP reductase domain
2111117Glucose-6-phosphate dehydrogenase, NAD binding domain
131414912971Protein phosphatase 2C
13233315Nucleotidyl transferase
36664328Carbonic anhydrase
1111116Phosphoribulokinase / Uridine kinase family
1010141191266Fatty acid desaturase
66666838MutS domain V
1111116Delta-aminolevulinic acid dehydratase
36442423Arginase family
96766842MCM P-loop domain
1211128Squalene/phytoene synthase
910131311965FHA domain
315534322030202AMP-binding enzyme
142324211815115G-protein alpha subunit
171720231916112HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
112Cytochrome c oxidase subunit III
75554531His Kinase A (phospho-acceptor) domain
43422419Armadillo/beta-catenin-like repeat
301338365132200Tetratricopeptide repeat
33432318Ion transport protein
1111116DNA gyrase/topoisomerase IV, subunit A
11VPR/VPX protein
1041010111257BRCA1 C Terminus (BRCT) domain
84786740Glycosyl transferases group 1
33743323Glycosyl transferase family 2
31331213SAM domain (Sterile alpha motif)
44444424linker histone H1 and H5 family
1111116Ribosomal protein L7/L12 C-terminal domain
4228Pectate lyase
123ribonuclease
1111127Urease, gamma subunit
33333318CoA-ligase
8151056650Phosphopantetheine attachment site
22223213Formyl transferase
91191010857Metallopeptidase family M24
1421614171376Leucine Rich Repeat
441444472530204alpha/beta hydrolase fold
33333318RNA polymerase Rpb2, domain 6
65555531PB1 domain
22222212Staphylococcal nuclease homologue
1112111110964Rab-GTPase-TBC domain
1111116Tudor domain
22221211WH1 domain
33574527Zinc finger, ZZ type
111115HRDC domain
10610119955CBS domain
22222212Ribosomal protein L13
22222212Ribosomal protein L4/L1 family
1111116Clp protease
54353323S1 RNA binding domain
1111116HIUase/Transthyretin family
54574429AhpC/TSA family
44547529tRNA synthetases class I (W and Y)
1311118UvrD/REP helicase N-terminal domain
48554329Rhodanese-like domain
22234215Universal stress protein family
292740462025187Acetyltransferase (GNAT) family
1111116SecE/Sec61-gamma subunits of protein translocation complex
1111116C-terminal regulatory domain of Threonine dehydratase
32222213AIR synthase related protein, N-terminal domain
95666739tRNA synthetase class II core domain (G, H, P, S and T)
11Phage integrase family
21222312Tetrapyrrole (Corrin/Porphyrin) Methylases
1111116Glycosyl transferase family, a/b domain
12331313Class II Aldolase and Adducin N-terminal domain
45444627Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
66667637Fes/CIP4, and EFC/F-BAR homology domain
421134226IQ calmodulin-binding motif
22222212Phosphoinositide 3-kinase family, accessory domain (PIK domain)
52434422Phospholipase D Active site motif
1312119Regulator of G protein signaling domain
74444427GTPase-activator protein for Ras-like GTPase
781078646RasGEF domain
771079747RasGEF N-terminal motif
14121413131278RhoGAP domain
14141713161488RhoGEF domain
44444424SPRY domain
33345321RNA polymerase Rpb1, domain 2
1121117Guanylate kinase
44434322Gelsolin repeat
13610981056UBA/TS-N domain
251721181927127PHD-finger
221117GGL domain
7518651152HECT-domain (ubiquitin-transferase)
1111217Helix-hairpin-helix motif
11262113MSP (Major sperm protein) domain
114689644Ribonuclease III domain
24622218Region in Clathrin and VPS
34534423RanBP1 domain
22222313PPIC-type PPIASE domain
41342418Zn-finger in Ran binding protein and others
231027212925135Zinc finger C-x8-C-x5-C-x3-H type (and similar)
1111116B-box zinc finger
105695439Poly(ADP-ribose) polymerase catalytic domain
22222212Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
1303229412115060787F-box domain
2111128Elongation factor 1 gamma, conserved domain
214666346Calpain family cysteine protease
22222212Copper fist DNA binding domain
79776743CRAL/TRIO domain
19265019155134BTB/POZ domain
101116108661Ricin-type beta-trefoil lectin domain
2111117Inhibitor of Apoptosis domain
33333318Voltage gated chloride channel
25144239173140Caspase domain
591892548GDSL-like Lipase/Acylhydrolase
2121219Poly-adenylate binding protein, unique domain
1111217POLO box duplicated region
263138241618153ABC transporter transmembrane region
12618Integrase core domain
33333318FAD binding domain
42324217Condensation domain
1221118S-adenosyl-L-homocysteine hydrolase, NAD binding domain
161121122HAMP domain
22232213ribosomal L5P family C-terminus
55555530Insulinase (Peptidase family M16)
45454527Dehydrogenase E1 component
1111116Lumazine binding domain
897811750Elongation factor G C-terminus
46444527HMGL-like
44444424DnaJ central domain
47351121Starch binding domain
43222215Ribosomal protein L1p/L10e family
78865842Cation transporting ATPase, C-terminus
108988952Cation transporter/ATPase, N-terminus
1111217dUTPase
44645427Aconitase C-terminal domain
45338326Amino acid kinase family
1211229N-(5'phosphoribosyl)anthranilate (PRA) isomerase
87754233Acyl transferase domain
1111127Urease beta subunit
22221211Dihydrodipicolinate synthetase family
311332322631165haloacid dehalogenase-like hydrolase
14221111Glycosyl hydrolases family 2
9121611101169Glycosyl hydrolases family 18
1111116Proliferating cell nuclear antigen, N-terminal domain
11Translation initiation factor IF-3, C-terminal domain
1111217Adenylosuccinate synthetase
1111116Asparaginase, N-terminal
33423217Peptidase S24-like
1111116Inorganic pyrophosphatase
516565441Glycosyl hydrolases family 16
46352222Glycosyl hydrolases family 15
62511108767NADH:flavin oxidoreductase / NADH oxidase family
11111163-hydroxyacyl-CoA dehydrogenase, C-terminal domain
14221212Glycosyl hydrolase family 20, catalytic domain
55555530HhH-GPD superfamily base excision DNA repair protein
3112119AIR carboxylase
326640321717204GMC oxidoreductase
32422518Asparagine synthase
249522811133Fungal cellulose binding domain
87777743Septin
1111116EF-1 guanine nucleotide exchange domain
2111117Homoserine dehydrogenase
13322314Flavin-binding monooxygenase-like
11LPXTG cell wall anchor motif
33333419tRNA synthetases class I (E and Q), catalytic domain
1221118tRNA synthetases class I (R)
66910111052XPG N-terminal domain
99111110858Metallo-beta-lactamase superfamily
1113F5/8 type C domain
66474633Choline/Carnitine o-acyltransferase
1111116Putative esterase
1111116Glycosyl hydrolase family 9
1111116Ferrochelatase
22222212Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
1111116Arginosuccinate synthase
1111116Electron transfer flavoprotein FAD-binding domain
33343319RNB domain
24552220Dioxygenase
56545530CNH domain
22222212Diacylglycerol kinase catalytic domain
11141511131882Dual specificity phosphatase, catalytic domain
1111116MyTH4 domain
66536531P21-Rho-binding domain
15151515121587PX domain
42534422Ras association (RalGDS/AF-6) domain
44454425UBX domain
65556532VHS domain
1111116Phosphoinositide 3-kinase C2
22222212DAHP synthetase I family
33333318Carbon-nitrogen hydrolase
213N-acetyltransferase
11Geminivirus Rep catalytic domain
1111116Prephenate dehydratase
44645528Syntaxin
55565531Pumilio-family RNA binding repeat
66667637Histone-like transcription factor (CBF/NF-Y) and archaeal histone
1111116Pterin binding enzyme
1111116ER lumen protein retaining receptor
22222212Glycoprotease family
1111116Histidinol dehydrogenase
33433319impB/mucB/samB family
111126
1111116Ribosomal L15
1311118Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
1111116Ribosomal prokaryotic L21 protein
1111116Ribosomal L28 family
1111116Ribosomal L29 protein
1111116Ribosomal L39 protein
1111116Ribosomal S17
1111116Ribulose-phosphate 3 epimerase family
1111116Translationally controlled tumour protein
1194327Glycosyl hydrolase family 7
22222212RNA pseudouridylate synthase
77786641Histone deacetylase domain
23532217POT family
22222212PWWP domain
202633262021146SET domain
68552430Isochorismatase family
23242518Permease family
1111116Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
951211152274XPG I-region
1113Acetokinase family
111115DNA photolyase
111115Cation-independent mannose-6-phosphate receptor repeat
2111218Cytosol aminopeptidase family, catalytic domain
112116Sulfatase
11111166,7-dimethyl-8-ribityllumazine synthase
1111116Ribosomal protein S16
33333318Acyl CoA binding protein
76567536Cullin family
1111116Elongation factor TS
33743323FAD binding domain
315896546O-methyltransferase domain
67555533EamA-like transporter family
2222412
107897748ThiF family
1111116Ribosomal family S4e
41532217Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
33537223Ammonium Transporter Family
34435322Sulfate permease family
1131118MATH domain
22222212Dehydratase family
24423217Transaldolase/Fructose-6-phosphate aldolase
33333116Mechanosensitive ion channel
1211117GTP cyclohydrolase II
11111163,4-dihydroxy-2-butanone 4-phosphate synthase
44549430Adaptor complexes medium subunit family
8887839Exonuclease
11114210Dipeptidyl peptidase IV (DPP IV) N-terminal region
13114NB-ARC domain
6101192644Glycosyl hydrolase family 3 N terminal domain
1111116Ribosomal protein L44
11Sodium:sulfate symporter transmembrane region
2111117DNA-dependent RNA polymerase
1111116Glycosyl transferase family 4
2111117HCO3- transporter family
23332215Nucleosome assembly protein (NAP)
54444526Synaptobrevin
1111116GMP synthase C terminal domain
32229Phage lysozyme
718LAGLIDADG endonuclease
33443320Adenosine/AMP deaminase
44544324Oxidoreductase FAD-binding domain
34221113Thioesterase domain
22222212Histidine biosynthesis protein
33338424Glycosyltransferase family 20
1111116UDP-glucose/GDP-mannose dehydrogenase family, central domain
22222212Carbamoyl-phosphate synthase small chain, CPSase domain
112PAS fold
11Diguanylate cyclase, GGDEF domain
22223213Probable molybdopterin binding domain
44444424Sec1 family
22222212GDP dissociation inhibitor
106698746Sodium/hydrogen exchanger family
22222313RNA polymerase Rpb3/RpoA insert domain
54544426Initiation factor 2 subunit family
1113PQQ enzyme repeat
22222212Electron transfer flavoprotein domain
1112117Uricase
1111116Ribosomal S3Ae family
1111116Ribosomal L27 protein
1111116GTP1/OBG
22222818Gamma-glutamyltranspeptidase
11Ribosomal L40e family
1111116GrpE
33521216TatD related DNase
1211117Inhibitor of apoptosis-promoting Bax1
2111117Eukaryotic DNA topoisomerase I, catalytic core
29224423Dynamin central region
223222136-O-methylguanine DNA methyltransferase, DNA binding domain
23342216Carboxyl transferase domain
39793940UbiA prenyltransferase family
47563328Endoribonuclease L-PSP
131117Phosphorylase superfamily