PFAM Domains • Phanerochaete chrysosporium v2.0
Please note that this organism is for archival use only. Please see the current Phanerochaete chrysosporium RP-78 v2.2 site for the latest data and information.
Annotations/GenomesPhchr1Pospl1TotalAnnotation Description
PFAMs
5,9273,2609,187
381351ATPase family associated with various cellular activities (AAA)
501767ABC transporter
44ATP synthase alpha/beta family, nucleotide-binding domain
11EGF-like domain
15621Elongation factor Tu GTP binding domain
11819Helix-loop-helix DNA-binding domain
66Hsp20/alpha crystallin family
77Hsp70 protein
8311KH domain
11SH2 domain
221436SH3 domain
11TNFR/NGFR cysteine-rich region
66Actin
222244Ankyrin repeat
617ADP-ribosylation factor family
531770Eukaryotic aspartyl protease
314Cyclic nucleotide-binding domain
123Cytochrome c
314Double-stranded RNA binding motif
24933EF hand
224Fe-4S binding domain
11Fibronectin type III domain
11Globin
14923Glutathione S-transferase, C-terminal domain
11Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
7613Homeodomain
11Laminin EGF domain
22lactate/malate dehydrogenase, NAD binding domain
55Myosin head (motor domain)
11365178Cytochrome P450
12079199Protein kinase domain
16521Pyridine nucleotide-disulphide oxidoreductase
28533Ras family
91524Response regulator receiver domain
44RNase H
592281RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Copper/zinc superoxide dismutase (SODC)
314Iron/manganese superoxide dismutases, alpha-hairpin domain
44Subtilase family
47956Sugar (and other) transporter
10111Thioredoxin
527Tubulin/FtsZ family, GTPase domain
44von Willebrand factor type A domain
52176228Zinc finger, C2H2 type
261541Zinc finger, C3HC4 type (RING finger)
71146217Zinc knuckle
224Protein-tyrosine phosphatase
7555130short chain dehydrogenase
573188Zinc-binding dehydrogenase
639Thiolase, N-terminal domain
224Beta-ketoacyl synthase, N-terminal domain
332Fe-2S iron-sulfur cluster binding domain
22Enolase, C-terminal TIM barrel domain
77Glutamine amidotransferase class-I
9110TCP-1/cpn60 chaperonin family
426Glutamine synthetase, catalytic domain
11Triosephosphate isomerase
11718E1-E2 ATPase
16319Core histone H2A/H2B/H3/H4
8311Alpha amylase, catalytic domain
538Phorbol esters/diacylglycerol binding domain (C1 domain)
44Bacterial transferase hexapeptide (six repeats)
617tRNA synthetases class I (I, L, M and V)
14519Cyclin, N-terminal domain
92029Carboxylesterase family
44DNA polymerase family B
336ATP synthase subunit C
17118Peroxidase
369Beta-lactamase
538C-5 cytosine-specific DNA methylase
191433Calcineurin-like phosphoesterase
81220Cellulase (glycosyl hydrolase family 5)
617tRNA synthetases class II (D, K and N)
34842Mitochondrial carrier protein
13518Aminotransferase class I and II
55Phosphoribosyl transferase domain
14721Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
112Phosphoglycerate kinase
224Ribosomal protein S4/S9 N-terminal domain
224Ribosomal protein S12/S23
11Chaperonin 10 Kd subunit
161026C2 domain
18422PH domain
8513bZIP transcription factor
19322Aldehyde dehydrogenase family
352863Fungal Zn(2)-Cys(6) binuclear cluster domain
231134Cytochrome b5-like Heme/Steroid binding domain
415Oxidoreductase molybdopterin binding domain
13215Oxidoreductase NAD-binding domain
121022SNF2 family N-terminal domain
224Ribosomal protein S7p/S5e
20525Ubiquitin-conjugating enzyme
516Isocitrate/isopropylmalate dehydrogenase
213Ribosomal Proteins L2, RNA binding domain
33Hsp90 protein
22Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11Dihydrofolate reductase
112Cysteine-rich secretory protein family
224Ribosomal protein S3, C-terminal domain
9211Cupin
33Chalcone and stilbene synthases, N-terminal domain
2132-oxoacid dehydrogenases acyltransferase (catalytic domain)
5712Catalase
11Disintegrin
527Aminotransferase class-III
235Ribosomal protein S19
11DNA gyrase B
33Thiamine pyrophosphate enzyme, central domain
314Lyase
22Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
112Adenylate and Guanylate cyclase catalytic domain
11ATP synthase delta (OSCP) subunit
112Orotidine 5'-phosphate decarboxylase / HUMPS family
11Indole-3-glycerol phosphate synthase
11Aromatic amino acid lyase
11Pyruvate kinase, barrel domain
10919Kinesin motor domain
221335DnaJ domain
14519Proteasome subunit
819Major intrinsic protein
11ATP synthase
224Glycosyl hydrolase family 1
113'5'-cyclic nucleotide phosphodiesterase
11Profilin
235Ribosomal protein L22p/L17e
224Ribosomal protein L14p/L23e
12517Ubiquitin family
426Cofilin/tropomyosin-type actin-binding protein
2214-3-3 protein
22Alkaline phosphatase
11Zinc carboxypeptidase
533689Aldo/keto reductase family
13417Myb-like DNA-binding domain
538Forkhead domain
123Ribosomal protein L16p/L10e
11Ribosomal protein S14p/S29e
347FKBP-type peptidyl-prolyl cis-trans isomerase
11Glutathione peroxidase
224
13316Flavodoxin
11Calreticulin family
33Aminotransferase class-V
44Ribonucleotide reductase, small chain
441559DEAD/DEAH box helicase
593190Helicase conserved C-terminal domain
11EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
235Ribosomal protein L23
11Pyridoxal-dependent decarboxylase, C-terminal sheet domain
123Ribosomal protein L5
33Pyridoxal-dependent decarboxylase conserved domain
325Citrate synthase, C-terminal domain
415GHMP kinases N terminal domain
66Biotin carboxylase, N-terminal domain
11Tryptophan synthase alpha chain
10414Pyridoxal-phosphate dependent enzyme
11819NUDIX domain
22pfkB family carbohydrate kinase
3710Glycosyl hydrolases family 28
224Ribosomal protein L3
235Ribosomal protein L11, RNA binding domain
628Histidine phosphatase superfamily (branch 1)
112Thymidylate synthase
415ATP synthase alpha/beta chain, C terminal domain
415Calponin homology (CH) domain
44Glutamine amidotransferases class-II
123Ribosomal protein S15
33Thaumatin family
11Fructose-1-6-bisphosphatase, N-terminal domain
11Ribonucleotide reductase, all-alpha domain
224Ribosomal protein S2
224SRF-type transcription factor (DNA-binding and dimerisation domain)
7411GATA zinc finger
16925Amino acid permease
224Prolyl oligopeptidase family
123Ribosomal protein L30p/L7e
8412Histidine phosphatase superfamily (branch 2)
11Respiratory-chain NADH dehydrogenase, 30 Kd subunit
44Aconitase family (aconitate hydratase)
6410Glycosyl hydrolase family 10
11Glycosyl hydrolases family 17
235Ribosomal protein S5, N-terminal domain
22Nucleoside diphosphate kinase
11Tetraspanin family
235Ribosomal protein S10p/S20e
33Arrestin (or S-antigen), N-terminal domain
112Phosphoglucose isomerase
11Carbohydrate phosphorylase
112SecY translocase
11Respiratory-chain NADH dehydrogenase, 49 Kd subunit
224Ribosomal protein L6
336Polyprenyl synthetase
22Hexokinase
516Dynamin family
11Transcription factor TFIID (or TATA-binding protein, TBP)
33Rieske [2Fe-2S] domain
819Biotin-requiring enzyme
11Phosphofructokinase
224Ribosomal protein S17
11Hydroxymethylglutaryl-coenzyme A reductase
325FGGY family of carbohydrate kinases, N-terminal domain
8311Enoyl-CoA hydratase/isomerase
123Ribosomal protein S9/S16
22Transcription factor TFIIB repeat
549Cytidine and deoxycytidylate deaminase zinc-binding region
11Molybdopterin oxidoreductase
6161Chromo (CHRromatin Organisation MOdifier) domain
11Phosphatidylinositol-specific phospholipase C, Y domain
11Phosphatidylinositol-specific phospholipase C, X domain
6410D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
325Malic enzyme, N-terminal domain
226-phosphogluconate dehydrogenase, C-terminal domain
5611Multicopper oxidase
6410WW domain
112Ribosomal RNA adenine dimethylase
11658174WD domain, G-beta repeat
448Heavy-metal-associated domain
33Adenylate kinase
22Phosphoglucomutase/phosphomannomutase, C-terminal domain
257Ribosomal protein S8
123Ribosomal protein S11
5510LIM domain
314Regulator of chromosome condensation (RCC1) repeat
224Ribosomal protein S13/S18
22chorismate binding enzyme
33660s Acidic ribosomal protein
415Prenyltransferase and squalene oxidase repeat
415Protein kinase C terminal domain
11Single-strand binding protein family
11S-adenosylmethionine synthetase, N-terminal domain
10616Bromodomain
9514Acyl-CoA dehydrogenase, C-terminal domain
14822Ubiquitin carboxyl-terminal hydrolase
22Ribonuclease T2 family
426HSF-type DNA-binding
22SRP54-type protein, GTPase domain
123Urease alpha-subunit, N-terminal domain
21223Serine carboxypeptidase
77Phosphatidylinositol 3- and 4-kinase
213Transketolase, thiamine diphosphate binding domain
11Glycosyl hydrolases family 11
213Inositol monophosphatase family
33Glutaredoxin
22Isocitrate lyase family
11Serine hydroxymethyltransferase
33Iron-containing alcohol dehydrogenase
325Ribosomal protein L10
6612KOW motif
11Ribosomal protein L34
224RF-1 domain
314Sodium:solute symporter family
11Imidazoleglycerol-phosphate dehydratase
11DNA polymerase family A
11IMP dehydrogenase / GMP reductase domain
11Glucose-6-phosphate dehydrogenase, NAD binding domain
549Protein phosphatase 2C
11Nucleotidyl transferase
44Carbonic anhydrase
11Phosphoribulokinase / Uridine kinase family
6511Fatty acid desaturase
6915MutS domain V
123Delta-aminolevulinic acid dehydratase
33Arginase family
639MCM P-loop domain
11Squalene/phytoene synthase
8412FHA domain
30838AMP-binding enzyme
91827G-protein alpha subunit
152035HMG (high mobility group) box
6915His Kinase A (phospho-acceptor) domain
22Armadillo/beta-catenin-like repeat
231740Tetratricopeptide repeat
123Ion transport protein
11DNA gyrase/topoisomerase IV, subunit A
6612BRCA1 C Terminus (BRCT) domain
415Glycosyl transferases group 1
628Glycosyl transferase family 2
33SAM domain (Sterile alpha motif)
22linker histone H1 and H5 family
112Ribosomal protein L7/L12 C-terminal domain
112ribonuclease
123Urease, gamma subunit
314CoA-ligase
66Phosphopantetheine attachment site
134Formyl transferase
9413Metallopeptidase family M24
14519Leucine Rich Repeat
231033alpha/beta hydrolase fold
33RNA polymerase Rpb2, domain 6
314PB1 domain
22Staphylococcal nuclease homologue
77Rab-GTPase-TBC domain
11Tudor domain
224WH1 domain
44Zinc finger, ZZ type
112HRDC domain
819CBS domain
224Ribosomal protein L13
224Ribosomal protein L4/L1 family
112Clp protease
235S1 RNA binding domain
66AhpC/TSA family
44tRNA synthetases class I (W and Y)
11UvrD/REP helicase N-terminal domain
66Rhodanese-like domain
134Universal stress protein family
241539Acetyltransferase (GNAT) family
11SecE/Sec61-gamma subunits of protein translocation complex
112C-terminal regulatory domain of Threonine dehydratase
224AIR synthase related protein, N-terminal domain
617tRNA synthetase class II core domain (G, H, P, S and T)
33Phage integrase family
213Tetrapyrrole (Corrin/Porphyrin) Methylases
11Glycosyl transferase family, a/b domain
213Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
22Fes/CIP4, and EFC/F-BAR homology domain
44IQ calmodulin-binding motif
22Phosphoinositide 3-kinase family, accessory domain (PIK domain)
415Phospholipase D Active site motif
11Regulator of G protein signaling domain
415GTPase-activator protein for Ras-like GTPase
617RasGEF domain
112RasGEF N-terminal motif
11819RhoGAP domain
8513RhoGEF domain
437SPRY domain
33RNA polymerase Rpb1, domain 2
11Guanylate kinase
44Gelsolin repeat
729UBA/TS-N domain
111021PHD-finger
11GGL domain
44HECT-domain (ubiquitin-transferase)
426Helix-hairpin-helix motif
11MSP (Major sperm protein) domain
235Ribonuclease III domain
22Region in Clathrin and VPS
314RanBP1 domain
224PPIC-type PPIASE domain
11Zn-finger in Ran binding protein and others
18927Zinc finger C-x8-C-x5-C-x3-H type (and similar)
112Poly(ADP-ribose) polymerase catalytic domain
112Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
100130230F-box domain
11Elongation factor 1 gamma, conserved domain
358Copper fist DNA binding domain
628CRAL/TRIO domain
72128BTB/POZ domain
41317Ricin-type beta-trefoil lectin domain
123Inhibitor of Apoptosis domain
22Voltage gated chloride channel
279Caspase domain
639GDSL-like Lipase/Acylhydrolase
11Poly-adenylate binding protein, unique domain
11POLO box duplicated region
20727ABC transporter transmembrane region
8210FAD binding domain
33Condensation domain
11S-adenosyl-L-homocysteine hydrolase, NAD binding domain
123HAMP domain
123ribosomal L5P family C-terminus
66Insulinase (Peptidase family M16)
44Dehydrogenase E1 component
112Lumazine binding domain
7310Elongation factor G C-terminus
426HMGL-like
55DnaJ central domain
224Starch binding domain
235Ribosomal protein L1p/L10e family
415Cation transporting ATPase, C-terminus
437Cation transporter/ATPase, N-terminus
6767dUTPase
44Aconitase C-terminal domain
314Amino acid kinase family
11N-(5'phosphoribosyl)anthranilate (PRA) isomerase
145Acyl transferase domain
123Urease beta subunit
44Dihydrodipicolinate synthetase family
25833haloacid dehalogenase-like hydrolase
134Glycosyl hydrolases family 2
101424Glycosyl hydrolases family 18
11Proliferating cell nuclear antigen, N-terminal domain
11Acylphosphatase
11Adenylosuccinate synthetase
112Asparaginase, N-terminal
224Peptidase S24-like
112Inorganic pyrophosphatase
3710Glycosyl hydrolases family 16
224Glycosyl hydrolases family 15
5914NADH:flavin oxidoreductase / NADH oxidase family
1123-hydroxyacyl-CoA dehydrogenase, C-terminal domain
347Glycosyl hydrolase family 20, catalytic domain
459HhH-GPD superfamily base excision DNA repair protein
112AIR carboxylase
311748GMC oxidoreductase
11Asparagine synthase
2828Fungal cellulose binding domain
516Septin
11EF-1 guanine nucleotide exchange domain
11Homoserine dehydrogenase
22tRNA synthetases class I (E and Q), catalytic domain
11tRNA synthetases class I (R)
628XPG N-terminal domain
7512Metallo-beta-lactamase superfamily
55Choline/Carnitine o-acyltransferase
11Putative esterase
11Glycosyl hydrolase family 9
11Ferrochelatase
22Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
11Arginosuccinate synthase
112Electron transfer flavoprotein FAD-binding domain
314RNB domain
426Dioxygenase
22CNH domain
11Diacylglycerol kinase catalytic domain
5813Dual specificity phosphatase, catalytic domain
11MyTH4 domain
538P21-Rho-binding domain
14216PX domain
213Ras association (RalGDS/AF-6) domain
415UBX domain
516VHS domain
22Phosphoinositide 3-kinase C2
224DAHP synthetase I family
415Carbon-nitrogen hydrolase
11Prephenate dehydratase
437Syntaxin
55Pumilio-family RNA binding repeat
516Histone-like transcription factor (CBF/NF-Y) and archaeal histone
11Pterin binding enzyme
112ER lumen protein retaining receptor
123Glycoprotease family
11Histidinol dehydrogenase
314impB/mucB/samB family
123
134Ribosomal L15
123Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11Ribosomal prokaryotic L21 protein
112Ribosomal L28 family
112Ribosomal L29 protein
112Ribosomal L39 protein
11Ribosomal S17
11Ribulose-phosphate 3 epimerase family
11Translationally controlled tumour protein
77Glycosyl hydrolase family 7
235RNA pseudouridylate synthase
8210Histone deacetylase domain
11POT family
22PWWP domain
549SET domain
88Isochorismatase family
22Permease family
112Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
7310XPG I-region
112Acetokinase family
112DNA photolyase
145Cytosol aminopeptidase family, catalytic domain
116,7-dimethyl-8-ribityllumazine synthase
11Ribosomal protein S16
325Acyl CoA binding protein
33Cullin family
22FAD binding domain
8715O-methyltransferase domain
22EamA-like transporter family
314
819ThiF family
112Ribosomal family S4e
11Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
22Ammonium Transporter Family
44Sulfate permease family
11MATH domain
213Dehydratase family
11Transaldolase/Fructose-6-phosphate aldolase
22Mechanosensitive ion channel
22GTP cyclohydrolase II
113,4-dihydroxy-2-butanone 4-phosphate synthase
314Adaptor complexes medium subunit family
44Exonuclease
123Dipeptidyl peptidase IV (DPP IV) N-terminal region
22NB-ARC domain
10919Glycosyl hydrolase family 3 N terminal domain
112Ribosomal protein L44
11Sodium:sulfate symporter transmembrane region
11DNA-dependent RNA polymerase
11Glycosyl transferase family 4
112HCO3- transporter family
22Nucleosome assembly protein (NAP)
33Synaptobrevin
11GMP synthase C terminal domain
314Adenosine/AMP deaminase
516Oxidoreductase FAD-binding domain
11Thioesterase domain
22Histidine biosynthesis protein
33Glycosyltransferase family 20
11UDP-glucose/GDP-mannose dehydrogenase family, central domain
22Carbamoyl-phosphate synthase small chain, CPSase domain
112Probable molybdopterin binding domain
415Sec1 family
11GDP dissociation inhibitor
314Sodium/hydrogen exchanger family
213RNA polymerase Rpb3/RpoA insert domain
459Initiation factor 2 subunit family
112Electron transfer flavoprotein domain
11Uricase
112Ribosomal S3Ae family
11Ribosomal L27 protein
314GTP1/OBG
213Gamma-glutamyltranspeptidase
11Ribosomal L40e family
11GrpE
213TatD related DNase
22Inhibitor of apoptosis-promoting Bax1
11Eukaryotic DNA topoisomerase I, catalytic core
33Dynamin central region
1236-O-methylguanine DNA methyltransferase, DNA binding domain
55Bacteriorhodopsin-like protein
22Carboxyl transferase domain
7512UbiA prenyltransferase family
448Endoribonuclease L-PSP
11Cadherin cytoplasmic region
639Cys/Met metabolism PLP-dependent enzyme
6713Glycosyl hydrolases family 31
11NADH ubiquinone oxidoreductase, 20 Kd subunit
22Amino-transferase class IV
448CDP-alcohol phosphatidyltransferase
11Calpain large subunit, domain III
437ATP dependent DNA ligase domain
729FMN-dependent dehydrogenase
112Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
3253-beta hydroxysteroid dehydrogenase/isomerase family
11Glycosyl hydrolases family 38 N-terminal domain
213Nitrite and sulphite reductase 4Fe-4S domain
22Ribosomal protein S18
112Galactose-1-phosphate uridyl transferase, N-terminal domain
325Ubiquitin carboxyl-terminal hydrolase, family 1
11
112Ribosomal protein S19e
112Ribosomal protein S6e
235Pectinesterase
33Transcription factor S-II (TFIIS)
112Surface antigen
426emp24/gp25L/p24 family/GOLD
11NifU-like domain
11Cyclin-dependent kinase regulatory subunit
112Asparaginase
11F-actin capping protein, beta subunit
11Fructose-bisphosphate aldolase class-II
22Semialdehyde dehydrogenase, NAD binding domain
213DNA mismatch repair protein, C-terminal domain
11Dephospho-CoA kinase
11MAPEG family
11G10 protein
11Heme oxygenase
11Succinate dehydrogenase/Fumarate reductase transmembrane subunit
112DNA topoisomerase
123Glucose inhibited division protein A
11Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
112RNA 3'-terminal phosphate cyclase
443' exoribonuclease family, domain 1
11tRNA pseudouridine synthase D (TruD)
11Coenzyme A transferase
426SPFH domain / Band 7 family
314Cytidylyltransferase family
11Formamidopyrimidine-DNA glycosylase N-terminal domain
213GDA1/CD39 (nucleoside phosphatase) family
11GNS1/SUR4 family
11Hydroxymethylglutaryl-coenzyme A synthase N terminal
112Inosine-uridine preferring nucleoside hydrolase
123Ribosomal protein L21e
11Ribosomal protein L36e
112Ribosomal protein L6e
426Phosphatidylethanolamine-binding protein
11
224RIO1 family
112Alanine racemase, N-terminal domain
11Uncharacterized protein family UPF0016
11PP-loop family
11Shwachman-Bodian-Diamond syndrome (SBDS) protein
112SNO glutamine amidotransferase family
123Translation initiation factor 1A / IF-1
11Asp/Glu/Hydantoin racemase
22Copper amine oxidase, enzyme domain
11Dihydroorotate dehydrogenase
22Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
11Glycosyl hydrolases family 25
112GPR1/FUN34/yaaH family
16218Fungal hydrophobin
145Macrophage migration inhibitory factor (MIF)
224
3316S rRNA methyltransferase RsmB/F
11RNA polymerase Rpb5, C-terminal domain
11RNA polymerase Rpb6
426RNA polymerase Rpb3/Rpb11 dimerisation domain
11RNA polymerases N / 8 kDa subunit
11Peptidyl-tRNA hydrolase
112Ribosomal protein L17
123Ribosomal protein L31e
11Ribosomal protein L34e
11Ribosomal protein S28e
224Ribosomal protein S8e
11Shikimate kinase
235Trehalase
22Uncharacterized protein family UPF0029
336Dihydrouridine synthase (Dus)
11Uroporphyrinogen decarboxylase (URO-D)
628ubiE/COQ5 methyltransferase family
11NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
123Adenylate cyclase associated (CAP) N terminal
213Casein kinase II regulatory subunit
11Cytochrome c oxidase subunit Vb
44Clathrin adaptor complex small chain
224Coproporphyrinogen III oxidase
11Dynein light chain type 1
22Ergosterol biosynthesis ERG4/ERG24 family
11DNA/RNA non-specific endonuclease
112Formate/nitrite transporter
11GTP cyclohydrolase I
55HIT domain
213Indoleamine 2,3-dioxygenase
11Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain
44Oxysterol-binding protein
213Phosphomannose isomerase type I
22Protein prenyltransferase alpha subunit repeat
257Pyridoxamine 5'-phosphate oxidase
11Membrane dipeptidase (Peptidase family M19)
235Ribosomal protein L24e
123Ribosomal protein L35Ae
6814Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
112Ribosomal protein S21e
112Ribosomal protein S7e
369Translation initiation factor SUI1
112Putative undecaprenyl diphosphate synthase
123Carbohydrate kinase
11Thioredoxin-like [2Fe-2S] ferredoxin
112SAICAR synthetase
112Xylose isomerase-like TIM barrel
33Alanine dehydrogenase/PNT, C-terminal domain
44Aldose 1-epimerase
112Chorismate synthase
22Cytochrome c/c1 heme lyase
44FAD dependent oxidoreductase
112F-actin capping protein alpha subunit
11Formate--tetrahydrofolate ligase
11Fibrillarin
11Malate synthase
112Ribosomal protein L19e
112Ribosomal protein S24e
123Ribosomal protein S26e
123Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
117,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
11Phosphoenolpyruvate carboxykinase
134Ribosomal protein L13e
112Telomere recombination
325Glycosyl hydrolases family 35
336CAP-Gly domain
112
11DSBA-like thioredoxin domain
123mRNA capping enzyme, catalytic domain
8210OB-fold nucleic acid binding domain
11Glycosyl hydrolases family 6
4610Kelch motif
11Ribonuclease HII
322860
415FYVE zinc finger
11DHH family
235Sec7 domain
22NAD dependent epimerase/dehydratase family
11Porphobilinogen deaminase, dipyromethane cofactor binding domain
11SIS domain
11Helix-turn-helix
11ARID/BRIGHT DNA binding domain
11Clathrin propeller repeat
718JAB1/Mov34/MPN/PAD-1 ubiquitin protease
13215PCI domain
11tRNA synthetases class I (C) catalytic domain
7411Oxidoreductase family, NAD-binding Rossmann fold
224tRNA synthetases class II core domain (F)
11tRNA synthetases class II (A)
347Putative GTPase activating protein for Arf
224tRNA pseudouridine synthase
55ENTH domain
11Reprolysin (M12B) family zinc metalloprotease
112NF-X1 type zinc finger
13922LSM domain
213R3H domain
12214Amidase
448BAH domain
22AN1-like Zinc finger
11Peptidase family M13
235Peptidase family M3
55Peptidase family M1 domain
33Peptidase family M41
22Peptidase family M48
11Acetohydroxy acid isomeroreductase, catalytic domain
11Low molecular weight phosphotyrosine protein phosphatase
22Eukaryotic porin
22Transglycosylase SLT domain
112Skp1 family, dimerisation domain
426Cytidylyltransferase-like
11Pyroglutamyl peptidase
33PUA domain
11Class-II DAHP synthetase family
55LysM domain
448S4 domain
112PWI domain
11Proprotein convertase P-domain
718IBR domain, a half RING-finger domain
11Type I 3-dehydroquinase
11Shikimate / quinate 5-dehydrogenase
628Transmembrane amino acid transporter protein
11Frataxin-like domain
11GXGXG motif
51217FAD binding domain
123
11V-type ATPase 116kDa subunit family
11Transposase
7613Glycosyl transferase family 8
11Phosphoribosyl-AMP cyclohydrolase
11Phosphoribosyl-ATP pyrophosphohydrolase
314Phosphatidylinositol-4-phosphate 5-Kinase
22Phosphoadenosine phosphosulfate reductase family
22TruB family pseudouridylate synthase (N terminal domain)
11Respiratory-chain NADH dehydrogenase 51 Kd subunit
22ATP-NAD kinase
11Iron-sulphur cluster biosynthesis
6612Polysaccharide deacetylase
44DHHC palmitoyltransferase
5712Glycosyl hydrolase family 47
9514PPR repeat
11Adenosylmethionine decarboxylase
11GIY-YIG catalytic domain
415CorA-like Mg2+ transporter protein
415Cation efflux family
9110Peptidase family M20/M25/M40
44Acyltransferase
213MatE
66DnaJ C terminal domain
33Fumarylacetoacetate (FAA) hydrolase family
11Pyruvate ferredoxin/flavodoxin oxidoreductase
11Hepatitis C virus non-structural protein E2/NS1
22Spermine/spermidine synthase domain
14721FAD binding domain
224Natural resistance-associated macrophage protein
314PAP2 superfamily
22Aminomethyltransferase folate-binding domain
33MaoC like domain
33Adenylylsulphate kinase
8311G-patch domain
11Putative tRNA binding domain
123GAF domain
2136-phosphofructo-2-kinase
112NifU-like N terminal domain
426Flavin containing amine oxidoreductase
33Cyclin M transmembrane N-terminal domain
11O-methyltransferase
11Glycine cleavage H-protein
33
112Ribosomal protein S27a
8311Adaptin N terminal region
11Protein phosphatase 2A regulatory B subunit (B56 family)
11I/LWEQ domain
11Transposase DDE domain
5273'-5' exonuclease
11Flavin reductase like domain
11Proline dehydrogenase
437MutS domain I
11Peptide methionine sulfoxide reductase
123Hpt domain
11Choline/ethanolamine kinase
11ATP phosphoribosyltransferase
11Phosphotransferase enzyme family
112SelR domain
44Chitin synthase
11Conserved region in glutamate synthase
2134'-phosphopantetheinyl transferase superfamily
11Peptidase C13 family
358Eukaryotic initiation factor 4E
123Ribosomal protein L32
11Myo-inositol-1-phosphate synthase
11Macro domain
22Type I phosphodiesterase / nucleotide pyrophosphatase
213Ribosomal protein S27
224Glycosyl hydrolase family 12
11Metalloenzyme superfamily
336Proteolipid membrane potential modulator
11SOR/SNZ family
11Riboflavin kinase
44Rhomboid family
538Sodium/calcium exchanger protein
11Queuine tRNA-ribosyltransferase
44UTP--glucose-1-phosphate uridylyltransferase
11Transcriptional regulator
235Smr domain
11IPP transferase
459Cobalamin-independent synthase, Catalytic domain
123BolA-like protein
123Ham1 family
4913FtsJ-like methyltransferase
22Quinolinate phosphoribosyl transferase, C-terminal domain
22Patatin-like phospholipase
336Lysophospholipase catalytic domain
145Dienelactone hydrolase family
415STAS domain
11Poly A polymerase head domain
22ATP-sulfurylase
11Importin beta binding domain
112Toprim domain
231235MYND finger
11Acyl-CoA oxidase
112Sodium Bile acid symporter family
223-dehydroquinate synthase
7411Lipase (class 3)
112Ribosome recycling factor
112Na+ dependent nucleoside transporter N-terminus
11UreD urease accessory protein
123Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
11Ribosomal L22e protein family
112Ribosomal L27e protein family
123Ribosomal L28e protein family
112Ribosomal L37ae protein family
123Ribosomal L38e protein family
11Ribosomal L32p protein family
11NIF3 (NGG1p interacting factor 3)
11Alternative oxidase
22Glycolipid 2-alpha-mannosyltransferase
111627Ferric reductase like transmembrane component
33snoRNA binding domain, fibrillarin
11Surp module
112AICARFT/IMPCHase bienzyme
11ATP synthase subunit D
11Chorismate mutase type II
14317WSC domain
1212Peptidase A4 family
11IPT/TIG domain
213ACT domain
11DIL domain
224FF domain
213NAC domain
22Proteasome/cyclosome repeat
33MOZ/SAS family
224Putative diphthamide synthesis protein
11AMMECR1
112RibD C-terminal domain
224Domain found in IF2B/IF5
11Memo-like protein
11RNase P subunit p30
112Iron-sulfur cluster assembly protein
112RNA 2'-phosphotransferase, Tpt1 / KptA family
11DNA primase small subunit
123Rpp14/Pop5 family
112Diphthamide synthase
123Ribosomal protein L37e
112Nucleotidyltransferase domain
11Thiamine-binding protein
123eIF-6 family
8816Glycosyl hydrolase family 3 C-terminal domain
11Deoxyhypusine synthase
415Prefoldin subunit
11SRP19 protein
62850S ribosome-binding GTPase
123Ribosomal protein L14
11Uncharacterised protein family UPF0052
22Protein of unknown function DUF89
22TRAM domain
11Integral membrane protein DUF92
11Thi4 family
112ArgJ family
5510DJ-1/PfpI family
325HD domain
11MoaC family
22Hydantoinase/oxoprolinase
145tRNA intron endonuclease, catalytic C-terminal domain
314Survival protein SurE
11617Amidohydrolase family
11Mitochondrial biogenesis AIM24
11VIT family
11ATP synthase (F/14-kDa) subunit
11ATP synthase (E/31 kDa) subunit
11ATP synthase (C/AC39) subunit
11Translin family
11TFIIE alpha subunit
11N2,N2-dimethylguanosine tRNA methyltransferase
55BNR/Asp-box repeat
235eIF4-gamma/eIF5/eIF2-epsilon
11SCP-2 sterol transfer family
11SAP domain
11Arsenical pump membrane protein
112CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
11Cytochrome c oxidase subunit VIa
134Glycosyl hydrolase family 30 TIM-barrel domain
11MAS20 protein import receptor
224Melibiase
11Aromatic-di-Alanine (AdAR) repeat
32528Pheromone A receptor
11SURF4 family
11Palmitoyl protein thioesterase
11260Kd inner membrane protein
11SURF1 family
11DAD family
123Hydroxyethylthiazole kinase family
11cAMP phosphodiesterases class-II
11RHO protein GDP dissociation inhibitor
11Aminopeptidase I zinc metalloprotease (M18)
11Fungalysin metallopeptidase (M36)
5611Permease for cytosine/purines, uracil, thiamine, allantoin
33
33Nuclear transport factor 2 (NTF2) domain
112Adenosine-deaminase (editase) domain
11Beige/BEACH domain
11DENN (AEX-3) domain
22MGS-like domain
11Rap/ran-GAP
527Sir2 family
314Zn-finger in ubiquitin-hydrolases and other protein
33RNA polymerases M/15 Kd subunit
11Dihydroneopterin aldolase
11Prephenate dehydrogenase
11Cytochrome C1 family
437PAZ domain
7411Piwi domain
10414AT hook motif
11Formin Homology 2 Domain
11SAD/SRA domain
22HAT (Half-A-TPR) repeat
112Hr1 repeat
11Growth-Arrest-Specific Protein 2 Domain
22ATP-dependent protease La (LON) substrate-binding domain
11PXA domain
11Regulatory subunit of type II PKA R-subunit
11STE like transcription factor
22SWIB/MDM2 domain
112Vacuolar sorting protein 9 (VPS9) domain
22WH2 motif
112Putative zinc finger in N-recognin (UBR box)
415Dynamin GTPase effector domain
213GYF domain
22Methylenetetrahydrofolate reductase
11ML domain
213ATP-grasp domain
11Thymidylate kinase
516PA domain
22Transcriptional Coactivator p15 (PC4)
22Phospholipase/Carboxylesterase
11
11NAD(P) transhydrogenase beta subunit
11Proteasome activator pa28 beta subunit
11RFX DNA-binding domain
33FAT domain
22FATC domain
224S1/P1 Nuclease
11Transcription initiation factor IIA, gamma subunit, helical domain
22Transcription initiation factor IID, 18kD subunit
11TFIIF, beta subunit HTH domain
11Ubiquinol-cytochrome C reductase complex 14kD subunit
11DHHA1 domain
11Polysaccharide lyase family 8, super-sandwich domain
11Cytochrome c oxidase subunit Va
11Transcription initiation factor IID, 31kD subunit
22
11Alpha adaptin AP2, C-terminal domain
112Cytochrome oxidase c subunit VIb
123HORMA domain
11Ubiquinol-cytochrome C reductase hinge protein
11Mitochondrial glycoprotein
22OTU-like cysteine protease
112Glycine cleavage system P-protein
336Mycolic acid cyclopropane synthetase
11Trehalose-phosphatase
11Cell division protein 48 (CDC48), N-terminal domain
221,3-beta-glucan synthase component
33Dolichyl-phosphate-mannose-protein mannosyltransferase
729JmjC domain, hydroxylase
11Anion-transporting ATPase
224jmjN domain
44SacI homology domain
257Cation transport protein
11Putative methyltransferase
112MoaE protein
11Seryl-tRNA synthetase N-terminal domain
11Ornithine cyclodeaminase/mu-crystallin family
11Conserved carboxylase domain
11Flavoprotein
11Lecithin:cholesterol acyltransferase
11Transferase family
11Patched family
538RecF/RecN/SMC N terminal domain
11Competence-damaged protein
415Tim17/Tim22/Tim23/Pmp24 family
628Fasciclin domain
112Met-10+ like-protein
44
11CLN3 protein
11
213CobW/HypB/UreG, nucleotide-binding domain
44CoA-transferase family III
112Oligosaccharyl transferase STT3 subunit
11CPBP intramembrane metalloprotease
151227Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
639ZIP Zinc transporter
11CrcB-like protein, Camphor Resistance (CrcB)
112Hydantoinase B/oxoprolinase
11NAD synthase
2133-oxo-5-alpha-steroid 4-dehydrogenase
112Ketopantoate hydroxymethyltransferase
112Acyl-CoA thioesterase
11Ketopantoate reductase PanE/ApbA
11Cyanate lyase C-terminal domain
11OsmC-like protein
11Pantoate-beta-alanine ligase
11Homocysteine S-methyltransferase
11D-Tyr-tRNA(Tyr) deacylase
112Thiamine monophosphate synthase
11Uncharacterised ACR, YagE family COG1723
112SOS response associated peptidase (SRAP)
11Uroporphyrinogen-III synthase HemD
11Carboxyltransferase domain, subdomain A and B
11Cytochrome oxidase assembly protein
213CoA binding domain
11SCO1/SenC
213Putative S-adenosyl-L-methionine-dependent methyltransferase
11GatB domain
11Domain of unknown function (DUF202)
77Fic/DOC family
819Phosphatidylserine decarboxylase
639Taurine catabolism dioxygenase TauD, TfdA family
156Paired amphipathic helix repeat
22Pirin
11(2R)-phospho-3-sulfolactate synthase (ComA)
112Carboxyltransferase domain, subdomain C and D
11Uncharacterized ACR, YdiU/UPF0061 family
22K+ potassium transporter
617Calcium-dependent channel, 7TM region, putative phosphate
5611
112CDC45-like protein
11Copper amine oxidase, N2 domain
11Copper amine oxidase, N3 domain
22Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
11SKIP/SNW domain
112ERCC4 domain
11Dak1 domain
11DAK2 domain
213Ku70/Ku80 beta-barrel domain
22Myosin N-terminal SH3-like domain
1123-hydroxyacyl-CoA dehydrogenase, NAD binding domain
112Galactose-1-phosphate uridyl transferase, C-terminal domain
224Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
11Proliferating cell nuclear antigen, C-terminal domain
22Quinolinate phosphoribosyl transferase, N-terminal domain
11Transcription initiation factor IIA, gamma subunit
123Arrestin (or S-antigen), C-terminal domain
224AIR synthase related protein, C-terminal domain
8412Acyl-CoA dehydrogenase, middle domain
347Acyl-CoA dehydrogenase, N-terminal domain
11S-adenosylmethionine synthetase, central domain
11S-adenosylmethionine synthetase, C-terminal domain
22Semialdehyde dehydrogenase, dimerisation domain
112Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
314Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
415Iron/manganese superoxide dismutases, C-terminal domain
617Transketolase, pyrimidine binding domain
415Transketolase, C-terminal domain
11Glucose-6-phosphate dehydrogenase, C-terminal domain
22FGGY family of carbohydrate kinases, C-terminal domain
11Pyridoxal-dependent decarboxylase, pyridoxal binding domain
55Biotin carboxylase C-terminal domain
77Carbamoyl-phosphate synthase L chain, ATP binding domain
22Carbamoyl-phosphate synthetase large chain, oligomerisation domain
11Cytosol aminopeptidase family, N-terminal domain
11DDT domain
11Mago nashi protein
33Chalcone and stilbene synthases, C-terminal domain
121123Glutathione S-transferase, N-terminal domain
11Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain
11Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
134Beta-ketoacyl synthase, C-terminal domain
639Thiolase, C-terminal domain
11Alpha amylase, C-terminal all-beta domain
7310Ubiquitin interaction motif
11Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
33MIR domain
22Alpha-kinase family
314e3 binding domain
11ATP synthase, Delta/Epsilon chain, beta-sandwich domain
314TGS domain
8412D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
11Glycosyl hydrolases family 2, TIM barrel domain
134Glycosyl hydrolase family 20, domain 2
358Carbohydrate binding domain
11Prp18 domain
112
112Phosphoribosylglycinamide synthetase, C domain
112Phosphoribosylglycinamide synthetase, N domain
224CUE domain
336MA3 domain
44Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
5510MIF4G domain
11Clp amino terminal domain, pathogenicity island component
22lactate/malate dehydrogenase, alpha/beta C-terminal domain
11Ribonucleotide reductase, barrel domain
1125'-nucleotidase, C-terminal domain
44ATP synthase alpha/beta family, beta-barrel domain
112Poly(ADP-ribose) polymerase, regulatory domain
33Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
33Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
22Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
11SRP54-type protein, helical bundle domain
22Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
22Adaptin C-terminal domain
11Glycosyl transferase family, helical bundle domain
11Pyruvate kinase, alpha/beta domain
314Sec63 Brl domain
11MIZ/SP-RING zinc finger
112GRAM domain
437Oxidoreductase family, C-terminal alpha/beta domain
123Prolyl oligopeptidase, N-terminal beta-propeller domain
11Catalytic LigB subunit of aromatic ring-opening dioxygenase
257Ulp1 protease family, C-terminal catalytic domain
11Fumarate reductase flavoprotein C-term
44FAD linked oxidases, C-terminal domain
11Eukaryotic DNA topoisomerase I, DNA binding fragment
11Ubiquinol cytochrome reductase transmembrane region
112Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
112C5HC2 zinc finger
11Cell division protein 48 (CDC48), domain 2
11GatB/GatE catalytic domain
11Cytochrome c oxidase subunit IV
11UcrQ family
22mRNA capping enzyme, beta chain
415Tim10/DDP family zinc finger
11Ecdysteroid kinase
112Mitosis protein DIM1
11TATA box binding protein associated factor (TAF)
112Tubulin binding cofactor A
11Signal peptide binding domain
314Cyclin, C-terminal domain
11HEAT repeat
11Late embryogenesis abundant protein
112Endomembrane protein 70
11Autophagy pr