PFAM Domains • Wood Rot Fungi
Annotations/GenomesConpu1Dacsp1Dicsq1Fomme1Fompi3Glotr1_1Hetan2Pospl1Punst1Schco3SerlaS7_9_2Stehi1Trave1Wolco1TotalAnnotation Description
PFAMs
8,3286,8958,0727,6008,1747,9067,7113,2607,9088,5907,5269,0058,6147,825107,414
4741444150504213414342494747597ATPase family associated with various cellular activities (AAA)
4741383747353217434638484538552ABC transporter
444444454444453ATP synthase alpha/beta family, nucleotide-binding domain
11112118EGF-like domain
151614141414166141514151414195Elongation factor Tu GTP binding domain
101010121611128111311131111159Helix-loop-helix DNA-binding domain
1041477146896597106Hsp20/alpha crystallin family
129149169109781077127Hsp70 protein
881488873798887111KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
111111111111113SH2 domain
2622242825252614282724292521344SH3 domain
1291012101211111110121010140Actin
2320172028295122226051342630433Ankyrin repeat
6777777187777792ADP-ribosylation factor family
5228443540312817442629365339502Eukaryotic aspartyl protease
3233333133343340Cyclic nucleotide-binding domain
1111111211211116Cytochrome c
1137877616138115699Double-stranded RNA binding motif
141519151718159192016171816228EF hand
111111112122154Fe-4S binding domain
11111111111112Fibronectin type III domain
11111128Globin
381518191418119181522162515253Glutathione S-transferase, C-terminal domain
111121111111316Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
11Hemopexin
1077911108681110996121Homeodomain
11Laminin EGF domain
322242222222229lactate/malate dehydrogenase, NAD binding domain
11Lipocalin / cytosolic fatty-acid binding protein family
646576556774472Myosin head (motor domain)
226118172120170119134651381141522041851922,109Cytochrome P450
163120147244154148132792141621431571861522,201Protein kinase domain
251416171918155151116221619228Pyridine nucleotide-disulphide oxidoreductase
252722242526225262723252925331Ras family
91189997152112914910152Response regulator receiver domain
10181514911103134212139RNase H
6357605967686722647065656664857RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
33Retroviral aspartyl protease
161013324Reverse transcriptase (RNA-dependent DNA polymerase)
11Serpin (serine protease inhibitor)
11111112121114Copper/zinc superoxide dismutase (SODC)
2232223123223231Iron/manganese superoxide dismutases, alpha-hairpin domain
236533543225245Subtilase family
477631323042329304136393132508Sugar (and other) transporter
81081299101913101189127Thioredoxin
5555656265555570Tubulin/FtsZ family, GTPase domain
64372313353444von Willebrand factor type A domain
593350546748891766610038556054949Zinc finger, C2H2 type
5342594866515815577146565765744Zinc finger, C3HC4 type (RING finger)
1610311413301541462722105272842665Zinc knuckle
2222222222322229Protein-tyrosine phosphatase
107115829512694585598112751361131111,377short chain dehydrogenase
7146645153583731514741787362763Zinc-binding dehydrogenase
4545545354454461Thiolase, N-terminal domain
624681342631183884Beta-ketoacyl synthase, N-terminal domain
3323334333333392Fe-2S iron-sulfur cluster binding domain
11Papain family cysteine protease
121211111111115Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
87789777887109102Glutamine amidotransferase class-I
101010131011101101010101010135TCP-1/cpn60 chaperonin family
11ATP synthase A chain
6333733233343349Glutamine synthetase, catalytic domain
111111111111113Triosephosphate isomerase
15101412161114710911111111162E1-E2 ATPase
181219161514163142218161415212Core histone H2A/H2B/H3/H4
1111217Copper binding proteins, plastocyanin/azurin family
51085687391261368106Alpha amylase, catalytic domain
6565665355566675Phorbol esters/diacylglycerol binding domain (C1 domain)
275244474345455Bacterial transferase hexapeptide (six repeats)
3333333133333340tRNA synthetases class I (I, L, M and V)
1311128121410591317101010154Cyclin, N-terminal domain
3722242221171920252630322020335Carboxylesterase family
444344344444450DNA polymerase family B
3432333333333342ATP synthase subunit C
1114182112113217272102Peroxidase
512516526834117277Beta-lactamase
6345344346464359C-5 cytosine-specific DNA methylase
3031253027242314252426282727361Calcineurin-like phosphoesterase
14111215141111129614151312169Cellulase (glycosyl hydrolase family 5)
5575675166666677tRNA synthetases class II (D, K and N)
403637343837368383737373639490Mitochondrial carrier protein
231618141618145161615202016227Aminotransferase class I and II
776566757657680Phosphoribosyl transferase domain
111812121313137131413131414180Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111111111114Phosphoglycerate kinase
2222222222222228Ribosomal protein S4/S9 N-terminal domain
3223222222222230Ribosomal protein S12/S23
111111111121114Chaperonin 10 Kd subunit
129122913141910181813171413211C2 domain
171822181817224211917202021254PH domain
5556465566776477bZIP transcription factor
171119161813143151616221716213Aldehyde dehydrogenase family
6448778261555828558844858466895Fungal Zn(2)-Cys(6) binuclear cluster domain
2419232125282311212526252429324Cytochrome b5-like Heme/Steroid binding domain
4132352141454645Oxidoreductase molybdopterin binding domain
9111261110102111188159133Oxidoreductase NAD-binding domain
2821212021252110232222272026307SNF2 family N-terminal domain
2222222222223229Ribosomal protein S7p/S5e
192020212122215192120212021271Ubiquitin-conjugating enzyme
57566610155555576Isocitrate/isopropylmalate dehydrogenase
2222222122222227Ribosomal Proteins L2, RNA binding domain
222342223222230Hsp90 protein
222322222223228Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111111111112Dihydrofolate reductase
11Chitin recognition protein
3121221115232228Cysteine-rich secretory protein family
111111211111215Ribosomal protein S3, C-terminal domain
217264324326547Cupin
33333331433233402-oxoacid dehydrogenases acyltransferase (catalytic domain)
3332343722433446Catalase
1111111119Disintegrin
126731121119163UDP-glucoronosyl and UDP-glucosyl transferase
5555865265565573Aminotransferase class-III
2122222322222228Ribosomal protein S19
112111111111114DNA gyrase B
424334234324341Thiamine pyrophosphate enzyme, central domain
3333333143433342Lyase
121112122121118Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1113111111121117Adenylate and Guanylate cyclase catalytic domain
1111111111111ATP synthase delta (OSCP) subunit
111111111111113Orotidine 5'-phosphate decarboxylase / HUMPS family
112222132111120Indole-3-glycerol phosphate synthase
13121312331122Aromatic amino acid lyase
111111111111113Pyruvate kinase, barrel domain
9991071099111010898128Kinesin motor domain
2927282733303313283028343134405DnaJ domain
141414141414145141415141414188Proteasome subunit
6552463143355456Major intrinsic protein
111111111111113ATP synthase
3145252213332137Glycosyl hydrolase family 1
111111111111123'5'-cyclic nucleotide phosphodiesterase
111111111111113Profilin
2212212321221124Ribosomal protein L22p/L17e
2222222222222228Ribosomal protein L14p/L23e
141117161714195121316151716202Ubiquitin family
4655555257564569Cofilin/tropomyosin-type actin-binding protein
21122121222222214-3-3 protein
3211222323122Alkaline phosphatase
1111112121113Zinc carboxypeptidase
7257615655624236546043646754783Aldo/keto reductase family
121213111413124121111111212160Myb-like DNA-binding domain
6255955358456573Forkhead domain
112411121317Glycosyl hydrolases family 32 N-terminal domain
111111121111114Ribosomal protein L16p/L10e
121122212212221Ribosomal protein S14p/S29e
56331233435343360FKBP-type peptidyl-prolyl cis-trans isomerase
1111111112112Glutathione peroxidase
1212222222122225
5967576377556482Flavodoxin
11Protamine P1
112Tropomyosin
111111111111113Calreticulin family
133132331375237Common central domain of tyrosinase
8676777598810896Aminotransferase class-V
212122213153227Ribonucleotide reductase, small chain
5739524163504315506652544651679DEAD/DEAH box helicase
91688969838677318797919176881,124Helicase conserved C-terminal domain
11121118Fructose-bisphosphate aldolase class-I
111131111121217EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2222221322222228Ribosomal protein L23
111111111111113Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111111211111115Ribosomal protein L5
354445547554459Pyridoxal-dependent decarboxylase conserved domain
2333333233333441Citrate synthase, C-terminal domain
4455555155555564GHMP kinases N terminal domain
766666665667982Biotin carboxylase, N-terminal domain
111111111113115Tryptophan synthase alpha chain
799811984889101110121Pyridoxal-phosphate dependent enzyme
111115151515178141417161515198NUDIX domain
323435446453349pfkB family carbohydrate kinase
13671412108713371799135Glycosyl hydrolases family 28
2222222223222229Ribosomal protein L3
2121222312222226Ribosomal protein L11, RNA binding domain
9977878210971079109Histidine phosphatase superfamily (branch 1)
1111111111111114Thymidylate synthase
4444444144444453ATP synthase alpha/beta chain, C terminal domain
4544544145544457Calponin homology (CH) domain
555545545665464Glutamine amidotransferases class-II
2222222222222228Ribosomal protein S15
116481384411598495Thaumatin family
111111111111113Fructose-1-6-bisphosphatase, N-terminal domain
111111121122116Ribonucleotide reductase, all-alpha domain
223322221221226Ribosomal protein S2
2221232254232234SRF-type transcription factor (DNA-binding and dimerisation domain)
10141099109412121012910140GATA zinc finger
331924212325199222125302423318Amino acid permease
108466652471094687Prolyl oligopeptidase family
2121111221111118Ribosomal protein L30p/L7e
17101410151210411911141512164Histidine phosphatase superfamily (branch 2)
111111111111113Respiratory-chain NADH dehydrogenase, 30 Kd subunit
5547543444451064Aconitase family (aconitate hydratase)
3354332455166454Glycosyl hydrolase family 10
121111112111115Glycosyl hydrolases family 17
3222222322222230Ribosomal protein S5, N-terminal domain
122222222122224Nucleoside diphosphate kinase
12321212121119Tetraspanin family
11Galactoside-binding lectin
122221312122223Ribosomal protein S10p/S20e
3373423395347460Arrestin (or S-antigen), N-terminal domain
11112112111111126Phosphoglucose isomerase
111111111111113Carbohydrate phosphorylase
1111111111111114SecY translocase
111111112111114Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222222222228Ribosomal protein L6
4383355346683465Polyprenyl synthetase
322222222222227Hexokinase
7467967189978795Dynamin family
111111111121114Transcription factor TFIID (or TATA-binding protein, TBP)
343545442454350Rieske [2Fe-2S] domain
11Bacterial regulatory proteins, lacI family
112Phytochrome region
88888881998798107Biotin-requiring enzyme
111111111111113Phosphofructokinase
2132222222122227Ribosomal protein S17
111111111111113Hydroxymethylglutaryl-coenzyme A reductase
3334334243334345FGGY family of carbohydrate kinases, N-terminal domain
8681278836988812111Enoyl-CoA hydratase/isomerase
2222222222222228Ribosomal protein S9/S16
224422312222230Transcription factor TFIIB repeat
6665967466777890Cytidine and deoxycytidylate deaminase zinc-binding region
111211111111114Molybdopterin oxidoreductase
78111187211529139911159Chromo (CHRromatin Organisation MOdifier) domain
221112224221123Phosphatidylinositol-specific phospholipase C, Y domain
221112223221122Phosphatidylinositol-specific phospholipase C, X domain
710761066457697898D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
3132223223333436Malic enzyme, N-terminal domain
1121221121222206-phosphogluconate dehydrogenase, C-terminal domain
85131175206136621105136Multicopper oxidase
710791098410981178117WW domain
2122232122222227Ribosomal RNA adenine dimethylase
217111192190138123126581721321371511291392,015WD domain, G-beta repeat
3343334434345450Heavy-metal-associated domain
333333633333342Adenylate kinase
221221121211119Phosphoglucomutase/phosphomannomutase, C-terminal domain
1111212511111221Ribosomal protein S8
1111221221211119Ribosomal protein S11
5667565566765580LIM domain
4322332143242338Regulator of chromosome condensation (RCC1) repeat
1212222212211223Ribosomal protein S13/S18
11
223222212222226chorismate binding enzyme
333333332333334160s Acidic ribosomal protein
5445444144444556Prenyltransferase and squalene oxidase repeat
7467766167786684Protein kinase C terminal domain
111111111111113Single-strand binding protein family
111111111111113S-adenosylmethionine synthetase, N-terminal domain
1011812111017671110101010143Bromodomain
97108910857999109119Acyl-CoA dehydrogenase, C-terminal domain
141414141614138141715141415196Ubiquitin carboxyl-terminal hydrolase
1111111111111Ribosomal protein L36
322433241232233Ribonuclease T2 family
4554454244346458HSF-type DNA-binding
222222222222226SRP54-type protein, GTPase domain
1121111212111117Urease alpha-subunit, N-terminal domain
121218141016102221012142411187Serine carboxypeptidase
8888888888898105Phosphatidylinositol 3- and 4-kinase
2121222123232227Transketolase, thiamine diphosphate binding domain
1113Glycosyl hydrolases family 11
11111117WHEP-TRS domain
2233322127222235Inositol monophosphatase family
444444455444454Glutaredoxin
324334343344343Isocitrate lyase family
111121111111114Serine hydroxymethyltransferase
243344224253442Iron-containing alcohol dehydrogenase
2221222222222227Ribosomal protein L10
5445555655455568KOW motif
1111111111111114Ribosomal protein L34
2232323223333336RF-1 domain
4422443131442644Sodium:solute symporter family
1111111111111Imidazoleglycerol-phosphate dehydratase
111112111111316DNA polymerase family A
112131111111116IMP dehydrogenase / GMP reductase domain
111111112111114Glucose-6-phosphate dehydrogenase, NAD binding domain
88786610413131010810121Protein phosphatase 2C
333433321342337Nucleotidyl transferase
56253562445249Carbonic anhydrase
111111111111113Phosphoribulokinase / Uridine kinase family
7598111311591312151610144Fatty acid desaturase
56567669667661091MutS domain V