PFAM Domains • Volvox carteri nagariensis
The data on this Volvox portal is for archival use. Please note that the latest data is available at Phytozome.
Annotations/GenomesVolca1TotalAnnotation Description
PFAMs
3,4193,419
3737ATPase family associated with various cellular activities (AAA)
3030ABC transporter
22ATP synthase alpha/beta family, nucleotide-binding domain
11EGF-like domain
1010Elongation factor Tu GTP binding domain
11Hsp20/alpha crystallin family
55Hsp70 protein
44KH domain
11Kunitz/Bovine pancreatic trypsin inhibitor domain
22Actin
2828Ankyrin repeat
11PAN domain
1111ADP-ribosylation factor family
11Eukaryotic aspartyl protease
33Cyclic nucleotide-binding domain
3535EF hand
114Fe-4S binding domain
11Fibronectin type III domain
11Glutathione S-transferase, C-terminal domain
22Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
22Kazal-type serine protease inhibitor domain
44lactate/malate dehydrogenase, NAD binding domain
22Lectin C-type domain
22Myosin head (motor domain)
66Cytochrome P450
188188Protein kinase domain
88Pyridine nucleotide-disulphide oxidoreductase
77Ras family
33Response regulator receiver domain
3838RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
22Reverse transcriptase (RNA-dependent DNA polymerase)
22Iron/manganese superoxide dismutases, alpha-hairpin domain
22Subtilase family
77Sugar (and other) transporter
1111Thioredoxin
55Trypsin
99Tubulin/FtsZ family, GTPase domain
55Zinc finger, C2H2 type
2828Zinc finger, C3HC4 type (RING finger)
66Zinc knuckle
33Ribulose bisphosphate carboxylase, small chain
22Protein-tyrosine phosphatase
1717short chain dehydrogenase
55Zinc-binding dehydrogenase
33Thiolase, N-terminal domain
11Beta-ketoacyl synthase, N-terminal domain
992Fe-2S iron-sulfur cluster binding domain
44Papain family cysteine protease
11Enolase, C-terminal TIM barrel domain
11Cytochrome C oxidase subunit II, periplasmic domain
55Glutamine amidotransferase class-I
88TCP-1/cpn60 chaperonin family
22Glutamine synthetase, catalytic domain
55E1-E2 ATPase
4444Core histone H2A/H2B/H3/H4
22Copper binding proteins, plastocyanin/azurin family
1010Alpha amylase, catalytic domain
88Bacterial transferase hexapeptide (six repeats)
44tRNA synthetases class I (I, L, M and V)
1212Cyclin, N-terminal domain
33DNA polymerase family B
22ATP synthase subunit C
33Peroxidase
114Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
88Calcineurin-like phosphoesterase
55tRNA synthetases class II (D, K and N)
2222Mitochondrial carrier protein
77Aminotransferase class I and II
33Phosphoribosyl transferase domain
1616Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
22Phosphoglycerate kinase
11Ribosomal protein S12/S23
11Chaperonin 10 Kd subunit
66C2 domain
22PH domain
77Aldehyde dehydrogenase family
88Cytochrome b5-like Heme/Steroid binding domain
22Oxidoreductase molybdopterin binding domain
55Oxidoreductase NAD-binding domain
1212SNF2 family N-terminal domain
11Ribosomal protein S7p/S5e
1313Ubiquitin-conjugating enzyme
22Isocitrate/isopropylmalate dehydrogenase
11Ribosomal Proteins L2, RNA binding domain
33Hsp90 protein
11Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11Dihydrofolate reductase
1313Cysteine-rich secretory protein family
22Eukaryotic-type carbonic anhydrase
442-oxoacid dehydrogenases acyltransferase (catalytic domain)
11Catalase
44Aminotransferase class-III
11Ribosomal protein S19
11DNA gyrase B
11Thiamine pyrophosphate enzyme, central domain
11Lyase
22Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
22Ferritin-like domain
3939Adenylate and Guanylate cyclase catalytic domain
11ATP synthase delta (OSCP) subunit
11Orotidine 5'-phosphate decarboxylase / HUMPS family
11Bacterial DNA-binding protein
11Indole-3-glycerol phosphate synthase
44Pyruvate kinase, barrel domain
2626Kinesin motor domain
2222DnaJ domain
88Proteasome subunit
11Major intrinsic protein
11ATP synthase
12123'5'-cyclic nucleotide phosphodiesterase
11Ribosomal protein L22p/L17e
33Ribosomal protein L14p/L23e
1010Ubiquitin family
11Cofilin/tropomyosin-type actin-binding protein
1114-3-3 protein
11Zinc carboxypeptidase
55Aldo/keto reductase family
2222Myb-like DNA-binding domain
11Ribosomal protein L16p/L10e
11Ribosomal protein S14p/S29e
55FKBP-type peptidyl-prolyl cis-trans isomerase
33Glutathione peroxidase
11
55Flavodoxin
22Calreticulin family
11Thymidine kinase
44Aminotransferase class-V
3737DEAD/DEAH box helicase
5151Helicase conserved C-terminal domain
44Fructose-bisphosphate aldolase class-I
11EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
11Ribosomal protein L23
33Pyridoxal-dependent decarboxylase, C-terminal sheet domain
22Pyridoxal-dependent decarboxylase conserved domain
11Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits
11Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit
33Citrate synthase, C-terminal domain
22Biotin carboxylase, N-terminal domain
33Pyridoxal-phosphate dependent enzyme
99NUDIX domain
44pfkB family carbohydrate kinase
22Ribosomal protein L3
22Ribosomal protein L11, RNA binding domain
33Histidine phosphatase superfamily (branch 1)
11Rubredoxin
22Thymidylate synthase
22ATP synthase alpha/beta chain, C terminal domain
11Glutamine amidotransferases class-II
22Phosphoenolpyruvate carboxylase
22Ribosomal protein S15
11'Cold-shock' DNA-binding domain
22Fructose-1-6-bisphosphatase, N-terminal domain
11Ribonucleotide reductase, all-alpha domain
11Ribosomal protein S2
11SRF-type transcription factor (DNA-binding and dimerisation domain)
33GATA zinc finger
22Amino acid permease
44Prolyl oligopeptidase family
22Ribosomal protein L30p/L7e
11Respiratory-chain NADH dehydrogenase, 30 Kd subunit
22Aconitase family (aconitate hydratase)
33Nucleoside diphosphate kinase
22Ribosomal protein S10p/S20e
11SecY translocase
11Respiratory-chain NADH dehydrogenase, 49 Kd subunit
22Ribosomal protein L6
11Polyprenyl synthetase
11Hexokinase
33Dynamin family
11Transcription factor TFIID (or TATA-binding protein, TBP)
55Rieske [2Fe-2S] domain
44Biotin-requiring enzyme
33Phosphofructokinase
22FGGY family of carbohydrate kinases, N-terminal domain
11Sodium:dicarboxylate symporter family
66Enoyl-CoA hydratase/isomerase
11Ribosomal protein S9/S16
22Transcription factor TFIIB repeat
22Cytidine and deoxycytidylate deaminase zinc-binding region
11Molybdopterin oxidoreductase
11Chromo (CHRromatin Organisation MOdifier) domain
22D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
22Malic enzyme, N-terminal domain
22PEP-utilising enzyme, mobile domain
11Granulin
33WW domain
9090WD domain, G-beta repeat
22Heavy-metal-associated domain
33Adenylate kinase
11Phosphoglucomutase/phosphomannomutase, C-terminal domain
22Ribosomal protein S8
22Ribosomal protein S11
99Regulator of chromosome condensation (RCC1) repeat
11Ribosomal protein S13/S18
22chorismate binding enzyme
1160s Acidic ribosomal protein
11ATP synthase B/B' CF(0)
11Protein kinase C terminal domain
44Bromodomain
33Acyl-CoA dehydrogenase, C-terminal domain
1111Ubiquitin carboxyl-terminal hydrolase
22Ribonuclease T2 family
11HSF-type DNA-binding
33SRP54-type protein, GTPase domain
44Serine carboxypeptidase
22Ribosomal protein L20
77Phosphatidylinositol 3- and 4-kinase
11Transketolase, thiamine diphosphate binding domain
11WHEP-TRS domain
22Inositol monophosphatase family
33Glutaredoxin
11Isocitrate lyase family
33Serine hydroxymethyltransferase
11Iron-containing alcohol dehydrogenase
11Ribosomal protein L10
44KOW motif
11Ribosomal protein L34
22Ribosomal protein L33
11Sodium:solute symporter family
11Imidazoleglycerol-phosphate dehydratase
11IMP dehydrogenase / GMP reductase domain
11Glucose-6-phosphate dehydrogenase, NAD binding domain
99Protein phosphatase 2C
44Nucleotidyl transferase
22Carbonic anhydrase
22Phosphoribulokinase / Uridine kinase family
55Fatty acid desaturase
44MutS domain V
11Delta-aminolevulinic acid dehydratase
22MCM P-loop domain
11Squalene/phytoene synthase
33FHA domain
88AMP-binding enzyme
2121Chlorophyll A-B binding protein
66HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11Cytochrome c oxidase subunit III
22His Kinase A (phospho-acceptor) domain
66Armadillo/beta-catenin-like repeat
3131Tetratricopeptide repeat
77Ion transport protein
11Binding-protein-dependent transport system inner membrane component
1313Scavenger receptor cysteine-rich domain
22BRCA1 C Terminus (BRCT) domain
55Glycosyl transferases group 1
33Glycosyl transferase family 2
22SAM domain (Sterile alpha motif)
22Ribosomal protein L7/L12 C-terminal domain
11Nitrogen regulatory protein P-II
11CoA-ligase
11Phosphopantetheine attachment site
11Formyl transferase
44Metallopeptidase family M24
2121Leucine Rich Repeat
66alpha/beta hydrolase fold
22RNA polymerase Rpb2, domain 6
77Rab-GTPase-TBC domain
22Zinc finger, ZZ type
55CBS domain
22Ribosomal protein L13
11Ribosomal protein L4/L1 family
22Clp protease
22S1 RNA binding domain
11HIUase/Transthyretin family
33AhpC/TSA family
44tRNA synthetases class I (W and Y)
11UvrD/REP helicase N-terminal domain
11Rhodanese-like domain
22Universal stress protein family
1313Acetyltransferase (GNAT) family
11AIR synthase related protein, N-terminal domain
66tRNA synthetase class II core domain (G, H, P, S and T)
77SpoU rRNA Methylase family
22Tetrapyrrole (Corrin/Porphyrin) Methylases
55PDZ domain
11Class II Aldolase and Adducin N-terminal domain
44IQ calmodulin-binding motif
11Phosphoinositide 3-kinase family, accessory domain (PIK domain)
22SPRY domain
22RNA polymerase Rpb1, domain 2
33Guanylate kinase
11Gelsolin repeat
44UBA/TS-N domain
55PHD-finger
11Filamin/ABP280 repeat
77HECT-domain (ubiquitin-transferase)
11Helix-hairpin-helix motif
11BRCA2 repeat
11RanBP1 domain
22PPIC-type PPIASE domain
99Zinc finger C-x8-C-x5-C-x3-H type (and similar)
66F-box domain
88CRAL/TRIO domain
33BTB/POZ domain
33Voltage gated chloride channel
11Caspase domain
11GDSL-like Lipase/Acylhydrolase
11Poly-adenylate binding protein, unique domain
88ABC transporter transmembrane region
33Integrase core domain
33FAD binding domain
11S-adenosyl-L-homocysteine hydrolase, NAD binding domain
33Insulinase (Peptidase family M16)
33Dehydrogenase E1 component
55Elongation factor G C-terminus
11HMGL-like
22DnaJ central domain
11Sulfotransferase domain
44Starch binding domain
33Ribosomal protein L1p/L10e family
33Cation transporting ATPase, C-terminus
22Cation transporter/ATPase, N-terminus
22Aconitase C-terminal domain
55Amino acid kinase family
11N-(5'phosphoribosyl)anthranilate (PRA) isomerase
11Dihydrodipicolinate synthetase family
1616haloacid dehalogenase-like hydrolase
11Glycosyl hydrolases family 18
22Proliferating cell nuclear antigen, N-terminal domain
11Acylphosphatase
22Peptidase S24-like
33Inorganic pyrophosphatase
11NADH:flavin oxidoreductase / NADH oxidase family
223-hydroxyacyl-CoA dehydrogenase, C-terminal domain
44HhH-GPD superfamily base excision DNA repair protein
11Asparagine synthase
11Photosystem II 10 kDa phosphoprotein
22Homoserine dehydrogenase
11Glutamyl-tRNAGlu reductase, dimerisation domain
22tRNA synthetases class I (E and Q), catalytic domain
33XPG N-terminal domain
55Metallo-beta-lactamase superfamily
11Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
11RNB domain
66Dual specificity phosphatase, catalytic domain
11MyTH4 domain
11
22PX domain
33Carbon-nitrogen hydrolase
11Syntaxin
33Pentapeptide repeats (8 copies)
33Pumilio-family RNA binding repeat
33Histone-like transcription factor (CBF/NF-Y) and archaeal histone
22Pterin binding enzyme
33ER lumen protein retaining receptor
11Glycoprotease family
11Histidinol dehydrogenase
22impB/mucB/samB family
11
11Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11Ribosomal prokaryotic L21 protein
11Ribosomal L28 family
11Ribosomal L29 protein
11Ribosomal L39 protein
11Ribosomal S17
33AP2 domain
22RNA pseudouridylate synthase
88Histone deacetylase domain
11POT family
66SET domain
33Isochorismatase family
22Permease family
33XPG I-region
33DNA photolyase
22Sulfatase
22Acyl CoA binding protein
22Cullin family
33FAD binding domain
11O-methyltransferase domain
22EamA-like transporter family
55ThiF family
11Ribosomal family S4e
11Sec-independent protein translocase protein (TatC)
33Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
88Ammonium Transporter Family
11Sulfate permease family
22MATH domain
33Uncharacterized protein family UPF0004
11Dehydratase family
22Transaldolase/Fructose-6-phosphate aldolase
11Mechanosensitive ion channel
22GTP cyclohydrolase II
113,4-dihydroxy-2-butanone 4-phosphate synthase
11Adaptor complexes medium subunit family
77Exonuclease
11Ribosomal protein L44
11DNA-dependent RNA polymerase
11FAD binding domain in molybdopterin dehydrogenase
11Nucleosome assembly protein (NAP)
55Synaptobrevin
11LAGLIDADG endonuclease
22Adenosine/AMP deaminase
22Oxidoreductase FAD-binding domain
11Thioesterase domain
11Histidine biosynthesis protein
22Glycosyltransferase family 20
11UDP-glucose/GDP-mannose dehydrogenase family, central domain
11DNA gyrase B subunit, carboxyl terminus
11Carbamoyl-phosphate synthase small chain, CPSase domain
11PAS fold
11
33Sec1 family
11GDP dissociation inhibitor
11RNA polymerase Rpb3/RpoA insert domain
22Inward rectifier potassium channel transmembrane domain
33Initiation factor 2 subunit family
11Uricase
11Ribosomal L27 protein
33GTP1/OBG
11Gamma-glutamyltranspeptidase
11GrpE
11TatD related DNase
33Inhibitor of apoptosis-promoting Bax1
11Receptor L domain
22Dynamin central region
22Bacteriorhodopsin-like protein
44UbiA prenyltransferase family
11SecA preprotein cross-linking domain
33Cys/Met metabolism PLP-dependent enzyme
22Glycosyl hydrolases family 31
11NADH ubiquinone oxidoreductase, 20 Kd subunit
33Amino-transferase class IV
22CDP-alcohol phosphatidyltransferase
11ATP dependent DNA ligase domain
11FMN-dependent dehydrogenase
11Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
223-beta hydroxysteroid dehydrogenase/isomerase family
11Glycosyl hydrolases family 38 N-terminal domain
22Nitrite and sulphite reductase 4Fe-4S domain
11Magnesium chelatase, subunit ChlI
11Presenilin
22Ubiquitin carboxyl-terminal hydrolase, family 1
11
11Ribosomal protein S19e
11Ribosomal protein S6e
22Transcription factor S-II (TFIIS)
11Surface antigen
11emp24/gp25L/p24 family/GOLD
11Cyclin-dependent kinase regulatory subunit
11Semialdehyde dehydrogenase, NAD binding domain
11Dephospho-CoA kinase
11G10 protein
112-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
33DNA topoisomerase
22Elongation factor P (EF-P) OB domain
22Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
11Peptidase family U32
11RNA 3'-terminal phosphate cyclase
11tRNA-splicing ligase RtcB
55SPFH domain / Band 7 family
33Cytidylyltransferase family
11Formamidopyrimidine-DNA glycosylase N-terminal domain
11GDA1/CD39 (nucleoside phosphatase) family
11Hydroxymethylglutaryl-coenzyme A synthase N terminal
11Inosine-uridine preferring nucleoside hydrolase
11Ribosomal protein L21e
11Ribosomal protein L6e
11
11RIO1 family
11Tub family
11Alanine racemase, N-terminal domain
33Uncharacterized protein family UPF0016
22PP-loop family
11Shwachman-Bodian-Diamond syndrome (SBDS) protein
11SNO glutamine amidotransferase family
11Translation initiation factor 1A / IF-1
22Copper amine oxidase, enzyme domain
11Dihydroorotate dehydrogenase
11Macrophage migration inhibitory factor (MIF)
3316S rRNA methyltransferase RsmB/F
33RNA polymerase Rpb3/Rpb11 dimerisation domain
11RNA polymerases N / 8 kDa subunit
11Peptidyl-tRNA hydrolase
11Ribosomal protein L17
11Ribosomal protein L31
11Ribosomal protein S28e
11Ribosomal protein S8e
11Trehalase
22Uncharacterized protein family UPF0029
33Dihydrouridine synthase (Dus)
22Uroporphyrinogen decarboxylase (URO-D)
33ubiE/COQ5 methyltransferase family
11NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
11Adenylate cyclase associated (CAP) N terminal
11Clathrin adaptor complex small chain
11Coproporphyrinogen III oxidase
11Dynein light chain type 1
11Ergosterol biosynthesis ERG4/ERG24 family
44Formate/nitrite transporter
11GTP cyclohydrolase I
11Glycine radical
11HIT domain
11Phosphomannose isomerase type I
11Protein prenyltransferase alpha subunit repeat
33Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
11Ribosomal protein S21e
11Ribosomal protein S7e
11Translation initiation factor SUI1
22Putative undecaprenyl diphosphate synthase
22Carbohydrate kinase
11SAICAR synthetase
22Alanine dehydrogenase/PNT, C-terminal domain
11Aldose 1-epimerase
22Chorismate synthase
11Cytochrome c/c1 heme lyase
22FAD dependent oxidoreductase
11Formate--tetrahydrofolate ligase
11Ribosomal protein L19e
11Ribosomal protein L9, N-terminal domain
11Ribosomal protein S24e
11Ribosomal protein S26e
44Phosphoenolpyruvate carboxykinase
11Telomere recombination
11CAP-Gly domain
11Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
11DSBA-like thioredoxin domain
22Pyruvate phosphate dikinase, PEP/pyruvate binding domain
11Polypeptide deformylase
22Apocytochrome F, C-terminal
55OB-fold nucleic acid binding domain
55Kelch motif
66
11FYVE zinc finger
115'-3' exonuclease, C-terminal SAM fold
22Sec7 domain
55NAD dependent epimerase/dehydratase family
11Glycosyl hydrolase family 14
11Porphobilinogen deaminase, dipyromethane cofactor binding domain
44Phosphate transporter family
11Collagen triple helix repeat (20 copies)
11Topoisomerase DNA binding C4 zinc finger
55JAB1/Mov34/MPN/PAD-1 ubiquitin protease
88PCI domain
22tRNA synthetases class I (C) catalytic domain
11Oxidoreductase family, NAD-binding Rossmann fold
22tRNA synthetases class II core domain (F)
22Putative GTPase activating protein for Arf
22tRNA pseudouridine synthase
11NF-X1 type zinc finger
66LSM domain
11R3H domain
11Amidase
22AN1-like Zinc finger
11Hsp33 protein
22Peptidase family M3
22Peptidase family M1 domain
33Peptidase family M41
22Peptidase family M48
22NHL repeat
11Acetohydroxy acid isomeroreductase, catalytic domain
11Low molecular weight phosphotyrosine protein phosphatase
11Uncharacterized protein family (UPF0051)
22Eukaryotic porin
11GRIP domain
11Skp1 family, dimerisation domain
11Cytidylyltransferase-like
11Pyroglutamyl peptidase
44PUA domain
55LysM domain
55S4 domain
11PWI domain
22IBR domain, a half RING-finger domain
11Type I 3-dehydroquinase
11Shikimate / quinate 5-dehydrogenase
22Transmembrane amino acid transporter protein
11Frataxin-like domain
11GXGXG motif
22V-type ATPase 116kDa subunit family
11Phosphoribosyl-AMP cyclohydrolase
11Phosphoribosyl-ATP pyrophosphohydrolase
11TruB family pseudouridylate synthase (N terminal domain)
11Respiratory-chain NADH dehydrogenase 51 Kd subunit
33ATP-NAD kinase
11Phosphate acetyl/butaryl transferase
22DHHC palmitoyltransferase
11Glycosyl hydrolase family 47
55PPR repeat
11Adenosylmethionine decarboxylase
22CorA-like Mg2+ transporter protein
22Cation efflux family
66Peptidase family M20/M25/M40
11Bacterial extracellular solute-binding protein
88ShK domain-like
33Acyltransferase
33MatE
88DnaJ C terminal domain
11Fumarylacetoacetate (FAA) hydrolase family
22Spermine/spermidine synthase domain
22FAD binding domain
11Natural resistance-associated macrophage protein
33PAP2 superfamily
22G-patch domain
22Putative tRNA binding domain
11GAF domain
116-phosphofructo-2-kinase
55Flavin containing amine oxidoreductase
11Cyclin M transmembrane N-terminal domain
11O-methyltransferase
11Glycine cleavage H-protein
33
11Ribosomal protein S27a
44Adaptin N terminal region
113'-5' exonuclease
11Flavin reductase like domain
11Proline dehydrogenase
33Peptide methionine sulfoxide reductase
11Hpt domain
11Choline/ethanolamine kinase
11Phosphotransferase enzyme family
33SelR domain
11Conserved region in glutamate synthase
22Peptidase C13 family
11NAD-dependent DNA ligase adenylation domain
11Ribosomal protein L32
11Metalloenzyme superfamily
22Rhomboid family
11Sodium/calcium exchanger protein
11Queuine tRNA-ribosyltransferase
11UTP--glucose-1-phosphate uridylyltransferase
11Deoxynucleoside kinase
11Manganese-stabilising protein / photosystem II polypeptide
22BolA-like protein
44FtsJ-like methyltransferase
11Patatin-like phospholipase
11STAS domain
11Poly A polymerase head domain
11ATP-sulfurylase
11Importin beta binding domain
33Toprim domain
22MYND finger
11A20-like zinc finger
33Sodium Bile acid symporter family
113-dehydroquinate synthase
11Galactosyltransferase
11Lipase (class 3)
11Ribosome recycling factor
11Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
11Ribosomal L22e protein family
11Ribosomal L27e protein family
22Alternative oxidase
22PsbP
11[2Fe-2S] binding domain
11AICARFT/IMPCHase bienzyme
11Putative membrane protein insertion efficiency factor
115-formyltetrahydrofolate cyclo-ligase family
11ATP synthase subunit D
11Chorismate mutase type II
11WSC domain
11FG-GAP repeat
55ACT domain
11DIL domain
11NAC domain
22Proteasome/cyclosome repeat
11MOZ/SAS family
11Retinoblastoma-associated protein B domain
11Retinoblastoma-associated protein A domain
11AMMECR1
11RibD C-terminal domain
11Domain found in IF2B/IF5
11RNase P subunit p30
11Iron-sulfur cluster assembly protein
11RNA 2'-phosphotransferase, Tpt1 / KptA family
22Uncharacterised protein family UPF0047
11Diphthamide synthase
22Ribosomal protein L37e
11Nucleotidyltransferase domain
11eIF-6 family
11SRP19 protein
5550S ribosome-binding GTPase
11CYTH domain
11Ribosomal protein L14
11TRAM domain
11Integral membrane protein DUF92
22Thi4 family
11ArgJ family
11DJ-1/PfpI family
44HD domain
11MoaC family
11Hydantoinase/oxoprolinase
11Survival protein SurE
44Amidohydrolase family
11Peptidyl-tRNA hydrolase PTH2
11Double-stranded DNA-binding domain
11ATP synthase (E/31 kDa) subunit
11ATP synthase (C/AC39) subunit
11Translin family
11N2,N2-dimethylguanosine tRNA methyltransferase
11eIF4-gamma/eIF5/eIF2-epsilon
33SAP domain
77RWP-RK domain
11Aromatic-di-Alanine (AdAR) repeat
11TrkA-C domain
11Palmitoyl protein thioesterase
11Glycyl-tRNA synthetase alpha subunit
11Glycyl-tRNA synthetase beta subunit
2260Kd inner membrane protein
11Phosducin
11
11Nuclear transport factor 2 (NTF2) domain
11Beige/BEACH domain
22MGS-like domain
33Sir2 family
11RNA polymerases M/15 Kd subunit
11UvrB/uvrC motif
11Dihydroneopterin aldolase
11Prephenate dehydrogenase
33Peptidase family M50
11Cytochrome C1 family
11HAT (Half-A-TPR) repeat
11ParB-like nuclease domain
11Vacuolar sorting protein 9 (VPS9) domain
22Dynamin GTPase effector domain
11ML domain
11PA domain
11Phospholipase/Carboxylesterase
22NAD(P) transhydrogenase beta subunit
22TrkA-N domain
22Iron hydrogenase small subunit
22FAT domain
33FATC domain
33Guanylate-binding protein, N-terminal domain
11Ubiquinol-cytochrome C reductase complex 14kD subunit
11Signal recognition particle 14kD protein
11Cytochrome oxidase c subunit VIb
11HORMA domain
11B12 binding domain
33E2F/DP family winged-helix DNA-binding domain
11Ubiquinol-cytochrome C reductase hinge protein
33YGGT family
11Mitochondrial glycoprotein
33OTU-like cysteine protease
22Trehalose-phosphatase
11Cell division protein 48 (CDC48), N-terminal domain
11Cobalt transport protein
11B3 DNA binding domain
11Threonylcarbamoyl adenosine biosynthesis protein TsaE
55JmjC domain, hydroxylase
22Anion-transporting ATPase
22jmjN domain
22Putative methyltransferase
11MoaE protein
11LytB protein
22Seryl-tRNA synthetase N-terminal domain
11Permease MlaE
22Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat
11Flavoprotein
114-alpha-glucanotransferase
11Lecithin:cholesterol acyltransferase
22RecF/RecN/SMC N terminal domain
22Tim17/Tim22/Tim23/Pmp24 family
11Fasciclin domain
11MlaD protein
11Met-10+ like-protein
11Sigma 54 modulation protein / S30EA ribosomal protein
22
11CobW/HypB/UreG, nucleotide-binding domain
77MORN repeat
11Photosystem I reaction centre subunit III
11CobN/Magnesium Chelatase
22Oligosaccharyl transferase STT3 subunit
44CPBP intramembrane metalloprotease
1010Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
11rRNA small subunit methyltransferase G
22ZIP Zinc transporter
11Hydantoinase B/oxoprolinase
223-oxo-5-alpha-steroid 4-dehydrogenase
22Maf-like protein
11Homocysteine S-methyltransferase
11YbaB/EbfC DNA-binding family
11Predicted SPOUT methyltransferase
11ThiS family
11Uroporphyrinogen-III synthase HemD
11Photosystem I reaction centre subunit XI
11B12 binding domain
11ATP-dependent Clp protease adaptor protein ClpS
11CoA binding domain
11Putative S-adenosyl-L-methionine-dependent methyltransferase
11GatB domain
11Domain of unknown function (DUF202)
11Phosphatidylserine decarboxylase
111-deoxy-D-xylulose 5-phosphate reductoisomerase
11Paired amphipathic helix repeat
11CP12 domain
11Methyltransferase TYW3
11Pirin
11Divergent PAP2 family
11Cytochrome C biogenesis protein transmembrane region
11Uncharacterised BCR, YnfA/UPF0060 family
11Uncharacterized ACR, YdiU/UPF0061 family
11
11CDC45-like protein
11Copper amine oxidase, N2 domain
11Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
11SKIP/SNW domain
11Dak1 domain
11DAK2 domain
11Ku70/Ku80 beta-barrel domain
11Myosin N-terminal SH3-like domain
223-hydroxyacyl-CoA dehydrogenase, NAD binding domain
11Molybdopterin-binding domain of aldehyde dehydrogenase
115'-3' exonuclease, N-terminal resolvase-like domain
22Proliferating cell nuclear antigen, C-terminal domain
11AIR synthase related protein, C-terminal domain
22Acyl-CoA dehydrogenase, middle domain
22Acyl-CoA dehydrogenase, N-terminal domain
11Semialdehyde dehydrogenase, dimerisation domain
11Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
22Iron/manganese superoxide dismutases, C-terminal domain
55Transketolase, pyrimidine binding domain
33Transketolase, C-terminal domain
11Glucose-6-phosphate dehydrogenase, C-terminal domain
33Pyridoxal-dependent decarboxylase, pyridoxal binding domain
11Biotin carboxylase C-terminal domain
22Carbamoyl-phosphate synthase L chain, ATP binding domain
11Carbamoyl-phosphate synthetase large chain, oligomerisation domain
11Cytochrome C oxidase subunit II, transmembrane domain
11Mago nashi protein
33Glutathione S-transferase, N-terminal domain
22Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
11Beta-ketoacyl synthase, C-terminal domain
33Thiolase, C-terminal domain
33Ubiquitin interaction motif
22Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
11MIR domain
11Alpha-kinase family
22e3 binding domain
22TGS domain
33D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
11Glycosyl hydrolases family 2, TIM barrel domain
11
11Phosphoribosylglycinamide synthetase, C domain
11Phosphoribosylglycinamide synthetase, N domain
22CUE domain
11MA3 domain
33Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
33MIF4G domain
66Clp amino terminal domain, pathogenicity island component
44lactate/malate dehydrogenase, alpha/beta C-terminal domain
11Ribonucleotide reductase, barrel domain
115'-nucleotidase, C-terminal domain
33ATP synthase alpha/beta family, beta-barrel domain
22Mur ligase family, glutamate ligase domain
22Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
11Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
11Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
22SRP54-type protein, helical bundle domain
11Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
11Glycosyl transferase family, helical bundle domain
44Pyruvate kinase, alpha/beta domain
22Sec63 Brl domain
11Oxidoreductase family, C-terminal alpha/beta domain
22PEP-utilising enzyme, TIM barrel domain
22Prolyl oligopeptidase, N-terminal beta-propeller domain
22Ulp1 protease family, C-terminal catalytic domain
22Iron only hydrogenase large subunit, C-terminal domain
22Fumarate reductase flavoprotein C-term
11FAD linked oxidases, C-terminal domain
11Ubiquinol cytochrome reductase transmembrane region
88Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
11C5HC2 zinc finger
11
11GatB/GatE catalytic domain
11GAD domain
11Tim10/DDP family zinc finger
11Vitamin B12 dependent methionine synthase, activation domain
11Mitosis protein DIM1
11TATA box binding protein associated factor (TAF)
11Signal peptide binding domain
44Cyclin, C-terminal domain
11HEAT repeat
33Endomembrane protein 70
11Autophagy protein Atg8 ubiquitin like
11Prefoldin subunit
11Haemolysin-III related
33Glycerophosphoryl diester phosphodiesterase family
55Exostosin family
1010Dynein heavy chain region D6 P-loop domain
22Conserved hypothetical ATP binding protein
11Inorganic H+ pyrophosphatase
33NLI interacting factor-like phosphatase
11tRNA methyl transferase
11Retinal pigment epithelial membrane protein
22Thioesterase superfamily
11MBOAT, membrane-bound O-acyltransferase family
11Sugar efflux transporter for intercellular exchange
11CutA1 divalent ion tolerance protein
11BT1 family
33Biotin/lipoate A/B protein ligase family
22DNA polymerase family B, exonuclease domain
11SPX domain
11WRKY DNA -binding domain
55ABC1 family
1616SBP domain
11NAD-dependent DNA ligase OB-fold domain
55Anticodon binding domain
22PBS lyase HEAT-like repeat
66Tubulin-tyrosine ligase family
44Elongation factor Tu C-terminal domain
99Elongation factor Tu domain 2
11Ferredoxin-fold anticodon binding domain
22ALG6, ALG8 glycosyltransferase family
11XRN 5'-3' exonuclease N-terminus
11Uracil DNA glycosylase superfamily
11112OG-Fe(II) oxygenase superfamily
22CPSF A subunit region
11Eukaryotic cytochrome b561
11Protein of unknown function, DUF255
11RsgA GTPase
11LUC7 N_terminus
11Eukaryotic glutathione synthase
11Glycosyl hydrolase family 63 C-terminal domain
11
11TLC ATP/ADP transporter
11V-ATPase subunit H
22Yippee zinc-binding/DNA-binding /Mis18, centromere assembly
11Iron permease FTR1 family
11Photosystem I reaction centre subunit VI
11Rer1 family
11Anaphase-promoting complex, subunit 10 (APC10)
11Roadblock/LC7 domain
11NTPase
11S25 ribosomal protein
11Cornichon protein
11Oligosaccharyltransferase 48 kDa subunit beta
22Serine incorporator (Serinc)
44Snf7
22YEATS family
22PRP38 family
33Endonuclease/Exonuclease/phosphatase family
11CAS/CSE protein, C-terminus
11SAC3/GANP family
22Mo-co oxidoreductase dimerisation domain
11Fatty acid desaturase
33FAD binding domain of DNA photolyase
11NAD binding domain of 6-phosphogluconate dehydrogenase
11Homoserine dehydrogenase, NAD binding domain
11CO dehydrogenase flavoprotein C-terminal domain
11Nitrite/Sulfite reductase ferredoxin-like half domain
11MOSC domain
11MOSC N-terminal beta barrel domain
11ATP cone domain
11Putative GTP-binding controlling metal-binding
11Saposin-like type B, region 2
11Structure-specific recognition protein (SSRP1)
11Cullin binding
22Peptidase family S41
22
11Citrate transporter
11DNA directed RNA polymerase, 7 kDa subunit
11Kinase/pyrophosphorylase
33Organic solute transporter Ostalpha
11Fumble
11Mob1/phocein family
22Possible lysine decarboxylase
11Vacuolar protein sorting-associated protein 26
11Glycosyl hydrolase family 85
11Uncharacterised protein family (UPF0014)
11Mitochondrial pyruvate carriers
11
11Pam16
11UPF0113 PUA domain
11Uncharacterised protein family (UPF0172)
11Ubiquitin fold modifier 1 protein
11Uncharacterised protein family (UPF0160)
11UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
11UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
11Hexokinase
11Integral membrane protein TerC family
11ADP-ribosylglycohydrolase
11Vitelline membrane outer layer protein I (VOMI)
22Elongation factor G, domain IV
33CRAL/TRIO, N-terminal domain
11
11TLC domain
11Nuf2 family
11Scramblase
66Importin-beta N-terminal domain
11MazG nucleotide pyrophosphohydrolase domain
11Cid1 family poly A polymerase
11Binding domain of DNA repair protein Ercc1 (rad10/Swi10)
11Transcription initiation factor TFIID subunit A
11UV-endonuclease UvdE
11RNA polymerase Rpb8
22SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397
11Fructosamine kinase
11
11BSD domain
11Sec61beta family
11Eukaryotic glutathione synthase, ATP binding domain
22Skp1 family, tetramerisation domain
11Flavinator of succinate dehydrogenase
11Ribosomal protein L23, N-terminal domain
22Ribosomal protein L11, N-terminal domain
11Ribosomal Proteins L2, C-terminal domain
11Ribosomal protein L9, C-terminal domain
22Malic enzyme, NAD binding domain
22tRNA synthetases class I (E and Q), anti-codon binding domain
22Glutamine synthetase, beta-Grasp domain
11Enolase, N-terminal domain
77Tubulin C-terminal domain
11Mnd1 HTH domain
11Chorion family 2
11Trm112p-like protein
11AFG1-like ATPase
11Diacylglycerol acyltransferase
11Copper binding octapeptide repeat
11VPS28 protein
11Dip2/Utp12 Family
11PspA/IM30 family
11Ribosome biogenesis protein, C-terminal
11Domain of unknown function (DUF382)
11PSP
11
22Transport protein particle (TRAPP) component
11Coatomer WD associated region
1212Radical SAM superfamily
11Ssl1-like
11ORMDL family
11ARP2/3 complex ARPC3 (21 kDa) subunit
11Possible Fer4-like domain in RNase L inhibitor, RLI
11Leucine carboxyl methyltransferase
11Per1-like family
44Partial alpha/beta-hydrolase lipase region
11Origin recognition complex subunit 2
11Signal recognition particle, alpha subunit, N-terminal
11Nucleoporin autopeptidase
11Sybindin-like family
22Glycosyltransferase family 28 C-terminal domain
11Eukaryotic and archaeal DNA primase, large subunit
11Apg6 BARA domain
11Fatty acid hydroxylase superfamily
22Mpv17 / PMP22 family
11Vps52 / Sac2 family
11Gamma tubulin complex component C-terminal
11Isoprenylcysteine carboxyl methyltransferase (ICMT) family
11SCAMP family
11Ctr copper transporter family
11YT521-B-like domain
11Mre11 DNA-binding presumed domain
11Sof1-like domain
11Rit1 DUSP-like domain
11Gcd10p family
11Utp21 specific WD40 associated putative domain
11PQ loop repeat
11Programmed cell death protein 2, C-terminal putative domain
11MIT (microtubule interacting and transport) domain
11Stage V sporulation protein S (SpoVS)
11Protein of unknown function (DUF423)
11Signal peptide peptidase
11Las17-binding protein actin regulator
22Protein tyrosine phosphatase-like protein, PTPLA
77Helicase associated domain (HA2)
11Gar1/Naf1 RNA binding region
44Brix domain
11Cytochrome c oxidase assembly protein CtaG/Cox11
11tRNAHis guanylyltransferase
11RNA methyltransferase
11RTA1 like protein
11Endonuclease V
11Viral A-type inclusion protein repeat
22Der1-like family
11TPM domain
11
11GcpE protein
11Extensin-like region
11Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2
11Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1
22RNA polymerase Rpb2, domain 7
11RNA polymerase Rpb2, domain 2
11RNA polymerase beta subunit
77U-box domain
11RNA polymerase Rpb2, domain 3
11RNA polymerase Rpb2, domain 4
11RNA polymerase Rpb2, domain 5
22Region found in RelA / SpoT proteins
11Mitochondrial ATP synthase epsilon chain
11
11PLATZ transcription factor
11Rtf2 RING-finger
11Vta1 like
11
11DNA ligase N terminus
11Protein similar to CwfJ C-terminus 2
11Protein similar to CwfJ C-terminus 1
11ATP dependent DNA ligase C terminal region
11Radial spokehead-like protein
11Anthranilate synthase component I, N terminal region
11Ssu72-like protein
11ASF1 like histone chaperone
11Neutral/alkaline non-lysosomal ceramidase, N-terminal
11ChaC-like protein
33PAP_fibrillin
11Ribosomal protein S30
11Erv1 / Alr family
11Protein of unknown function, DUF547
11LMBR1-like membrane protein
11ETC complex I subunit conserved region
22Sec23/Sec24 zinc finger
22Sec23/Sec24 trunk domain
22Sec23/Sec24 helical domain
33SOUL heme-binding protein
11Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65)
22Type III restriction enzyme, res subunit
11CAF1 family ribonuclease
11Vitamin B6 photo-protection and homoeostasis
11
11Glutamate synthase central domain
11XAP5, circadian clock regulator
11Poly(A) polymerase central domain
11Ribosome biogenesis regulatory protein (RRS1)
2240S ribosome biogenesis protein Tsr1 and BMS1 C-terminal
11CS domain
11NMD3 family
22HPP family
22RNA polymerase Rpb1, domain 3
11RNA polymerase Rpb1, domain 7
11RNA polymerase Rpb1, domain 6
22RNA polymerase Rpb1, domain 1
22RNA polymerase Rpb1, domain 5
33RNA polymerase Rpb1, domain 4
11RNA polymerase Rpb1 C-terminal repeat
11SGS domain
11Janus/Ocnus family (Ocnus)
11Mannosyltransferase (PIG-M)
11Vesicle transport v-SNARE protein N-terminus
11Coenzyme Q (ubiquinone) biosynthesis protein Coq4
11NPL4 family
22Phytochelatin synthase
11
22Caleosin related protein
11Cytochrome C oxidase copper chaperone (COX17)
11Putative serine esterase (DUF676)
22MT-A70
11Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
11Transcription elongation factor Elf1 like
11ResB-like family
11
11Hypothetical methyltransferase
11RNA polymerase Rpc34 subunit
11Nup53/35/40-type RNA recognition motif
22DNL zinc finger
11Saposin-like type B, region 1
11PRMT5 arginine-N-methyltransferase
11Dpy-30 motif
11RNA 3'-terminal phosphate cyclase (RTC), insert domain
33Peptidase M16 inactive domain
11Aminopeptidase P, N-terminal domain
11
11Glutamyl-tRNAGlu reductase, N-terminal domain
11UNC-50 family
11S-adenosyl-L-homocysteine hydrolase
22Alanine dehydrogenase/PNT, N-terminal domain
11
11Oligosaccharyltransferase subunit 5
11AAR2 protein
22Complex 1 protein (LYR family)
11Proteasome maturation factor UMP1
11Hydantoinase/oxoprolinase N-terminal region
11La domain
11GUN4-like
22
11Eukaryotic translation initiation factor 3 subunit 8 N-terminus
22CHY zinc finger
4444Gametolysin peptidase M11
22Serine carboxypeptidase S28
11CDK5 regulatory subunit-associated protein 3
11SRP-independent targeting protein 2/TMEM208
22Sugar-tranasporters, 12 TM
11Peroxisomal biogenesis factor 11 (PEX11)
22Magnesium transporter NIPA
11SOH1
22NFACT protein RNA binding domain
11Fumarate hydratase (Fumerase)
11Fumarase C-terminus
1156kDa selenium binding protein (SBP56)
11MRG
11Phytanoyl-CoA dioxygenase (PhyH)
11Pirin C-terminal cupin domain
11TROVE domain
22SNARE domain
11DALR anticodon binding domain
11Oxygen evolving enhancer protein 3 (PsbQ)
225' nucleotidase family
22RWD domain
11Kinesin-associated protein (KAP)
11Eukaryotic protein of unknown function (DUF846)
11Fibronectin-binding protein A N-terminus (FbpA)
11Lycopene cyclase protein
11Suppressor of forked protein (Suf)
11ARP2/3 complex 20 kDa subunit (ARPC4)
11Root hair defective 3 GTP-binding protein (RHD3)
11O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS
11AdoMet dependent proline di-methyltransferase
22PPPDE putative peptidase domain
11GINS complex protein
11tRNA (Uracil-5-)-methyltransferase
11F/Y-rich N-terminus
11F/Y rich C-terminus
11MED7 protein
11Ferredoxin-dependent bilin reductase
11
11Dcp1-like decapping family
22TIP49 P-loop domain
22Protein of unknown function (DUF933)
11Protein of unknown function (DUF962)
11Protein of unknown function (DUF971)
11CCT motif
11GRIM-19 protein
11U1 zinc finger
11Isy1-like splicing family
11
11CH-like domain in sperm protein
11Transcription factor TFIIH complex subunit Tfb5
11BPG-independent PGAM N-terminus (iPGM_N)
11CTP synthase N-terminus
11Conserved oligomeric complex COG6
11GTP-binding protein LepA C-terminus
11PRP1 splicing factor, N-terminal
11
11Serine acetyltransferase, N-terminal
11Protein of unknown function (DUF1084)
11Molybdenum Cofactor Synthesis C
22SMC proteins Flexible Hinge Domain
22FtsH Extracellular
11RNA-binding protein Tab2/Atab2
11Sin3 associated polypeptide p18 (SAP18)
11DUF1126 PH-like domain
11Microsomal signal peptidase 12 kDa subunit (SPC12)
11SF-assemblin/beta giardin
11Pescadillo N-terminus
22DEAD_2
11CHCH domain
11Helical and beta-bridge domain
11Pre-mRNA cleavage complex II protein Clp1
11Lung seven transmembrane receptor
22Formamidopyrimidine-DNA glycosylase H2TH domain
11Methionine gamma-lyase
22GRF zinc finger
11Protein of unknown function (DUF1242)
11Nucleolar GTP-binding protein 1 (NOG1)
11Putative Phosphatase
11Protein of unknown function (DUF1279)
11Monogalactosyldiacylglycerol (MGDG) synthase
11
11LSD1 zinc finger
11Coatomer (COPI) alpha subunit C-terminus
22Protein of unknown function (DUF1295)
11Biotin and Thiamin Synthesis associated domain
11HemN C-terminal domain
22Copine
11Sperm-tail PG-rich repeat
11Protein of unknown function (DUF1336)
11
11Protein of unknown function (DUF1350)
11DRTGG domain
11Ciliary basal body-associated, B9 protein
11Splicing factor 3B subunit 10 (SF3b10)
11Stage II sporulation protein E (SpoIIE)
11Bardet-Biedl syndrome 5 protein
11NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
11Transcription factor S-II (TFIIS), central domain
11SecA Wing and Scaffold domain
11SecA DEAD-like domain
33Zn-dependent metallo-hydrolase RNA specificity domain
11Bromodomain associated
22TLD
11TUP1-like enhancer of split
11TAF6 C-terminal HEAT repeat domain
66Kelch motif
22SAM domain (Sterile alpha motif)
22Kazal-type serine protease inhibitor domain
22EGF-like domain
22Pyridine nucleotide-disulphide oxidoreductase
11RAP domain
11PAS fold
11Sep15/SelM redox domain
11Elongation factor P, C-terminal