PFAM Domains • Cylindrocarpon olidum MPI-CAGE-CH-0241 v1.0
Annotations/GenomesCylol1Daces1Ilyeu1Ilyrob1Ilysp1MarPMI226Neodi1TotalAnnotation Description
PFAMs
15,09817,16918,23117,37915,04711,55412,735107,213
227 transmembrane receptor (rhodopsin family)
454532237 transmembrane receptor (Secretin family)
66667372725054453ATPase family associated with various cellular activities (AAA)
76989584875461555ABC transporter
746546436ATP synthase alpha/beta family, nucleotide-binding domain
11EGF-like domain
15151515141515104Elongation factor Tu GTP binding domain
22172327161612133Helix-loop-helix DNA-binding domain
765665237Hsp20/alpha crystallin family
2020171791614113Hsp70 protein
787798854KH domain
11Kunitz/Bovine pancreatic trypsin inhibitor domain
11SH2 domain
12121315271213104SH3 domain
1110111111101074Actin
547893962503533639Ankyrin repeat
8997125757PAN domain
988888857ADP-ribosylation factor family
22202325181419141Eukaryotic aspartyl protease
465854436Cyclic nucleotide-binding domain
1113Beta/Gamma crystallin
11111117Cytochrome c
213Double-stranded RNA binding motif
2222202131EF hand
1124Fe-4S binding domain
1111217Fibronectin type III domain
332234219Globin
14222122271216134Glutathione S-transferase, C-terminal domain
11111117Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
5566125544Homeodomain
11Laminin N-terminal (Domain VI)
344344224lactate/malate dehydrogenase, NAD binding domain
11Lipocalin / cytosolic fatty-acid binding protein family
865554538Myosin head (motor domain)
131179200171187821101,060Cytochrome P450
1912012072131801311741,297Protein kinase domain
22242727351918172Pyridine nucleotide-disulphide oxidoreductase
32523336302625234Ras family
17241818191415125Response regulator receiver domain
3869232455RNase H
55515555624951378RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
29635Reverse transcriptase (RNA-dependent DNA polymerase)
1113Serpin (serine protease inhibitor)
333323320Copper/zinc superoxide dismutase (SODC)
332122215Iron/manganese superoxide dismutases, alpha-hairpin domain
35355450391630259Subtilase family
1802222372332291111431,355Sugar (and other) transporter
1213141414131292Thioredoxin
1113Thyroglobulin type-1 repeat
234312Trypsin
748565439Tubulin/FtsZ family, GTPase domain
21811von Willebrand factor type A domain
314350391273222344Zinc finger, C2H2 type
7674615494Zinc finger, C3HC4 type (RING finger)
56141831451Zinc knuckle
223222215Protein-tyrosine phosphatase
2042613112903681141741,722short chain dehydrogenase
1021551631451836785900Zinc-binding dehydrogenase
578785646Thiolase, N-terminal domain
25212520262018155Beta-ketoacyl synthase, N-terminal domain
4344642272Fe-2S iron-sulfur cluster binding domain
11111117Enolase, C-terminal TIM barrel domain
11Cytochrome C and Quinol oxidase polypeptide I
15131916141112100Glutamine amidotransferase class-I
1010101010101171TCP-1/cpn60 chaperonin family
889793549Glutamine synthetase, catalytic domain
222222214Triosephosphate isomerase
27313135282625203E1-E2 ATPase
131110101210975Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
131087812765Alpha amylase, catalytic domain
222232215Phorbol esters/diacylglycerol binding domain (C1 domain)
77109117859Bacterial transferase hexapeptide (six repeats)
667645539tRNA synthetases class I (I, L, M and V)
811169119872Cyclin, N-terminal domain
3853586263732313Carboxylesterase family
444444428DNA polymerase family B
576665540ATP synthase subunit C
965753742Peroxidase
28294237411524216Beta-lactamase
222222214C-5 cytosine-specific DNA methylase
26272425322627187Calcineurin-like phosphoesterase
1719191915817114Cellulase (glycosyl hydrolase family 5)
878797753tRNA synthetases class II (D, K and N)
45474848484240318Mitochondrial carrier protein
29374541402429245Aminotransferase class I and II
3455115639Phosphoribosyl transferase domain
1011111011101073Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
11111117Phosphoglycerate kinase
222222214Ribosomal protein S4/S9 N-terminal domain
222222214Ribosomal protein S12/S23
11114Bacterial regulatory helix-turn-helix proteins, AraC family
11111117Chaperonin 10 Kd subunit
1311121216101185C2 domain
810991981073PH domain
36363332313615219bZIP transcription factor
46758268783941429Aldehyde dehydrogenase family
5536907616407563592984,057Fungal Zn(2)-Cys(6) binuclear cluster domain
36414136412530250Cytochrome b5-like Heme/Steroid binding domain
454343225Oxidoreductase molybdopterin binding domain
26303129351819188Oxidoreductase NAD-binding domain
32293938362827229SNF2 family N-terminal domain
222222214Ribosomal protein S7p/S5e
22212122232119149Ubiquitin-conjugating enzyme
91091087962Isocitrate/isopropylmalate dehydrogenase
222222113Ribosomal Proteins L2, RNA binding domain
11111117Hsp90 protein
222222214Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
11111128Dihydrofolate reductase
7107764647Chitin recognition protein
655665740Cysteine-rich secretory protein family
11111117Ribosomal protein S3, C-terminal domain
1066753542Cupin
333333321Annexin
223431217Eukaryotic-type carbonic anhydrase
122321112Chalcone and stilbene synthases, N-terminal domain
5555654352-oxoacid dehydrogenases acyltransferase (catalytic domain)
76108114551Catalase
113241113Disintegrin
1614171756984UDP-glucoronosyl and UDP-glucosyl transferase
19202124221315134Aminotransferase class-III
222222214Ribosomal protein S19
12111129DNA gyrase B
9111515146575Thiamine pyrophosphate enzyme, central domain
576963541Lyase
232222215Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
222219Sodium:neurotransmitter symporter family
1113Ferritin-like domain
11111117Adenylate and Guanylate cyclase catalytic domain
412211112ATP synthase delta (OSCP) subunit
122221212Orotidine 5'-phosphate decarboxylase / HUMPS family
11111117Indole-3-glycerol phosphate synthase
122221111Aromatic amino acid lyase
11111117Pyruvate kinase, barrel domain
1213121212121487Kinesin motor domain
28282626272628189DnaJ domain
1414141414141498Proteasome subunit
965456439Major intrinsic protein
11111117ATP synthase
889892448Glycosyl hydrolase family 1
111111173'5'-cyclic nucleotide phosphodiesterase
11111117Profilin
222212213Ribosomal protein L22p/L17e
222222214Ribosomal protein L14p/L23e
1312121116121086Ubiquitin family
656656539Cofilin/tropomyosin-type actin-binding protein
686145534714-3-3 protein
222232215Alkaline phosphatase
61010982752Zinc carboxypeptidase
53586763653343382Aldo/keto reductase family
91177177664Myb-like DNA-binding domain
667463436Forkhead domain
565562332Glycosyl hydrolases family 32 N-terminal domain
222212112Ribosomal protein L16p/L10e
222222214Ribosomal protein S14p/S29e
344443325FKBP-type peptidyl-prolyl cis-trans isomerase
11111117Glutathione peroxidase
11
121617161791097Flavodoxin
11111117Calreticulin family
121620181831198Common central domain of tyrosinase
1010131411101078Aminotransferase class-V
11111117Ribonucleotide reductase, small chain
48485153494345337DEAD/DEAH box helicase
81839390987476595Helicase conserved C-terminal domain
11111128EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222222214Ribosomal protein L23
11111117Pyridoxal-dependent decarboxylase, C-terminal sheet domain
11112129Ribosomal protein L5
797776851Pyridoxal-dependent decarboxylase conserved domain
444444428Citrate synthase, C-terminal domain
457665538GHMP kinases N terminal domain
899888858Biotin carboxylase, N-terminal domain
11111117Tryptophan synthase alpha chain
15151716161415108Pyridoxal-phosphate dependent enzyme
20202321261718145NUDIX domain
566685743pfkB family carbohydrate kinase
141716171611293Glycosyl hydrolases family 28
8977151249Luciferase-like monooxygenase
222222214Ribosomal protein L3
222222214Ribosomal protein L11, RNA binding domain
16171718171216113Histidine phosphatase superfamily (branch 1)
11111117Thymidylate synthase
433211216Lipoxygenase
746545435ATP synthase alpha/beta chain, C terminal domain
555555434Calponin homology (CH) domain
123253319Glutamine amidotransferases class-II
222222214Ribosomal protein S15
122231112Thaumatin family
222222214Fructose-1-6-bisphosphatase, N-terminal domain
11111117Ribonucleotide reductase, all-alpha domain
222222214Ribosomal protein S2
222222214SRF-type transcription factor (DNA-binding and dimerisation domain)
81810886765GATA zinc finger
375756481183336385Amino acid permease
810111155757Prolyl oligopeptidase family
222222214Ribosomal protein L30p/L7e
11101010116967Histidine phosphatase superfamily (branch 2)
11111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
758884646Aconitase family (aconitate hydratase)
84787337Glycosyl hydrolase family 10
233341319Glycosyl hydrolases family 17
222222214Ribosomal protein S5, N-terminal domain
11111117Nucleoside diphosphate kinase
211116Tetraspanin family
222212213Ribosomal protein S10p/S20e
585744639Arrestin (or S-antigen), N-terminal domain
11111117Phosphoglucose isomerase
11111117Carbohydrate phosphorylase
11111117SecY translocase
11111117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222214Ribosomal protein L6
335443426Polyprenyl synthetase
655556537Hexokinase
18181918141713117Dynamin family
11111117Transcription factor TFIID (or TATA-binding protein, TBP)
10101210146870Rieske [2Fe-2S] domain
1111116Phytochrome region
11Proton-conducting membrane transporter
1212131214121085Biotin-requiring enzyme
11111117Phosphofructokinase
222222214Ribosomal protein S17
214321215Hydroxymethylglutaryl-coenzyme A reductase
444444327FGGY family of carbohydrate kinases, N-terminal domain
111115Sodium:dicarboxylate symporter family
23363331322018193Enoyl-CoA hydratase/isomerase
222222214Ribosomal protein S9/S16
222222214Transcription factor TFIIB repeat
987677650Cytidine and deoxycytidylate deaminase zinc-binding region
11111117Molybdopterin oxidoreductase
12202015241313117Chromo (CHRromatin Organisation MOdifier) domain
644464432Phosphatidylinositol-specific phospholipase C, Y domain
878796752Phosphatidylinositol-specific phospholipase C, X domain
1318181821913110D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
222222214Malic enzyme, N-terminal domain
1111116PEP-utilising enzyme, mobile domain
211111186-phosphogluconate dehydrogenase, C-terminal domain
131718151710898Multicopper oxidase
1211121416111187WW domain
222212213Ribosomal RNA adenine dimethylase
11114Yeast PIR protein repeat
146137128134139109108901WD domain, G-beta repeat
6681195550Heavy-metal-associated domain
445543429Adenylate kinase
222212213Phosphoglucomutase/phosphomannomutase, C-terminal domain
222212213Ribosomal protein S8
222212213Ribosomal protein S11
444444428LIM domain
4332315Matrixin
444425427Regulator of chromosome condensation (RCC1) repeat
222222214Ribosomal protein S13/S18
222222315chorismate binding enzyme
33433332260s Acidic ribosomal protein
554444329Prenyltransferase and squalene oxidase repeat
445575535Protein kinase C terminal domain
11111117Single-strand binding protein family
11111117S-adenosylmethionine synthetase, N-terminal domain
10121011119972Bromodomain
1620202022915122Acyl-CoA dehydrogenase, C-terminal domain
1313131314131392Ubiquitin carboxyl-terminal hydrolase
1111116Ribosomal protein L36
11111117Ribonuclease T2 family
535344327HSF-type DNA-binding
222223316SRP54-type protein, GTPase domain
11111117Urease alpha-subunit, N-terminal domain
1615191717610100Serine carboxypeptidase
889888857Phosphatidylinositol 3- and 4-kinase
443462326Transketolase, thiamine diphosphate binding domain
532221217Glycosyl hydrolases family 11
567775542Inositol monophosphatase family
444444428Glutaredoxin
3454102331Isocitrate lyase family
333333321Serine hydroxymethyltransferase
5116666545Iron-containing alcohol dehydrogenase
222222214Ribosomal protein L10
222222214KOW motif
11111117Ribosomal protein L34
112Ribosomal protein L33
333333321RF-1 domain
6107784850Sodium:solute symporter family
11111117Imidazoleglycerol-phosphate dehydratase
11111117DNA polymerase family A
11111117IMP dehydrogenase / GMP reductase domain
11111117Glucose-6-phosphate dehydrogenase, NAD binding domain
677766746Protein phosphatase 2C
322222215Nucleotidyl transferase
7109854447Carbonic anhydrase
323212215Phosphoribulokinase / Uridine kinase family
81210889964Fatty acid desaturase
666666642MutS domain V
11111117Delta-aminolevulinic acid dehydratase
769875749Arginase family
666666642MCM P-loop domain
323322217Squalene/phytoene synthase
1113Bacterial extracellular solute-binding proteins, family 3
101213131591284FHA domain
7280106961075461576AMP-binding enzyme
345553328G-protein alpha subunit
1097889960HMG (high mobility group) box
1218141416121197His Kinase A (phospho-acceptor) domain
222232215Armadillo/beta-catenin-like repeat
17191914391716141Tetratricopeptide repeat
433343323Ion transport protein
12111118DNA gyrase/topoisomerase IV, subunit A
7978149761BRCA1 C Terminus (BRCT) domain
8111011115864Glycosyl transferases group 1
222252217Glycosyl transferase family 2
222222113SAM domain (Sterile alpha motif)
11111117linker histone H1 and H5 family
11111117Ribosomal protein L7/L12 C-terminal domain
9141915181287Pectate lyase
213321113ribonuclease
11111117Urease, gamma subunit
555555434CoA-ligase
36334536412931251Phosphopantetheine attachment site
445557333Formyl transferase
101211119131076Metallopeptidase family M24
322314125Leucine Rich Repeat
10132218981110182alpha/beta hydrolase fold
333333321RNA polymerase Rpb2, domain 6
444444428PB1 domain
222222214Staphylococcal nuclease homologue
1215121210121285Rab-GTPase-TBC domain
11111117Tudor domain
11111117WH1 domain
454454430Zinc finger, ZZ type
21111219HRDC domain
976787650CBS domain
222222214Ribosomal protein L13
222222214Ribosomal protein L4/L1 family
11111117Clp protease
354445530S1 RNA binding domain
11111117HIUase/Transthyretin family
335446429AhpC/TSA family
444444428tRNA synthetases class I (W and Y)
11111128UvrD/REP helicase N-terminal domain
191315156141092Rhodanese-like domain
222222214Universal stress protein family
38515150683642336Acetyltransferase (GNAT) family
11111117SecE/Sec61-gamma subunits of protein translocation complex
11111117C-terminal regulatory domain of Threonine dehydratase
222222214AIR synthase related protein, N-terminal domain
7798108857tRNA synthetase class II core domain (G, H, P, S and T)
11111117SpoU rRNA Methylase family
232222215Tetrapyrrole (Corrin/Porphyrin) Methylases
11111117Glycosyl transferase family, a/b domain
11PDZ domain
91218142151190Class II Aldolase and Adducin N-terminal domain
789375645Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
555555535Fes/CIP4, and EFC/F-BAR homology domain
222242216IQ calmodulin-binding motif
222222214Phosphoinositide 3-kinase family, accessory domain (PIK domain)
333363324Phospholipase D Active site motif
14161611411779Regulator of G protein signaling domain
344444427GTPase-activator protein for Ras-like GTPase
455654433RasGEF domain
455454431RasGEF N-terminal motif
997888857RhoGAP domain
686677646RhoGEF domain
358643332SPRY domain
334443324RNA polymerase Rpb1, domain 2
223332217Guanylate kinase
444444428Gelsolin repeat
545595538UBA/TS-N domain
1113121116111286PHD-finger
11112118GGL domain
666666541HECT-domain (ubiquitin-transferase)
11111117Helix-hairpin-helix motif
11111117MSP (Major sperm protein) domain
533344325Ribonuclease III domain
444434427Region in Clathrin and VPS
232332318RanBP1 domain
11112118PPIC-type PPIASE domain
322332116Zn-finger in Ran binding protein and others
9101312197878Zinc finger C-x8-C-x5-C-x3-H type (and similar)
322433219Poly(ADP-ribose) polymerase catalytic domain
11111117Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
232022201102216233F-box domain
11111117Elongation factor 1 gamma, conserved domain
59108117555Calpain family cysteine protease
233232217Copper fist DNA binding domain
676666643CRAL/TRIO domain
22172016181218123BTB/POZ domain
11111117Inhibitor of Apoptosis domain
443434325Voltage gated chloride channel
71010993452Caspase domain
1310641331059GDSL-like Lipase/Acylhydrolase
12111118Poly-adenylate binding protein, unique domain
1111116POLO box duplicated region
34463836342830246ABC transporter transmembrane region
10212Integrase core domain
131916151681097FAD binding domain
15171816191315113Condensation domain
11111117S-adenosyl-L-homocysteine hydrolase, NAD binding domain
131221111HAMP domain
222222214ribosomal L5P family C-terminus
788786549Insulinase (Peptidase family M16)
555664435Dehydrogenase E1 component
11111117Lumazine binding domain
666666642Elongation factor G C-terminus
787775748HMGL-like
444444428DnaJ central domain
11Sulfotransferase domain
333331117Starch binding domain
333323320Ribosomal protein L1p/L10e family
15171817171512111Cation transporting ATPase, C-terminus
15141514191513105Cation transporter/ATPase, N-terminus
11111117dUTPase
756794644Aconitase C-terminal domain
334443425Amino acid kinase family
11111117N-(5'phosphoribosyl)anthranilate (PRA) isomerase
24202419242018149Acyl transferase domain
11111117Urease beta subunit
16151918191113111Dihydrodipicolinate synthetase family
23282729482319197haloacid dehalogenase-like hydrolase
59712861057Glycosyl hydrolases family 2
27403130281820194Glycosyl hydrolases family 18
11111117Proliferating cell nuclear antigen, N-terminal domain
1111116Translation initiation factor IF-3, C-terminal domain
111115Acylphosphatase
522321217Adenylosuccinate synthetase
88148154562Asparaginase, N-terminal
333233219Peptidase S24-like
222221213Inorganic pyrophosphatase
27353531242225199Glycosyl hydrolases family 16
353332221Glycosyl hydrolases family 15
2327232230821154NADH:flavin oxidoreductase / NADH oxidase family
3222333183-hydroxyacyl-CoA dehydrogenase, C-terminal domain
323221215Glycosyl hydrolase family 20, catalytic domain
565546536HhH-GPD superfamily base excision DNA repair protein
11111117AIR carboxylase
30414445351227234GMC oxidoreductase
323333320Asparagine synthase
1920161514513102Fungal cellulose binding domain
667666744Septin
11111117EF-1 guanine nucleotide exchange domain
11311119Homoserine dehydrogenase
151914167131599Flavin-binding monooxygenase-like
333334322tRNA synthetases class I (E and Q), catalytic domain
334544225tRNA synthetases class I (R)
444444428XPG N-terminal domain
1428332342910159Metallo-beta-lactamase superfamily
12137F5/8 type C domain
222224317Choline/Carnitine o-acyltransferase
244412320Putative esterase
11111117Ferrochelatase
322222316Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
222121212Arginosuccinate synthase
11111117Electron transfer flavoprotein FAD-binding domain
333333321RNB domain
9161712167885Dioxygenase
343323321CNH domain
232212214Diacylglycerol kinase catalytic domain
889998859Dual specificity phosphatase, catalytic domain
322332318P21-Rho-binding domain
1313131312131390PX domain
232232216Ras association (RalGDS/AF-6) domain
434454327UBX domain
655546435VHS domain
11111117Phosphoinositide 3-kinase C2
222222315DAHP synthetase I family
15202524251319141Carbon-nitrogen hydrolase
555553432N-acetyltransferase
11111117Prephenate dehydratase
444454328Syntaxin
112Pentapeptide repeats (8 copies)
444454429Pumilio-family RNA binding repeat
777767748Histone-like transcription factor (CBF/NF-Y) and archaeal histone
11111117Pterin binding enzyme
222222214ER lumen protein retaining receptor
222222214Glycoprotease family
223242217Histidinol dehydrogenase
444444428impB/mucB/samB family
11
11111117Ribosomal L15
333313319Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
11111117Ribosomal L28 family
11111117Ribosomal L29 protein
1111116Ribosomal L39 protein
11111117Ribosomal S17
11111117Ribulose-phosphate 3 epimerase family
11111117Translationally controlled tumour protein
343331320Glycosyl hydrolase family 7
681084440Ring hydroxylating alpha subunit (catalytic domain)
11111117RNA pseudouridylate synthase
444444428Histone deacetylase domain
544442326POT family
11111117PWWP domain
19152521201819137SET domain
8914