PFAM Domains • Eurotium rubrum v1.0
Annotations/GenomesAspcl1Aspfl1Aspfu1Aspni5Aspnid1Aspor1Aspte1Eurhe1Neofi1Pench1TotalAnnotation Description
PFAMs
7,97710,2268,4527,8769,0749,7369,0728,2128,8189,14088,583
38454038424343404040409ATPase family associated with various cellular activities (AAA)
55755262498258486054595ABC transporter
444454544442ATP synthase alpha/beta family, nucleotide-binding domain
11114EGF-like domain
14161414131614141414143Elongation factor Tu GTP binding domain
9129913101091010101Helix-loop-helix DNA-binding domain
233353223531Hsp20/alpha crystallin family
777787777771Hsp70 protein
787787787874KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
111111111110SH2 domain
24232324232122222223227SH3 domain
101110710111010101099Actin
4610463765910590519059743Ankyrin repeat
1514121116PAN domain
797778877875ADP-ribosylation factor family
9137111013868893Eukaryotic aspartyl protease
444544444441Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
11Cytochrome b/b6/petB
1111111119Cytochrome c
132323122221Double-stranded RNA binding motif
17202021181920172116189EF hand
2222122221184Fe-4S binding domain
222331124222Fibronectin type III domain
222222211319Globin
12181412121816131914148Glutathione S-transferase, C-terminal domain
433223213124Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
1113Hemopexin
776677777768Homeodomain
333442332431lactate/malate dehydrogenase, NAD binding domain
1214Low-density lipoprotein receptor repeat class B
11Lipocalin / cytosolic fatty-acid binding protein family
555455555448Myosin head (motor domain)
901487213211414911577911041,092Cytochrome P450
118116110122104115121951161451,162Protein kinase domain
13171615191920161515165Pyridine nucleotide-disulphide oxidoreductase
23242222232424232323231Ras family
18191613191515171717166Response regulator receiver domain
24183105213553RNase H
64566363656161646465626RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
2222071153Reverse transcriptase (RNA-dependent DNA polymerase)
122322222321Copper/zinc superoxide dismutase (SODC)
222221222219Iron/manganese superoxide dismutases, alpha-hairpin domain
475434656549Subtilase family
6011783152106115115611011121,022Sugar (and other) transporter
916121191511101211116Thioredoxin
241122211117Trypsin
565476545451Tubulin/FtsZ family, GTPase domain
213121123420von Willebrand factor type A domain
54545665624065656175597Zinc finger, C2H2 type
41294031393333423839365Zinc finger, C3HC4 type (RING finger)
69719106129877Zinc knuckle
232323222223Protein-tyrosine phosphatase
971631101411411501291141191171,281short chain dehydrogenase
6110354118739980786979814Zinc-binding dehydrogenase
666776776664Thiolase, N-terminal domain
25401950373633142125300Beta-ketoacyl synthase, N-terminal domain
4435545545442Fe-2S iron-sulfur cluster binding domain
111111121111Enolase, C-terminal TIM barrel domain
22Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
81189899891190Glutamine amidotransferase class-I
10101091091010101098TCP-1/cpn60 chaperonin family
22ATP synthase A chain
375438556349Glutamine synthetase, catalytic domain
222222122219Triosephosphate isomerase
16191817182019131820178E1-E2 ATPase
777778877772Core histone H2A/H2B/H3/H4
1615151512161351716140Alpha amylase, catalytic domain
223122223221Phorbol esters/diacylglycerol binding domain (C1 domain)
971010109810101194Bacterial transferase hexapeptide (six repeats)
433733433336tRNA synthetases class I (I, L, M and V)
6871077576770Cyclin, N-terminal domain
12361642244227172221259Carboxylesterase family
444444444440DNA polymerase family B
454465455547ATP synthase subunit C
333333323329Peroxidase
8196108161311012103Beta-lactamase
222221232220C-5 cytosine-specific DNA methylase
11NADH dehydrogenase
112Nitrogenase component 1 type Oxidoreductase
27292829282926273031284Calcineurin-like phosphoesterase
9111271291541511105Cellulase (glycosyl hydrolase family 5)
778777787772tRNA synthetases class II (D, K and N)
37433839384342393842399Mitochondrial carrier protein
1111116recA bacterial DNA recombination protein
19352422223530232825263Aminotransferase class I and II
10978810987985Phosphoribosyl transferase domain
11111112111210101111110Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111111110Phosphoglycerate kinase
221121211114Ribosomal protein S4/S9 N-terminal domain
222222222220Ribosomal protein S12/S23
12121211213Bacterial regulatory helix-turn-helix proteins, AraC family
21211112112Chaperonin 10 Kd subunit
12111110111013101211111C2 domain
18161715201417171715166PH domain
1310109106911149101bZIP transcription factor
21312329283030282637283Aldehyde dehydrogenase family
1802202102423051881832591943092,290Fungal Zn(2)-Cys(6) binuclear cluster domain
26342429283026262527275Cytochrome b5-like Heme/Steroid binding domain
353534343235Oxidoreductase molybdopterin binding domain
15221625172217161619185Oxidoreductase NAD-binding domain
25272725242829222625258SNF2 family N-terminal domain
222222222220Ribosomal protein S7p/S5e
21212121212120202120207Ubiquitin-conjugating enzyme
899989889885Isocitrate/isopropylmalate dehydrogenase
222221222219Ribosomal Proteins L2, RNA binding domain
111111111110Hsp90 protein
222122222219Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111111110Dihydrofolate reductase
33471435131Chitin recognition protein
232222122220Cysteine-rich secretory protein family
111111111110Ribosomal protein S3, C-terminal domain
331332113222Cupin
323232313224Annexin
11125Eukaryotic-type carbonic anhydrase
21317Chalcone and stilbene synthases, N-terminal domain
66Bacterial regulatory proteins, luxR family
3444343433352-oxoacid dehydrogenases acyltransferase (catalytic domain)
5649464113860Catalase
112122122115Disintegrin
123114315UDP-glucoronosyl and UDP-glucosyl transferase
51478813879988Aminotransferase class-III
221211222217Ribosomal protein S19
111111111110DNA gyrase B
713786131287990Thiamine pyrophosphate enzyme, central domain
343544443337Lyase
222222222220Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
111216Sodium:neurotransmitter symporter family
112Ferritin-like domain
111111111110Adenylate and Guanylate cyclase catalytic domain
111111111110ATP synthase delta (OSCP) subunit
221112221115Orotidine 5'-phosphate decarboxylase / HUMPS family
111211111111Indole-3-glycerol phosphate synthase
131324211119Aromatic amino acid lyase
111111111110Pyruvate kinase, barrel domain
11101111111111101111108Kinesin motor domain
27272827272327262827267DnaJ domain
14151413151414141414141Proteasome subunit
583559554655Major intrinsic protein
111111111110ATP synthase
435333315333Glycosyl hydrolase family 1
1111111111103'5'-cyclic nucleotide phosphodiesterase
121111111212Profilin
111111111110Ribosomal protein L22p/L17e
222222222220Ribosomal protein L14p/L23e
12101171189910996Ubiquitin family
363444353742Cofilin/tropomyosin-type actin-binding protein
22222222222014-3-3 protein
454245444440Alkaline phosphatase
121122211215Zinc carboxypeptidase
25403037404440313234353Aldo/keto reductase family
14151414171516151416150Myb-like DNA-binding domain
444444444440Forkhead domain
144433644639Glycosyl hydrolases family 32 N-terminal domain
111111111110Ribosomal protein L16p/L10e
222121122217Ribosomal protein S14p/S29e
454454334440FKBP-type peptidyl-prolyl cis-trans isomerase
121111111111Glutathione peroxidase
212112122216
711711710778681Flavodoxin
11Protamine P1
111111111110Calreticulin family
4103598434555Common central domain of tyrosinase
71093699510876Aminotransferase class-V
111111111110Ribonucleotide reductase, small chain
39414145394139414539410DEAD/DEAH box helicase
75758172707977718570755Helicase conserved C-terminal domain
122112212115EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222221222219Ribosomal protein L23
243115223225Pyridoxal-dependent decarboxylase, C-terminal sheet domain
111111111110Ribosomal protein L5
710686121267781Pyridoxal-dependent decarboxylase conserved domain
343434443335Citrate synthase, C-terminal domain
555555555550GHMP kinases N terminal domain
686788887874Biotin carboxylase, N-terminal domain
231313322222Tryptophan synthase alpha chain
14181314141913141517151Pyridoxal-phosphate dependent enzyme
14201616142016171620169NUDIX domain
676466857863pfkB family carbohydrate kinase
3201122111882125112Glycosyl hydrolases family 28
11121118Luciferase-like monooxygenase
222222222220Ribosomal protein L3
222122222219Ribosomal protein L11, RNA binding domain
121413891410111413118Histidine phosphatase superfamily (branch 1)
1111111119Thymidylate synthase
224Lipoxygenase
444454444441ATP synthase alpha/beta chain, C terminal domain
554554454546Calponin homology (CH) domain
454557554549Glutamine amidotransferases class-II
222222222220Ribosomal protein S15
112'Cold-shock' DNA-binding domain
111111111110Fructose-1-6-bisphosphatase, N-terminal domain
111111111110Ribonucleotide reductase, all-alpha domain
222222222220Ribosomal protein S2
223422222425SRF-type transcription factor (DNA-binding and dimerisation domain)
787678667769GATA zinc finger
37664862527149364664531Amino acid permease
454164445340Prolyl oligopeptidase family
22221222217Ribosomal protein L30p/L7e
121510119141171111111Histidine phosphatase superfamily (branch 2)
111111111110Respiratory-chain NADH dehydrogenase, 30 Kd subunit
565867575660Aconitase family (aconitate hydratase)
244234424332Glycosyl hydrolase family 10
334244333534Glycosyl hydrolases family 17
221222222118Ribosomal protein S5, N-terminal domain
111111111110Nucleoside diphosphate kinase
123Galactoside-binding lectin
122222222219Ribosomal protein S10p/S20e
393366673551Arrestin (or S-antigen), N-terminal domain
111111111110Phosphoglucose isomerase
1111111119Carbohydrate phosphorylase
111111111110SecY translocase
111111111110Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222222122219Ribosomal protein L6
6107118116611783Polyprenyl synthetase
578656478662Hexokinase
688979775874Dynamin family
111111111110Transcription factor TFIID (or TATA-binding protein, TBP)
61179998981086Rieske [2Fe-2S] domain
11Bacterial regulatory proteins, lacI family
111111111110Phytochrome region
11Proton-conducting membrane transporter
7108891181081089Biotin-requiring enzyme
121112211113Phosphofructokinase
1111111119Ribosomal protein S17
152425413330Hydroxymethylglutaryl-coenzyme A reductase
454344444541FGGY family of carbohydrate kinases, N-terminal domain
11Hemocyanin, copper containing domain
11Sodium:dicarboxylate symporter family
1318119151817111314139Enoyl-CoA hydratase/isomerase
222222222220Ribosomal protein S9/S16
11PTS HPr component phosphorylation site
222222222220Transcription factor TFIIB repeat
6875789681074Cytidine and deoxycytidylate deaminase zinc-binding region
122122122217Molybdopterin oxidoreductase
5481194457562Chromo (CHRromatin Organisation MOdifier) domain
222222222220Phosphatidylinositol-specific phospholipase C, Y domain
223322223223Phosphatidylinositol-specific phospholipase C, X domain
8129811106891091D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
222222222220Malic enzyme, N-terminal domain
11114PEP-utilising enzyme, mobile domain
2222222222206-phosphogluconate dehydrogenase, C-terminal domain
51171588976985Multicopper oxidase
101098107999990WW domain
111111111211Ribosomal RNA adenine dimethylase
1041091071161121171091081071141,103WD domain, G-beta repeat
565445444546Heavy-metal-associated domain
333333433331Adenylate kinase
344324323230Phosphoglucomutase/phosphomannomutase, C-terminal domain
222212112116Ribosomal protein S8
111111111110Ribosomal protein S11
444444444339LIM domain
1113Matrixin
121231211216Regulator of chromosome condensation (RCC1) repeat
212121122216Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
323523523230chorismate binding enzyme
33333343333160s Acidic ribosomal protein
579667568564Prenyltransferase and squalene oxidase repeat
667366677660Protein kinase C terminal domain
111111111110Single-strand binding protein family
121112121113S-adenosylmethionine synthetase, N-terminal domain
666665756861Bromodomain
11131010151114121114121Acyl-CoA dehydrogenase, C-terminal domain
16151515141615151615152Ubiquitin carboxyl-terminal hydrolase
11111117Ribosomal protein L36
222222222220Ribonuclease T2 family
234433333331HSF-type DNA-binding
222222222220SRP54-type protein, GTPase domain
11111122212Urease alpha-subunit, N-terminal domain
101211125121171010100Serine carboxypeptidase
777867687770Phosphatidylinositol 3- and 4-kinase
132343534533Transketolase, thiamine diphosphate binding domain
343324214127Glycosyl hydrolases family 11
554535444443Inositol monophosphatase family
444344444439Glutaredoxin
476257755553Isocitrate lyase family
222222222220Serine hydroxymethyltransferase
333533333433Iron-containing alcohol dehydrogenase
222222121218Ribosomal protein L10
534732445340KOW motif
111111118Ribosomal protein L34
233222133223RF-1 domain
333443433333Sodium:solute symporter family
111211111111Imidazoleglycerol-phosphate dehydratase
111111111110DNA polymerase family A
111121111313IMP dehydrogenase / GMP reductase domain
111111111110Glucose-6-phosphate dehydrogenase, NAD binding domain
978767678772Protein phosphatase 2C
222222222220Nucleotidyl transferase
314331213324Carbonic anhydrase
121212111113Phosphoribulokinase / Uridine kinase family
61078610657873Fatty acid desaturase
666545656655MutS domain V
111111211111Delta-aminolevulinic acid dehydratase
573645643447Arginase family
666666666660MCM P-loop domain
121312121115Squalene/phytoene synthase
878688899980FHA domain
51865174677889466258662AMP-binding enzyme
353434333334G-protein alpha subunit
557673667658HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
14161310141310121313128His Kinase A (phospho-acceptor) domain
333433333331Armadillo/beta-catenin-like repeat
24282730322928253427284Tetratricopeptide repeat
232222222120Ion transport protein
111111111110DNA gyrase/topoisomerase IV, subunit A
101211810119111011103BRCA1 C Terminus (BRCT) domain
10121098121191210103Glycosyl transferases group 1
756845325449Glycosyl transferase family 2
11131111111SAM domain (Sterile alpha motif)
1111111119linker histone H1 and H5 family
111111111110Ribosomal protein L7/L12 C-terminal domain
21057610635458Pectate lyase
132223423123ribonuclease
11111122212Urease, gamma subunit
555345575549CoA-ligase
29522844384850213731378Phosphopantetheine attachment site
343333243331Formyl transferase
911111012111291112108Metallopeptidase family M24
15121414111212151613134Leucine Rich Repeat
33433624304342324031354alpha/beta hydrolase fold
333333333330RNA polymerase Rpb2, domain 6
443334444437PB1 domain
222222222220Staphylococcal nuclease homologue
11111111111111111212112Rab-GTPase-TBC domain
111111111110Tudor domain
111111111110WH1 domain
545243556443Zinc finger, ZZ type
212111122114HRDC domain
91010810898101092CBS domain
222222222220Ribosomal protein L13
222222222220Ribosomal protein L4/L1 family
121111111111Clp protease
443344434336S1 RNA binding domain
1111111119HIUase/Transthyretin family
335633235336AhpC/TSA family
654445444444tRNA synthetases class I (W and Y)
1111111119UvrD/REP helicase N-terminal domain
546563345445Rhodanese-like domain
212222122218Universal stress protein family
40384129353434234637357Acetyltransferase (GNAT) family
111111118SecE/Sec61-gamma subunits of protein translocation complex
111111111110C-terminal regulatory domain of Threonine dehydratase
222222222220AIR synthase related protein, N-terminal domain
888978987880tRNA synthetase class II core domain (G, H, P, S and T)
111111111110SpoU rRNA Methylase family
11Phage integrase family
222222222220Tetrapyrrole (Corrin/Porphyrin) Methylases
111111111110Glycosyl transferase family, a/b domain
212221112115PDZ domain
463555453444Class II Aldolase and Adducin N-terminal domain
343344343334Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
544444355543Fes/CIP4, and EFC/F-BAR homology domain
566655555452IQ calmodulin-binding motif
222222222220Phosphoinositide 3-kinase family, accessory domain (PIK domain)
555565455550Phospholipase D Active site motif
112211111112Regulator of G protein signaling domain
333333333330GTPase-activator protein for Ras-like GTPase
444556554547RasGEF domain
454355554545RasGEF N-terminal motif
776777777668RhoGAP domain
666555565655RhoGEF domain
223222334225SPRY domain
333323333329RNA polymerase Rpb1, domain 2
11121121111Guanylate kinase
455455555548Gelsolin repeat
879698769776UBA/TS-N domain
16161817171516171618166PHD-finger
1111111119GGL domain
666666666660HECT-domain (ubiquitin-transferase)
212221112115Helix-hairpin-helix motif
111111118MSP (Major sperm protein) domain
777646557963Ribonuclease III domain
323122333325Region in Clathrin and VPS
333232333227RanBP1 domain
212221122217PPIC-type PPIASE domain
433123223326Zn-finger in Ran binding protein and others
1415149141113171519141Zinc finger C-x8-C-x5-C-x3-H type (and similar)
222122222320Poly(ADP-ribose) polymerase catalytic domain
1