PFAM Domains • Rhizopus microsporus var. microsporus ATCC52814 v1.0
Annotations/GenomesBacci1Hesve1Lichy1Morel1Mucci2Phybl2Rhich1Rhimi1_1Rhimi_ATCC52814_1Rhior3Umbra1TotalAnnotation Description
PFAMs
13,4788,54510,46610,1449,5849,21615,2568,6268,51212,2188,515114,560
52154353313357 transmembrane sweet-taste receptor of 3 GCPR
5343454744486538375140511ATPase family associated with various cellular activities (AAA)
6739609452486034334435566ABC transporter
1295691247611788ATP synthase alpha/beta family, nucleotide-binding domain
131321112EGF-like domain
2518191917213018192418228Elongation factor Tu GTP binding domain
7530512637357439405231490Helix-loop-helix DNA-binding domain
424714773250Hsp20/alpha crystallin family
191014141112181010189145Hsp70 protein
1915151314122213131613165KH domain
11Ribulose bisphosphate carboxylase large chain, catalytic domain
111111111110SH2 domain
8948653841379148505545607SH3 domain
1610121111111811111510136Actin
7145516042379545496564624Ankyrin repeat
1510112012101398119128ADP-ribosylation factor family
3526273727333820203523321Eukaryotic aspartyl protease
76957712779682Cyclic nucleotide-binding domain
11Cystatin domain
112Cytochrome b(C-terminal)/b6/petD
11136Cytochrome b/b6/petB
2133113222121Cytochrome c
1233111111217Double-stranded RNA binding motif
5432444343355533344834455EF hand
11211141151194Fe-4S binding domain
212111111112Fibronectin type III domain
422224222123Globin
20141214137191191215146Glutathione S-transferase, C-terminal domain
6222336334135Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
5524371227285129293718347Homeodomain
55Kazal-type serine protease inhibitor domain
8465556334352lactate/malate dehydrogenase, NAD binding domain
22Lectin C-type domain
21131571716281616198176Myosin head (motor domain)
8537642841546335314849535Cytochrome P450
3582052772012372203862102112961652,766Protein kinase domain
2313191118162815152116195Pyridine nucleotide-disulphide oxidoreductase
8242594060548551516539628Ras family
3016332015182717162120233Response regulator receiver domain
122221111RNase H
137821098788971659695112951,163RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
14950Retroviral aspartyl protease
123454703524Reverse transcriptase (RNA-dependent DNA polymerase)
5335326335240Copper/zinc superoxide dismutase (SODC)
1112212112115Iron/manganese superoxide dismutases, alpha-hairpin domain
3115192216242715162411220Subtilase family
6628461447284222224647408Sugar (and other) transporter
1812141915132416151513174Thioredoxin
11Thyroglobulin type-1 repeat
1214Trefoil (P-type) domain
5355425334645Trypsin
1371368998811698Tubulin/FtsZ family, GTPase domain
33von Willebrand factor type A domain
1741001271041402031478788138691,377Zinc finger, C2H2 type
9663706764557760504162705Zinc finger, C3HC4 type (RING finger)
18102117457037232013219412Zinc knuckle
7533658558358Protein-tyrosine phosphatase
4938455045334927263171464short chain dehydrogenase
4619283029233923232834322Zinc-binding dehydrogenase
966610511557676Thiolase, N-terminal domain
3222323233227Beta-ketoacyl synthase, N-terminal domain
53474484452502Fe-2S iron-sulfur cluster binding domain
11Papain family cysteine protease
3232224222125Enolase, C-terminal TIM barrel domain
2215Cytochrome C and Quinol oxidase polypeptide I
11114Cytochrome C oxidase subunit II, periplasmic domain
1381110910179998113Glutamine amidotransferase class-I
1511131211151611111811144TCP-1/cpn60 chaperonin family
11ATP synthase A chain
95755610556467Glutamine synthetase, catalytic domain
2112112111114Triosephosphate isomerase
4934263530264826263425359E1-E2 ATPase
211324141420131413209175Core histone H2A/H2B/H3/H4
213Copper binding proteins, plastocyanin/azurin family
2233114123628Alpha amylase, catalytic domain
1712149472411131310134Phorbol esters/diacylglycerol binding domain (C1 domain)
898685178691094Bacterial transferase hexapeptide (six repeats)
6445448447454tRNA synthetases class I (I, L, M and V)
1815211518183320191716210Cyclin, N-terminal domain
2130312123651Carboxylesterase family
5545548446555DNA polymerase family B
8336548445454ATP synthase subunit C
1111111119Legume lectin domain
4321426333233Peroxidase
123181211433Beta-lactamase
1233242111222C-5 cytosine-specific DNA methylase
1113NADH dehydrogenase
4934393537345033313729408Calcineurin-like phosphoesterase
5656346444855Cellulase (glycosyl hydrolase family 5)
87666610667674tRNA synthetases class II (D, K and N)
8054666163549052536345681Mitochondrial carrier protein
11recA bacterial DNA recombination protein
2719211720203418182215231Aminotransferase class I and II
1491381311161010159128Phosphoribosyl transferase domain
1513151515142716171711175Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1121212112115Phosphoglycerate kinase
3344332335336Ribosomal protein S4/S9 N-terminal domain
4343446446345Ribosomal protein S12/S23
22Bacterial regulatory helix-turn-helix proteins, AraC family
1111221111113Chaperonin 10 Kd subunit
3618323123224120202619288C2 domain
85487932444810253536045649PH domain
4817321528194926293813314bZIP transcription factor
2017251615122212121513179Aldehyde dehydrogenase family
9258803846477752463060626Fungal Zn(2)-Cys(6) binuclear cluster domain
6033422841396937384130458Cytochrome b5-like Heme/Steroid binding domain
223421111219Oxidoreductase molybdopterin binding domain
1915171316132313131414170Oxidoreductase NAD-binding domain
2624242220203622222621263SNF2 family N-terminal domain
4352436335341Ribosomal protein S7p/S5e
2620232522204322222620269Ubiquitin-conjugating enzyme
1161078812779691Isocitrate/isopropylmalate dehydrogenase
6343544445446Ribosomal Proteins L2, RNA binding domain
5353448445348Hsp90 protein
4323364224235Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
2221224221222Dihydrofolate reductase
22Chitin recognition protein
41811614222344Cysteine-rich secretory protein family
5341543343237Ribosomal protein S3, C-terminal domain
22Annexin
22Eukaryotic-type carbonic anhydrase
64556464464542-oxoacid dehydrogenases acyltransferase (catalytic domain)
7233426334340Catalase
6224322223331Disintegrin
2035101117712581UDP-glucoronosyl and UDP-glucosyl transferase
8654669556565Aminotransferase class-III
7343444335343Ribosomal protein S19
1111112111112DNA gyrase B
7321634335340Thiamine pyrophosphate enzyme, central domain
4545446334446Lyase
5234337333339Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1123223223425Ferritin-like domain
4232224223127Adenylate and Guanylate cyclase catalytic domain
2122112112116ATP synthase delta (OSCP) subunit
1111111111111Orotidine 5'-phosphate decarboxylase / HUMPS family
2111111111112Indole-3-glycerol phosphate synthase
4343336335239Pyruvate kinase, barrel domain
3626291528204628283318307Kinesin motor domain
4535353339346737353830428DnaJ domain
1714141414142614142613180Proteasome subunit
1227221112425Major intrinsic protein
211222211216ATP synthase
22Glycosyl hydrolase family 1
125838696683743'5'-cyclic nucleotide phosphodiesterase
1112113222117Profilin
5343458445247Ribosomal protein L22p/L17e
4343334336339Ribosomal protein L14p/L23e
3118232522233521192820265Ubiquitin family
76876412668676Cofilin/tropomyosin-type actin-binding protein
636433844735114-3-3 protein
5354435334241Alkaline phosphatase
527Zinc carboxypeptidase
4216291726203418181928267Aldo/keto reductase family
3931373723206133313325370Myb-like DNA-binding domain
141010810101367127107Forkhead domain
11125Glycosyl hydrolases family 32 N-terminal domain
1111112112113Ribosomal protein L16p/L10e
5342442334337Ribosomal protein S14p/S29e
97796610556777FKBP-type peptidyl-prolyl cis-trans isomerase
2122123223121Glutathione peroxidase
5443536444345
211717615132011111414159Flavodoxin
11Tropomyosin
1115122112118Calreticulin family
95611759555774Aminotransferase class-V
3122312112119Ribonucleotide reductase, small chain
5248515648478547495745585DEAD/DEAH box helicase
99848893817412877788475961Helicase conserved C-terminal domain
2111112111113EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
5343434335340Ribosomal protein L23
313411112118Pyridoxal-dependent decarboxylase, C-terminal sheet domain
5343355447346Ribosomal protein L5
6345455334648Pyridoxal-dependent decarboxylase conserved domain
2122122111116Citrate synthase, C-terminal domain
76666612666673GHMP kinases N terminal domain
1281181111168998111Biotin carboxylase, N-terminal domain
1111112112113Tryptophan synthase alpha chain
1299910915991011112Pyridoxal-phosphate dependent enzyme
156'Paired box' domain
2618181723163920212315236NUDIX domain
106647610666673pfkB family carbohydrate kinase
5512977518362Glycosyl hydrolases family 28
5322435335237Ribosomal protein L3
6543457447453Ribosomal protein L11, RNA binding domain
1381181111161010710115Histidine phosphatase superfamily (branch 1)
1111112111112Thymidylate synthase
1188691237611788ATP synthase alpha/beta chain, C terminal domain
131016131292112998132Calponin homology (CH) domain
2114Bacterial dnaA protein
1079101269668588Glutamine amidotransferases class-II
3242326335336Ribosomal protein S15
213322211219'Cold-shock' DNA-binding domain
758458446455Thaumatin family
1111112112113Fructose-1-6-bisphosphatase, N-terminal domain
5233426333236Ribonucleotide reductase, all-alpha domain
7333444326342Ribosomal protein S2
147134107149996102SRF-type transcription factor (DNA-binding and dimerisation domain)
6530432436356839403922441GATA zinc finger
3523193821193418182425274Amino acid permease
985106612667883Prolyl oligopeptidase family
6362558447151Ribosomal protein L30p/L7e
63511527455558Histidine phosphatase superfamily (branch 2)
2121112111114Respiratory-chain NADH dehydrogenase, 30 Kd subunit
6466659556664Aconitase family (aconitate hydratase)
11Glycosyl hydrolase family 10
4245312322533Glycosyl hydrolases family 17
5353453336343Ribosomal protein S5, N-terminal domain
6542649555354Nucleoside diphosphate kinase
7464652341446Tetraspanin family
3332336336237Ribosomal protein S10p/S20e
4617251222223220161720249Arrestin (or S-antigen), N-terminal domain
1131112111114Phosphoglucose isomerase
32123222118Carbohydrate phosphorylase
4121224233125SecY translocase
1111112112113Respiratory-chain NADH dehydrogenase, 49 Kd subunit
4344346334341Ribosomal protein L6
6553549555355Polyprenyl synthetase
1781261171688118112Hexokinase
968117813778690Dynamin family
1112112112114Biopterin-dependent aromatic amino acid hydroxylase
3121221112117Transcription factor TFIID (or TATA-binding protein, TBP)
5356555444450Rieske [2Fe-2S] domain
12148Proton-conducting membrane transporter
151113912101910111210132Biotin-requiring enzyme
4221224222225Phosphofructokinase
3223221223224Ribosomal protein S17
2231313222122Hydroxymethylglutaryl-coenzyme A reductase
94536612667569FGGY family of carbohydrate kinases, N-terminal domain
313121211116Sodium:dicarboxylate symporter family
1712141014112312121312150Enoyl-CoA hydratase/isomerase
5333448446347Ribosomal protein S9/S16
3225334223332Transcription factor TFIIB repeat
1051069410665778Cytidine and deoxycytidylate deaminase zinc-binding region
211312112115Molybdopterin oxidoreductase
231415169223718172396416Chromo (CHRromatin Organisation MOdifier) domain
11Phosphatidylinositol-specific phospholipase C, Y domain
11Phosphatidylinositol-specific phospholipase C, X domain
6565558556561D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
7462548555354Malic enzyme, N-terminal domain
213PEP-utilising enzyme, mobile domain
31213242231246-phosphogluconate dehydrogenase, C-terminal domain
7786557345562Multicopper oxidase
26131617872513121712166WW domain
3233336333335Ribosomal RNA adenine dimethylase
2041571713491581622881571611731452,125WD domain, G-beta repeat
11ATP synthase, Delta/Epsilon chain, long alpha-helix domain
112Calponin family repeat
5447545333447Heavy-metal-associated domain
84546510555461Adenylate kinase
2232224223226Phosphoglucomutase/phosphomannomutase, C-terminal domain
5343336335240Ribosomal protein S8
4333436333338Ribosomal protein S11
191412913142415121112155LIM domain
3533148446445Regulator of chromosome condensation (RCC1) repeat
4443424445341Ribosomal protein S13/S18
21111211111Tau and MAP protein, tubulin-binding repeat
112NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
4222223222225chorismate binding enzyme
159968713771159760s Acidic ribosomal protein
22CUB domain
4544448444449Prenyltransferase and squalene oxidase repeat
17101499111710101410131Protein kinase C terminal domain
11Spectrin repeat
1112112112114Single-strand binding protein family
2111112112114S-adenosylmethionine synthetase, N-terminal domain
2316171620142718161812197Bromodomain
2116201815162517172012197Acyl-CoA dehydrogenase, C-terminal domain
2719232526214322212519271Ubiquitin carboxyl-terminal hydrolase
111111118Ribosomal protein L36
2423144322330Ribonuclease T2 family
291124720142514151812189HSF-type DNA-binding
2222224222224SRP54-type protein, GTPase domain
3211222111117Urease alpha-subunit, N-terminal domain
71294577447369Serine carboxypeptidase
151210111310211212129137Phosphatidylinositol 3- and 4-kinase
6232223222228Transketolase, thiamine diphosphate binding domain
12112111212WHEP-TRS domain
2222224222224Inositol monophosphatase family
858610513666679Glutaredoxin
4221214222224Isocitrate lyase family
2222224222224Serine hydroxymethyltransferase
2111112112114Iron-containing alcohol dehydrogenase
3412425335133Ribosomal protein L10
14759108766237102KOW motif
1111112111112Ribosomal protein L34
1121117Ribosomal protein L33
3333325333233RF-1 domain
111212111112Sodium:solute symporter family
2111112111113Imidazoleglycerol-phosphate dehydratase
1111111111111DNA polymerase family A
3111212112116IMP dehydrogenase / GMP reductase domain
5343334224235Glucose-6-phosphate dehydrogenase, NAD binding domain
17811111011181110176130Protein phosphatase 2C
75736411666566Nucleotidyl transferase
3223221111119Carbonic anhydrase
3222214223225Phosphoribulokinase / Uridine kinase family
1377118161477106106Fatty acid desaturase
66767610665671MutS domain V
1111212111113Delta-aminolevulinic acid dehydratase
3352234223332Arginase family
6668669667672MCM P-loop domain
3331346334235Squalene/phytoene synthase
2918251717183215172014222FHA domain
112NADH-ubiquinone/plastoquinone oxidoreductase chain 6
5728473537365730303925421AMP-binding enzyme
171314812101488119124G-protein alpha subunit
3112331321233719202916254HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
112Cytochrome c oxidase subunit III
15718137813871212120His Kinase A (phospho-acceptor) domain
198871010188897112Armadillo/beta-catenin-like repeat
5741443936317037344336468Tetratricopeptide repeat
186914879444891Ion transport protein
1111112111112DNA gyrase/topoisomerase IV, subunit A
13111110106151211812119BRCA1 C Terminus (BRCT) domain
991059812779792Glycosyl transferases group 1
8456457335656Glycosyl transferase family 2
934123107712361SAM domain (Sterile alpha motif)
213311113319linker histone H1 and H5 family
112112112113Ribosomal protein L7/L12 C-terminal domain
11ribonuclease
3211222111117Urease, gamma subunit
7367435335349CoA-ligase
94848884410673Phosphopantetheine attachment site
2222224222224Formyl transferase
11Cellulose binding domain
1614131315142615161712171Metallopeptidase family M24
4527358733334727253426419Leucine Rich Repeat
3322303825232816171632280alpha/beta hydrolase fold
4345335335341RNA polymerase Rpb2, domain 6
17121711810178998126PB1 domain
2322224222225Staphylococcal nuclease homologue
4524321727294122222620305Rab-GTPase-TBC domain
1111112111112Tudor domain
3222213111220WH1 domain