Due to a planned NERSC power outage, JGI portals will be unavailable 6:00am PDT July 10 - 11:59pm PDT July 14. System Status updates available here.
PFAM Domains • Lentinula boryana ET3784 v1.0
Annotations/GenomesLboET3784_1Lbo_TFB10291_1Lbo_TFB10827_1Led_CS584_1Lenafn1Lenafn_TMI1502_1Lened_B_1_1Lenedo1Lenlat1Lennov1Lenra_T_1Lenrap1Lenrap1_155Lentinedodes1LraINPA1820_1LraJLM1587_1LraTFB9207_1TotalAnnotation Description
PFAMs
9,7659,7499,61810,23810,2109,6699,08310,2079,8989,65310,10910,41010,1049,72010,31410,08210,172169,001
1111221111127 transmembrane receptor (Secretin family)
4240404243414345414139384042414040698ATPase family associated with various cellular activities (AAA)
3941424546425749444344444446414343753ABC transporter
4445443654544444472ATP synthase alpha/beta family, nucleotide-binding domain
1515151715161715151515171716161516267Elongation factor Tu GTP binding domain
1011121314131013121312141213121413211Helix-loop-helix DNA-binding domain
88799879889997989141Hsp20/alpha crystallin family
88781191761011988121078157Hsp70 protein
77777787777787777121KH domain
1616152019171321171816171818171516289SH3 domain
1111111114121414121211141313121111207Actin
54720581113101215142713451917245Ankyrin repeat
88888888889998999142ADP-ribosylation factor family
3130303433323529313028292829292728513Eukaryotic aspartyl protease
3333333333333333351Cyclic nucleotide-binding domain
111111111111111116Cytochrome c
79698849981198711910142Double-stranded RNA binding motif
2131112111211112123EF hand
8109898891076659767132Glutathione S-transferase, C-terminal domain
1111111111111111117Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
7991413971511988814888165Homeodomain
2222222222212222233lactate/malate dehydrogenase, NAD binding domain
66656777665665576102Myosin head (motor domain)
1201161141291281291391281331291411431351331411421412,241Cytochrome P450
1931961941982011991782032011891982112062002021952033,367Protein kinase domain
1213131413141413141414141414141414232Pyridine nucleotide-disulphide oxidoreductase
2827272626262626252628272725272627450Ras family
1111111111107991112111010111011176Response regulator receiver domain
1441124202911522152030335172325308RNase H
64626565666158686564676864616669681,101RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
123Reverse transcriptase (RNA-dependent DNA polymerase)
2222222222222222234Iron/manganese superoxide dismutases, alpha-hairpin domain
141514141312911121113151410141514220Subtilase family
4444435149485247494847474748484747806Sugar (and other) transporter
1212131111111210111011101011121111189Thioredoxin
6556656554657555793Tubulin/FtsZ family, GTPase domain
111121119von Willebrand factor type A domain
2928283133261730302431312631313233491Zinc finger, C2H2 type
12911212016111618131012818888219Zinc finger, C3HC4 type (RING finger)
612141212911871415131611201316209Zinc knuckle
2222322222222222336Protein-tyrosine phosphatase
79767590967685908581898679868280821,417short chain dehydrogenase
4544435352484251535150504945505152829Zinc-binding dehydrogenase
5555556555555555586Thiolase, N-terminal domain
77686759554865755105Beta-ketoacyl synthase, N-terminal domain
11111112111111111182Fe-2S iron-sulfur cluster binding domain
1111111111111111117Enolase, C-terminal TIM barrel domain
88889998888889988141Glutamine amidotransferase class-I
1011101011101910101110101211101111187TCP-1/cpn60 chaperonin family
3333333333333333351Glutamine synthetase, catalytic domain
111111111111211117Triosephosphate isomerase
1314141517151516151514181616151415257E1-E2 ATPase
1615151916181617171918181815181818291Core histone H2A/H2B/H3/H4
1111121212121112121213111112111111197Alpha amylase, catalytic domain
4445654655555554582Phorbol esters/diacylglycerol binding domain (C1 domain)
5545545554655554582Bacterial transferase hexapeptide (six repeats)
4444446446444444472tRNA synthetases class I (I, L, M and V)
1513131616171116161514141511151414245Cyclin, N-terminal domain
2522242020192323201927292719272726397Carboxylesterase family
4444547564445454477DNA polymerase family B
3333433332332333350ATP synthase subunit C
1099111110101111101010101010109171Peroxidase
2223333333222322242Beta-lactamase
5454444444444444470C-5 cytosine-specific DNA methylase
2726252423242125252523232222232423405Calcineurin-like phosphoesterase
2121212122212021222120202021202020352Cellulase (glycosyl hydrolase family 5)
66678577657766666107tRNA synthetases class II (D, K and N)
4241373938373738373837373737373838645Mitochondrial carrier protein
111111118recA bacterial DNA recombination protein
1817171515151416161518181715181817279Aminotransferase class I and II
3334434444344433461Phosphoribosyl transferase domain
1516161515151615151515151615161515260Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
1111111111111111117Phosphoglycerate kinase
2242222222222222236Ribosomal protein S4/S9 N-terminal domain
2222222222222222234Ribosomal protein S12/S23
1111111111111111117Chaperonin 10 Kd subunit
1515161616151215151516141515161415255C2 domain
89811109689107779776138PH domain
1717171516171415151615151615161616268bZIP transcription factor
1817171919182321201819191818192219324Aldehyde dehydrogenase family
85868580724764827752817561628178811,249Fungal Zn(2)-Cys(6) binuclear cluster domain
2625222424231926232324252623262726412Cytochrome b5-like Heme/Steroid binding domain
2223222322222222236Oxidoreductase molybdopterin binding domain
88888859889888998137Oxidoreductase NAD-binding domain
2326232728272633282628252530262924454SNF2 family N-terminal domain
2222222222323223338Ribosomal protein S7p/S5e
2223222322222222222221242222212122375Ubiquitin-conjugating enzyme
67666685666666666104Isocitrate/isopropylmalate dehydrogenase
2222221222222222233Ribosomal Proteins L2, RNA binding domain
2222322232232243341Hsp90 protein
2222222222222222234Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1111111111111111117Dihydrofolate reductase
3333332333333333350Cysteine-rich secretory protein family
1111111111112111118Ribosomal protein S3, C-terminal domain
222111111221111121Cupin
2222222332222222236Annexin
33333343334344434572-oxoacid dehydrogenases acyltransferase (catalytic domain)
2222211111222122228Catalase
111111111111111116Disintegrin
10101077687761010118111010148UDP-glucoronosyl and UDP-glucosyl transferase
6555555555555556587Aminotransferase class-III
2222221222222122232Ribosomal protein S19
1111111111111111117DNA gyrase B
9553232333444334464Thiamine pyrophosphate enzyme, central domain
5554445444544444473Lyase
2222222222222222234Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
1111111111111111117Adenylate and Guanylate cyclase catalytic domain
1111111111111111117ATP synthase delta (OSCP) subunit
1111111111111111117Orotidine 5'-phosphate decarboxylase / HUMPS family
2222222222222122233Indole-3-glycerol phosphate synthase
2222222222222222234Aromatic amino acid lyase
1111111111111111117Pyruvate kinase, barrel domain
1210101013121212121210991091011183Kinesin motor domain
3331313234322833323031313030292830525DnaJ domain
1414141515151516151514141515161414250Proteasome subunit
3332221332444344451Major intrinsic protein
1111111111111111117ATP synthase
2223333233333333347Glycosyl hydrolase family 1
11111111111111111173'5'-cyclic nucleotide phosphodiesterase
1111111111111111117Profilin
1222222222222222233Ribosomal protein L22p/L17e
2222222222222222234Ribosomal protein L14p/L23e
1615151617171317161717202115181415279Ubiquitin family
5555555555555555585Cofilin/tropomyosin-type actin-binding protein
222222222255523224414-3-3 protein
3740384644434343454347454542474647741Aldo/keto reductase family
111010101097999109912101111166Myb-like DNA-binding domain
87677676576866776112Forkhead domain
2222222222222222234Ribosomal protein L16p/L10e
222222122222222231Ribosomal protein S14p/S29e
3333333333333333351FKBP-type peptidyl-prolyl cis-trans isomerase
1111111111111111117Glutathione peroxidase
11Dehydrin
5555553655768555792Flavodoxin
1111111111211121119Calreticulin family
5444444444222422257Common central domain of tyrosinase
1010101010111110101010101011101010173Aminotransferase class-V
2222324322463233348Ribonucleotide reductase, small chain
64596060615748635755657472578066681,066DEAD/DEAH box helicase
90938793948781928686941009893106100961,576Helicase conserved C-terminal domain
111111111111111116Fructose-bisphosphate aldolase class-I
1111111111111121219EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
2222221222222222233Ribosomal protein L23
1111111111111111117Pyridoxal-dependent decarboxylase, C-terminal sheet domain
1111111111152121123Ribosomal protein L5
5656556755555667695Pyridoxal-dependent decarboxylase conserved domain
4444447444444444471Citrate synthase, C-terminal domain
7655554555555555587GHMP kinases N terminal domain
66666656666676667103Biotin carboxylase, N-terminal domain
1111111111111111117Tryptophan synthase alpha chain
999999129998889888150Pyridoxal-phosphate dependent enzyme
161616171714916171615171514151516261NUDIX domain
66666556666666666100pfkB family carbohydrate kinase
1212121516131213151512111114111111216Glycosyl hydrolases family 28
2222222122222222233Ribosomal protein L3
2222221222232222234Ribosomal protein L11, RNA binding domain
1111101211121212121111121211121212196Histidine phosphatase superfamily (branch 1)
1111211111111111118Thymidylate synthase
111111111111111116Lipoxygenase
4445442554444444469ATP synthase alpha/beta chain, C terminal domain
4444444444545455573Calponin homology (CH) domain
3333333333333333351Glutamine amidotransferases class-II
3222222222222222235Ribosomal protein S15
4445434544333433363Thaumatin family
1111111111111111117Fructose-1-6-bisphosphatase, N-terminal domain
1111412311211121Ribonucleotide reductase, all-alpha domain
2222222222222122233Ribosomal protein S2
3333333333333343352SRF-type transcription factor (DNA-binding and dimerisation domain)
1315141418161615131312111315121314237GATA zinc finger
1187887977771087888135Amino acid permease
87888988887899998139Prolyl oligopeptidase family
1223221222333333340Ribosomal protein L30p/L7e
999101091111101010101011111010170Histidine phosphatase superfamily (branch 2)
1111111111111111117Respiratory-chain NADH dehydrogenase, 30 Kd subunit
5554746444444444476Aconitase family (aconitate hydratase)
3333334333333333352Glycosyl hydrolase family 10
4444443334443432360Glycosyl hydrolases family 17
2222222222222222234Ribosomal protein S5, N-terminal domain
222222222222222232Nucleoside diphosphate kinase
4443442444433433360Tetraspanin family
2222222222122222233Ribosomal protein S10p/S20e
4432121121343133341Arrestin (or S-antigen), N-terminal domain
1111111111111111117Phosphoglucose isomerase
1111111111111111117Carbohydrate phosphorylase
1111112111111111118SecY translocase
1111112111111111118Respiratory-chain NADH dehydrogenase, 49 Kd subunit
2222222222222232235Ribosomal protein L6
66666687667776777111Polyprenyl synthetase
2222222222222222234Hexokinase
97710101010129999910999157Dynamin family
1111111111111111117Transcription factor TFIID (or TATA-binding protein, TBP)
3333333333323333350Rieske [2Fe-2S] domain
11111111121111116Phytochrome region
8889895989810810878140Biotin-requiring enzyme
1111111111111111117Phosphofructokinase
222222222221212129Ribosomal protein S17
1112111211111111119Hydroxymethylglutaryl-coenzyme A reductase
4444444444444444468FGGY family of carbohydrate kinases, N-terminal domain
9991011981010109999999158Enoyl-CoA hydratase/isomerase
2222222222222222234Ribosomal protein S9/S16
2222322222322223338Transcription factor TFIIB repeat
66666666666667666103Cytidine and deoxycytidylate deaminase zinc-binding region
1111111111111111117Molybdopterin oxidoreductase
10121911877979871081099160Chromo (CHRromatin Organisation MOdifier) domain
3333333333333333351Phosphatidylinositol-specific phospholipase C, Y domain
65577756667777777109Phosphatidylinositol-specific phospholipase C, X domain
78888879888888888135D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
3333333333333333351Malic enzyme, N-terminal domain
11111111111111111176-phosphogluconate dehydrogenase, C-terminal domain
1313141514141314141415151514151516243Multicopper oxidase
68888898888877888133WW domain
2222222222222222234Ribosomal RNA adenine dimethylase
1311241231421431261211441231261431321381331381291272,243WD domain, G-beta repeat
3334443544343533361Heavy-metal-associated domain
3333432343333333352Adenylate kinase
2322222222333233341Phosphoglucomutase/phosphomannomutase, C-terminal domain
2222222222122122232Ribosomal protein S8
2224433333222322244Ribosomal protein S11
66666546657766676101LIM domain
4446666666666666797Regulator of chromosome condensation (RCC1) repeat
2222222322222221234Ribosomal protein S13/S18
2222222222222222234chorismate binding enzyme
3334433344334