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PFAM Domains • Piromyces sp. UH3-1 v1.0
Annotations/GenomesAnasp1Caecom1Chyhya1Chytri1Enthel1Gervar1Neosp1Orpsp1_1PirE2_1Pirfi3Piromy1TotalAnnotation Description
PFAMs
9,30513,58913,27412,4088,6599,04813,98710,8388,4228,15114,488122,169
453124711087 transmembrane receptor (rhodopsin family)
337 transmembrane receptor (Secretin family)
45783717192248411040934507 transmembrane sweet-taste receptor of 3 GCPR
4241555445456043404044509ATPase family associated with various cellular activities (AAA)
1041081131078064138101144621561,177ABC transporter
4498446544456ATP synthase alpha/beta family, nucleotide-binding domain
2131512EGF-like domain
12112220171715691210151Elongation factor Tu GTP binding domain
792023511143788115Helix-loop-helix DNA-binding domain
525516137314622322360429Hsp20/alpha crystallin family
171012910117834243111247Hsp70 protein
9111010710211271113121KH domain
1214SH2 domain
1018666512525150115858952845SH3 domain
111011109111714101010123Actin
552215272318155781,0847092682253,714Ankyrin repeat
111516222223PAN domain
112199810189131241161ADP-ribosylation factor family
1121381116211193Eukaryotic aspartyl protease
111572632314161181011254Cyclic nucleotide-binding domain
11114Cytochrome c
2234423311227Double-stranded RNA binding motif
391113613527385211EF hand
22322114Fe-4S binding domain
22Fibronectin type II domain
1333111114Fibronectin type III domain
11Globin
482213777133984Glutathione S-transferase, C-terminal domain
3423127333334Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
1210896151123411138247Homeodomain
112Laminin EGF domain
1323244122226lactate/malate dehydrogenase, NAD binding domain
123Lectin C-type domain
13121417772427131413161Myosin head (motor domain)
2541319106Cytochrome P450
1831943062551921533212141521831872,340Protein kinase domain
34131110116233470Pyridine nucleotide-disulphide oxidoreductase
3747545531316433273340452Ras family
538117355433387Response regulator receiver domain
11131311113RNase H
90928878627014387769189966RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11Retroviral aspartyl protease
138121151Reverse transcriptase (RNA-dependent DNA polymerase)
121231241325189Serpin (serine protease inhibitor)
668323Copper/zinc superoxide dismutase (SODC)
113431111117Iron/manganese superoxide dismutases, alpha-hairpin domain
148581917912571078039119665Subtilase family
25212234711427251725317Sugar (and other) transporter
2122243010142932151722236Thioredoxin
613515333Trefoil (P-type) domain
11Trypsin
881077812669889Tubulin/FtsZ family, GTPase domain
1012111616125569von Willebrand factor type A domain
2215von Willebrand factor type D domain
481810710427178028475023549Zinc finger, C2H2 type
6548778913648688350Zinc finger, C3HC4 type (RING finger)
3024127784169202315256Zinc knuckle
3353427344442Protein-tyrosine phosphatase
151555563135171212915272short chain dehydrogenase
5618161216133675107Zinc-binding dehydrogenase
1175542111129Thiolase, N-terminal domain
15124225289151119122Beta-ketoacyl synthase, N-terminal domain
21522342231272Fe-2S iron-sulfur cluster binding domain
31619Papain family cysteine protease
1111112111112Enolase, C-terminal TIM barrel domain
871088814888895Glutamine amidotransferase class-I
1214121310122114111212143TCP-1/cpn60 chaperonin family
2236224122228Glutamine synthetase, catalytic domain
112212211114Triosephosphate isomerase
1318443925222212121622245E1-E2 ATPase
771819715145689115Core histone H2A/H2B/H3/H4
11Copper binding proteins, plastocyanin/azurin family
1181327121175976Alpha amylase, catalytic domain
131211847252481410136Phorbol esters/diacylglycerol binding domain (C1 domain)
107171087161081610119Bacterial transferase hexapeptide (six repeats)
3445555544347tRNA synthetases class I (I, L, M and V)
17181430219281781820200Cyclin, N-terminal domain
32124734745402642258Carboxylesterase family
8661054586101381DNA polymerase family B
3345346133338ATP synthase subunit C
11Legume lectin domain
25176553Peroxidase
975425Beta-lactamase
2266484122239C-5 cytosine-specific DNA methylase
6949233215196649403861461Calcineurin-like phosphoesterase
25211110474942362451280Cellulase (glycosyl hydrolase family 5)
3365566323345tRNA synthetases class II (D, K and N)
1315676746422413111316327Mitochondrial carrier protein
2025202214154722262633270Aminotransferase class I and II
10576451781010587Phosphoribosyl transferase domain
1517262015171913151617190Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
2212114122220Phosphoglycerate kinase
224312312222Ribosomal protein S4/S9 N-terminal domain
125223322224Ribosomal protein S12/S23
112Bacterial regulatory helix-turn-helix proteins, AraC family
111211211112Chaperonin 10 Kd subunit
3744192213206141313335356C2 domain
4024191016147246274527340PH domain
91049417121457711172bZIP transcription factor
15182013111111375Aldehyde dehydrogenase family
189686921172913131721295Fungal Zn(2)-Cys(6) binuclear cluster domain
1374641222912581314210Cytochrome b5-like Heme/Steroid binding domain
13127Oxidoreductase molybdopterin binding domain
3214135112213359Oxidoreductase NAD-binding domain
1820373021242923181630266SNF2 family N-terminal domain
123222311118Ribosomal protein S7p/S5e
2627353422264420142627301Ubiquitin-conjugating enzyme
3577566333351Isocitrate/isopropylmalate dehydrogenase
1134221111118Ribosomal Proteins L2, RNA binding domain
10818Chitinase class I
4432245333336Hsp90 protein
3343225133332Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
1121112111113Dihydrofolate reductase
130196224186180223922031,218Chitin recognition protein
1021283053141623813171Cysteine-rich secretory protein family
1122122111115Ribosomal protein S3, C-terminal domain
213Cupin
6819656748Annexin
11Extracellular link domain
1092111125Eukaryotic-type carbonic anhydrase
11Chalcone and stilbene synthases, N-terminal domain
4434152-oxoacid dehydrogenases acyltransferase (catalytic domain)
123Catalase
11114Disintegrin
3222112221220UDP-glucoronosyl and UDP-glucosyl transferase
1164342111125Aminotransferase class-III
215422211121Ribosomal protein S19
111112211112DNA gyrase B
4411125145533Thiamine pyrophosphate enzyme, central domain
3266236223338Lyase
141654311271471699Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
324232218Sodium:neurotransmitter symporter family
1113Ferritin-like domain
353327141272238116Adenylate and Guanylate cyclase catalytic domain
22116ATP synthase delta (OSCP) subunit
1121111111112Orotidine 5'-phosphate decarboxylase / HUMPS family
2211113122218Indole-3-glycerol phosphate synthase
325Aromatic amino acid lyase
155235221228Pyruvate kinase, barrel domain
2528302420193635242423288Kinesin motor domain
3640464123325424263636394DnaJ domain
1314232214142710111414176Proteasome subunit
119924211131Major intrinsic protein
1131121111114ATP synthase
77461161016102198Glycosyl hydrolase family 1
6101012107163788973'5'-cyclic nucleotide phosphodiesterase
12342222220Profilin
1154332111123Ribosomal protein L22p/L17e
1132222211118Ribosomal protein L14p/L23e
213Resolvase, N terminal domain
2322172119204621152428256Ubiquitin family
910657416839885Cofilin/tropomyosin-type actin-binding protein
112111211111314-3-3 protein
122351221120Alkaline phosphatase
4477654334653Zinc carboxypeptidase
233281710112714191228201Aldo/keto reductase family
22757912201712206137Myb-like DNA-binding domain
4422217144536Forkhead domain
2111115Glycosyl hydrolases family 32 N-terminal domain
14222213Ribosomal protein L16p/L10e
124322211119Ribosomal protein S14p/S29e
661012669456676FKBP-type peptidyl-prolyl cis-trans isomerase
22431127251553Glutathione peroxidase
12115
5457253744551Flavodoxin
11Tropomyosin
3353224633337Calreticulin family
34329580Common central domain of tyrosinase
11114Thymidine kinase
33108864133352Aminotransferase class-V
22217Ribonucleotide reductase, small chain
4247646147555242354250537DEAD/DEAH box helicase
7176929274899263557485863Helicase conserved C-terminal domain
2114Fructose-bisphosphate aldolase class-I
1111111211112EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
1152222111119Ribosomal protein L23
2111112111113Pyridoxal-dependent decarboxylase, C-terminal sheet domain
2221114322222Ribosomal protein L5
2269255531242Pyridoxal-dependent decarboxylase conserved domain
1146542111127Citrate synthase, C-terminal domain
6468556645560GHMP kinases N terminal domain
33127756233253Biotin carboxylase, N-terminal domain
2222111122319Tryptophan synthase alpha chain
119121297162111012111Pyridoxal-phosphate dependent enzyme
111712137141814121219149NUDIX domain
3366633123339pfkB family carbohydrate kinase
95311221Glycosyl hydrolases family 28
1133222111118Ribosomal protein L3
111422211116Ribosomal protein L11, RNA binding domain
87573810556670Histidine phosphatase superfamily (branch 1)
1113Rubredoxin
2411311Chloramphenicol acetyltransferase
1121311211115Thymidylate synthase
145Lipoxygenase
4498446444455ATP synthase alpha/beta chain, C terminal domain
161513127122311101516150Calponin homology (CH) domain
3445345233440Glutamine amidotransferases class-II
11Phosphoenolpyruvate carboxylase
3232223222225Ribosomal protein S15
2111422215'Cold-shock' DNA-binding domain
2226Thaumatin family
11114Fructose-1-6-bisphosphatase, N-terminal domain
32117Ribonucleotide reductase, all-alpha domain
2333223122225Ribosomal protein S2
2321326222328SRF-type transcription factor (DNA-binding and dimerisation domain)
141432331211247121412185GATA zinc finger
1131526231144Amino acid permease
5891317893351393Prolyl oligopeptidase family
2224213321224Ribosomal protein L30p/L7e
5453356555450Histidine phosphatase superfamily (branch 2)
21115Respiratory-chain NADH dehydrogenase, 30 Kd subunit
4454548545452Aconitase family (aconitate hydratase)
15125829282141204Glycosyl hydrolase family 10
113232211117Ribosomal protein S5, N-terminal domain
4578454323449Nucleoside diphosphate kinase
184374212537Tetraspanin family
14112211114Ribosomal protein S10p/S20e
11141568221151Arrestin (or S-antigen), N-terminal domain
11Interleukin-1 / 18
112111211112Phosphoglucose isomerase
112212311115Carbohydrate phosphorylase
243112111117SecY translocase
23117Respiratory-chain NADH dehydrogenase, 49 Kd subunit
1123222111117Ribosomal protein L6
2245432222230Polyprenyl synthetase
4444228544445Hexokinase
412954772431168Dynamin family
25119Biopterin-dependent aromatic amino acid hydroxylase
2222112522223Transcription factor TFIID (or TATA-binding protein, TBP)
652417Rieske [2Fe-2S] domain
11Phytochrome region
1113976211142Biotin-requiring enzyme
5321218434437Phosphofructokinase
114223211118Ribosomal protein S17
1211117Hydroxymethylglutaryl-coenzyme A reductase
2123132121220FGGY family of carbohydrate kinases, N-terminal domain
3333234423434FERM central domain
2221121112Sodium:dicarboxylate symporter family
2141211622251Enoyl-CoA hydratase/isomerase
2144212111120Ribosomal protein S9/S16
253312332226Transcription factor TFIIB repeat
5597566325558Cytidine and deoxycytidylate deaminase zinc-binding region
22116Molybdopterin oxidoreductase
447858722174591Chromo (CHRromatin Organisation MOdifier) domain
111111221112Phosphatidylinositol-specific phospholipase C, Y domain
414111278352268Phosphatidylinositol-specific phospholipase C, X domain
4434417134439D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
232216122425Malic enzyme, N-terminal domain
35921323PEP-utilising enzyme, mobile domain
112156-phosphogluconate dehydrogenase, C-terminal domain
511622Multicopper oxidase
13121921107191471510147WW domain
1111211211214Ribosomal RNA adenine dimethylase
1781841951821831702652131501971862,103WD domain, G-beta repeat
1334424Heavy-metal-associated domain
5699989854577Adenylate kinase
2235324122228Phosphoglucomutase/phosphomannomutase, C-terminal domain
114322211118Ribosomal protein S8
114212211116Ribosomal protein S11
152411615132416121414164LIM domain
112Matrixin
231010952112348Regulator of chromosome condensation (RCC1) repeat
1144222111120Ribosomal protein S13/S18
112
1124Tau and MAP protein, tubulin-binding repeat
1122221111115chorismate binding enzyme
569433935465760s Acidic ribosomal protein
112CUB domain
4353435234339Prenyltransferase and squalene oxidase repeat
11111710582265129116Protein kinase C terminal domain
3317Single-strand binding protein family
22Type II/IV secretion system protein
2111114324222S-adenosylmethionine synthetase, N-terminal domain
1516121014172315131417166Bromodomain
1616121054Acyl-CoA dehydrogenase, C-terminal domain
1620242016152623141419207Ubiquitin carboxyl-terminal hydrolase
11114Ribosomal protein L36
225633311127Ribonuclease T2 family
876625176551178HSF-type DNA-binding
23223312220SRP54-type protein, GTPase domain
11114Urease alpha-subunit, N-terminal domain
221115344212248Serine carboxypeptidase
913151391214131089125Phosphatidylinositol 3- and 4-kinase
2311113742429Transketolase, thiamine diphosphate binding domain
29282443563662278Glycosyl hydrolases family 11
1111222211115WHEP-TRS domain
2232223322225Inositol monophosphatase family
6567458524759Glutaredoxin
21115Isocitrate lyase family
2243223322227Serine hydroxymethyltransferase
71311214596967Iron-containing alcohol dehydrogenase
3232334112226Ribosomal protein L10
5485349156454KOW motif
11114Ribosomal protein L34
11114Ribosomal protein L33
4333114RF-1 domain
5324113112326Sodium:solute symporter family
112111111111Imidazoleglycerol-phosphate dehydratase
1113DNA polymerase family A
3242117332230IMP dehydrogenase / GMP reductase domain
21126Glucose-6-phosphate dehydrogenase, NAD binding domain
101311106821581213117Protein phosphatase 2C
2466565423447Nucleotidyl transferase
226653222232Carbonic anhydrase
123432221323Phosphoribulokinase / Uridine kinase family
26179961Fatty acid desaturase
3367664333347MutS domain V
14117Delta-aminolevulinic acid dehydratase
1122111111214Arginase family
8898969968888MCM P-loop domain
1145222111121Squalene/phytoene synthase
296111240Bacterial extracellular solute-binding proteins, family 3
161615161615255111618169FHA domain
11NADH-ubiquinone/plastoquinone oxidoreductase chain 6
722538332823472251121441658AMP-binding enzyme
9123430177181010811166G-protein alpha subunit
8122121892417111115157HMG (high mobility group) box
11Cytochrome c oxidase subunit III
21256292111151His Kinase A (phospho-acceptor) domain
1110966520169139114Armadillo/beta-catenin-like repeat
5236322222207161406538459Tetratricopeptide repeat
11Retroviral envelope protein
12241919742317112013169Ion transport protein
111112211112DNA gyrase/topoisomerase IV, subunit A
11Dictyostelium (slime mold) repeat
14155466215131515119BRCA1 C Terminus (BRCT) domain
8813137811678796Glycosyl transferases group 1
1268522246951392Glycosyl transferase family 2
441210723423455SAM domain (Sterile alpha motif)
211323112218linker histone H1 and H5 family
12115Ribosomal protein L7/L12 C-terminal domain
42131141491691Pectate lyase
11ribonuclease
11114Urease, gamma subunit
2346335333338CoA-ligase
4781133112613074622341Phosphopantetheine attachment site
2233232222225Formyl transferase
112Cellulose binding domain
7813121110109678101Metallopeptidase family M24
25524087795073173431872332072,005Leucine Rich Repeat
17391169372029125158alpha/beta hydrolase fold
74463324761227103RNA polymerase Rpb2, domain 6
461213466534568PB1 domain
111132131115Staphylococcal nuclease homologue
1622211918162213111623197Rab-GTPase-TBC domain
121111111212Tudor domain
221114112217WH1 domain
661011558516568Zinc finger, ZZ type
2323111511323HRDC domain
1092124141220118108147CBS domain
113423211119Ribosomal protein L13
112312211115Ribosomal protein L4/L1 family
11221121112Clp protease
3375535524345S1 RNA binding domain
21115HIUase/Transthyretin family
874423AhpC/TSA family
2344442432234tRNA synthetases class I (W and Y)
11226UvrD/REP helicase N-terminal domain
46121288532666Rhodanese-like domain
2228191053211174Universal stress protein family
4223263218234117302924305Acetyltransferase (GNAT) family
112111111111SecE/Sec61-gamma subunits of protein translocation complex
1122212111115C-terminal regulatory domain of Threonine dehydratase
2332323222226AIR synthase related protein, N-terminal domain
7578779856574tRNA synthetase class II core domain (G, H, P, S and T)
112221111113SpoU rRNA Methylase family
115423211121Tetrapyrrole (Corrin/Porphyrin) Methylases
111221211113Glycosyl transferase family, a/b domain
2215Class II Aldolase and Adducin N-terminal domain
1142111112Diacylglycerol kinase accessory domain
54533411655556Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
81210779134441088Fes/CIP4, and EFC/F-BAR homology domain
1911191913102621162214190IQ calmodulin-binding motif
2223224312225Phosphoinositide 3-kinase family, accessory domain (PIK domain)
11215Phospholipase D Active site motif
5379122112612341149Regulator of G protein signaling domain
109777717149109106GTPase-activator protein for Ras-like GTPase
1617131514162715101616175RasGEF domain
14146