PFAM Domains • Apiospora montagnei NRRL 25634 v1.0
Annotations/GenomesApimo1Chagl_1Crypa2Maggr1Neucr1Neudi1Neute_matA2Neute_mat_a1Spoth2Thite2TotalAnnotation Description
PFAMs
10,5737,8658,5018,2017,1855,6156,8276,8596,9517,33775,914
211157 transmembrane receptor (rhodopsin family)
73465552423441404143467ATPase family associated with various cellular activities (AAA)
56424450353434343836403ABC transporter
444444444440ATP synthase alpha/beta family, nucleotide-binding domain
14141413151314141414139Elongation factor Tu GTP binding domain
1411109151414131313126Helix-loop-helix DNA-binding domain
232332333327Hsp20/alpha crystallin family
898787779878Hsp70 protein
1089999998989KH domain
1111111119SH2 domain
24232023212322222123222SH3 domain
1091091079991092Actin
131987762494042462941615Ankyrin repeat
714111116PAN domain
787787777772ADP-ribosylation factor family
27182719171717171622197Eukaryotic aspartyl protease
434444444439Cyclic nucleotide-binding domain
11Cytochrome b(C-terminal)/b6/petD
11Cytochrome b/b6/petB
111111111110Cytochrome c
1113Double-stranded RNA binding motif
17171718182116151720176EF hand
1112311111134Fe-4S binding domain
232233332225Fibronectin type III domain
222122222118Globin
201010764768987Glutathione S-transferase, C-terminal domain
111111111110Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
765765665659Homeodomain
232343334330lactate/malate dehydrogenase, NAD binding domain
11Low-density lipoprotein receptor repeat class B
454554445444Myosin head (motor domain)
23183116128414141415259833Cytochrome P450
120117116108103931011001171341,109Protein kinase domain
26161612121110101213138Pyridine nucleotide-disulphide oxidoreductase
27232826252424252424250Ras family
22121413141414141111139Response regulator receiver domain
933221333130RNase H
63614859666261605862600RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
112Retroviral aspartyl protease
2107114115Reverse transcriptase (RNA-dependent DNA polymerase)
332122221321Copper/zinc superoxide dismutase (SODC)
321222222220Iron/manganese superoxide dismutases, alpha-hairpin domain
321310266788810128Subtilase family
87477964385840404242537Sugar (and other) transporter
141114911910101112111Thioredoxin
211411111114Trypsin
534454444441Tubulin/FtsZ family, GTPase domain
252253552233von Willebrand factor type A domain
78515054527455545360581Zinc finger, C2H2 type
48323640383540404140390Zinc finger, C3HC4 type (RING finger)
11474712565137117Zinc knuckle
222222232221Protein-tyrosine phosphatase
1918413296585354545694872short chain dehydrogenase
81517555293227273242451Zinc-binding dehydrogenase
555556555551Thiolase, N-terminal domain
5429373399991819226Beta-ketoacyl synthase, N-terminal domain
6544655555502Fe-2S iron-sulfur cluster binding domain
11114Papain family cysteine protease
111132221115Enolase, C-terminal TIM barrel domain
279Cytochrome C and Quinol oxidase polypeptide I
11Cytochrome C oxidase subunit II, periplasmic domain
9978109999887Glutamine amidotransferase class-I
10101010101010101010100TCP-1/cpn60 chaperonin family
343354444438Glutamine synthetase, catalytic domain
222222222220Triosephosphate isomerase
20131419131313131412144E1-E2 ATPase
878887778977Core histone H2A/H2B/H3/H4
87118109998483Alpha amylase, catalytic domain
221221212217Phorbol esters/diacylglycerol binding domain (C1 domain)
789998998783Bacterial transferase hexapeptide (six repeats)
354437333439tRNA synthetases class I (I, L, M and V)
757658555760Cyclin, N-terminal domain
341833209999914164Carboxylesterase family
444444444440DNA polymerase family B
654644335545ATP synthase subunit C
936743334446Peroxidase
131110962665674Beta-lactamase
423422223327C-5 cytosine-specific DNA methylase
30243123272526262429265Calcineurin-like phosphoesterase
188129545581387Cellulase (glycosyl hydrolase family 5)
777777777871tRNA synthetases class II (D, K and N)
40363738373536363735367Mitochondrial carrier protein
1813171613911121212133Aminotransferase class I and II
11999888881088Phosphoribosyl transferase domain
10101010111010101010101Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
111111111110Phosphoglycerate kinase
222221222219Ribosomal protein S4/S9 N-terminal domain
22223221218Ribosomal protein S12/S23
112Bacterial regulatory helix-turn-helix proteins, AraC family
111111111110Chaperonin 10 Kd subunit
16131016121212121311127C2 domain
19141916181817181715171PH domain
13771177778983bZIP transcription factor
21121918141313131315151Aldehyde dehydrogenase family
23610616610899981001031011221,239Fungal Zn(2)-Cys(6) binuclear cluster domain
29182022212121212122216Cytochrome b5-like Heme/Steroid binding domain
42333332225Oxidoreductase molybdopterin binding domain
20141819151415151314157Oxidoreductase NAD-binding domain
34292924252324242326261SNF2 family N-terminal domain
221222222219Ribosomal protein S7p/S5e
23202019201719192020197Ubiquitin-conjugating enzyme
668755555557Isocitrate/isopropylmalate dehydrogenase
22222222218Ribosomal Proteins L2, RNA binding domain
111111111110Hsp90 protein
222222222220Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
111111111110Dihydrofolate reductase
4721321222338Chitin recognition protein
413633331128Cysteine-rich secretory protein family
111111111110Ribosomal protein S3, C-terminal domain
333211112118Cupin
231222223221Annexin
11121111110Eukaryotic-type carbonic anhydrase
211211111112Chalcone and stilbene synthases, N-terminal domain
3333333333302-oxoacid dehydrogenases acyltransferase (catalytic domain)
334233332127Catalase
111211111111Disintegrin
311511113UDP-glucoronosyl and UDP-glucosyl transferase
978676556766Aminotransferase class-III
222222222220Ribosomal protein S19
111111111110DNA gyrase B
556454444344Thiamine pyrophosphate enzyme, central domain
423333333330Lyase
222222222220Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
134Sodium:neurotransmitter symporter family
111111111110Adenylate and Guanylate cyclase catalytic domain
111111111110ATP synthase delta (OSCP) subunit
411111111113Orotidine 5'-phosphate decarboxylase / HUMPS family
111111111110Indole-3-glycerol phosphate synthase
21111111110Aromatic amino acid lyase
111121112112Pyruvate kinase, barrel domain
1311910101010101010103Kinesin motor domain
28252426282526272426259DnaJ domain
14131414151212121314133Proteasome subunit
1116611111130Major intrinsic protein
111111111110ATP synthase
213211111114Glycosyl hydrolase family 1
1111111111103'5'-cyclic nucleotide phosphodiesterase
111121221113Profilin
11111117Ribosomal protein L22p/L17e
222221222219Ribosomal protein L14p/L23e
1010111012101010118102Ubiquitin family
534563443441Cofilin/tropomyosin-type actin-binding protein
22222222222014-3-3 protein
552655554244Alkaline phosphatase
5311122223233Zinc carboxypeptidase
36184423181718181423229Aldo/keto reductase family
18171115171717171716162Myb-like DNA-binding domain
443434334436Forkhead domain
33152211119Glycosyl hydrolases family 32 N-terminal domain
111111111110Ribosomal protein L16p/L10e
22222122217Ribosomal protein S14p/S29e
332344444435FKBP-type peptidyl-prolyl cis-trans isomerase
111111111110Glutathione peroxidase
211222222218
969966666669Flavodoxin
111111111110Calreticulin family
39145148577910118Common central domain of tyrosinase
977783888772Aminotransferase class-V
111111111110Ribonucleotide reductase, small chain
41463841404740413938411DEAD/DEAH box helicase
82857776757169707273750Helicase conserved C-terminal domain
111111111110EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
222222222220Ribosomal protein L23
211111112112Pyridoxal-dependent decarboxylase, C-terminal sheet domain
221222222219Ribosomal protein L5
657566665557Pyridoxal-dependent decarboxylase conserved domain
624242222228Citrate synthase, C-terminal domain
555565566553GHMP kinases N terminal domain
846655555554Biotin carboxylase, N-terminal domain
111111111110Tryptophan synthase alpha chain
11910121191010108100Pyridoxal-phosphate dependent enzyme
20131514171517171314155NUDIX domain
675563456552pfkB family carbohydrate kinase
5121322222747Glycosyl hydrolases family 28
1111222111Luciferase-like monooxygenase
222222122219Ribosomal protein L3
222222222220Ribosomal protein L11, RNA binding domain
1913111110710101112114Histidine phosphatase superfamily (branch 1)
22Chloramphenicol acetyltransferase
111111111110Thymidylate synthase
211111112112Lipoxygenase
444444444440ATP synthase alpha/beta chain, C terminal domain
545555555549Calponin homology (CH) domain
655544444445Glutamine amidotransferases class-II
222221112116Ribosomal protein S15
21111118Thaumatin family
222222221118Fructose-1-6-bisphosphatase, N-terminal domain
111111111110Ribonucleotide reductase, all-alpha domain
222222122219Ribosomal protein S2
222222222220SRF-type transcription factor (DNA-binding and dimerisation domain)
1145966666867GATA zinc finger
50183829202020201921255Amino acid permease
745621223234Prolyl oligopeptidase family
212222222219Ribosomal protein L30p/L7e
11591265666470Histidine phosphatase superfamily (branch 2)
111111111110Respiratory-chain NADH dehydrogenase, 30 Kd subunit
565544444445Aconitase family (aconitate hydratase)
974644444652Glycosyl hydrolase family 10
314241332225Glycosyl hydrolases family 17
222222222220Ribosomal protein S5, N-terminal domain
111111111110Nucleoside diphosphate kinase
122112111113Ribosomal protein S10p/S20e
434543444439Arrestin (or S-antigen), N-terminal domain
111111111110Phosphoglucose isomerase
111111111110Carbohydrate phosphorylase
111111111110SecY translocase
111111111110Respiratory-chain NADH dehydrogenase, 49 Kd subunit
222221111216Ribosomal protein L6
643933334442Polyprenyl synthetase
744454444444Hexokinase
12971177668881Dynamin family
121111112213Transcription factor TFIID (or TATA-binding protein, TBP)
534544444441Rieske [2Fe-2S] domain
1113Phytochrome region
3328Proton-conducting membrane transporter
1078877777674Biotin-requiring enzyme
111111111110Phosphofructokinase
122221222218Ribosomal protein S17
111111111110Hydroxymethylglutaryl-coenzyme A reductase
333433333331FGGY family of carbohydrate kinases, N-terminal domain
1113Sodium:dicarboxylate symporter family
11713877778782Enoyl-CoA hydratase/isomerase
222222222220Ribosomal protein S9/S16
322232222222Transcription factor TFIIB repeat
1269777668674Cytidine and deoxycytidylate deaminase zinc-binding region
121211111213Molybdopterin oxidoreductase
82861194677793Chromo (CHRromatin Organisation MOdifier) domain
745544443343Phosphatidylinositol-specific phospholipase C, Y domain
846555443347Phosphatidylinositol-specific phospholipase C, X domain
10611865556769D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
222222222220Malic enzyme, N-terminal domain
1113PEP-utilising enzyme, mobile domain
2121222212176-phosphogluconate dehydrogenase, C-terminal domain
178161610101010611114Multicopper oxidase
11Granulin
1096998889985WW domain
111111111110Ribosomal RNA adenine dimethylase
1111116Yeast PIR protein repeat
1051131041041031001041061061081,053WD domain, G-beta repeat
644554444545Heavy-metal-associated domain
533344443437Adenylate kinase
111212112113Phosphoglucomutase/phosphomannomutase, C-terminal domain
221222222118Ribosomal protein S8
211211111213Ribosomal protein S11
444444444440LIM domain
22232222320Regulator of chromosome condensation (RCC1) repeat
2222211214Ribosomal protein S13/S18
11NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
322233332225chorismate binding enzyme
33334333333160s Acidic ribosomal protein
854544444446Prenyltransferase and squalene oxidase repeat
666763656556Protein kinase C terminal domain
111121111111Single-strand binding protein family
111111111110S-adenosylmethionine synthetase, N-terminal domain
1088877777877Bromodomain
12814888887889Acyl-CoA dehydrogenase, C-terminal domain
15141314141514141414141Ubiquitin carboxyl-terminal hydrolase
11111117Ribosomal protein L36
4321111114Ribonuclease T2 family
323333333329HSF-type DNA-binding
222222222220SRP54-type protein, GTPase domain
111111111110Urease alpha-subunit, N-terminal domain
15611644445564Serine carboxypeptidase
11Apoptosis regulator proteins, Bcl-2 family
888888889881Phosphatidylinositol 3- and 4-kinase
213211111114Transketolase, thiamine diphosphate binding domain
794522228546Glycosyl hydrolases family 11
554355556548Inositol monophosphatase family
443443443336Glutaredoxin
623232332228Isocitrate lyase family
232222222221Serine hydroxymethyltransferase
213111111113Iron-containing alcohol dehydrogenase
212232222220Ribosomal protein L10
333544443235KOW motif
1111116Ribosomal protein L34
313231222322RF-1 domain
315322223326Sodium:solute symporter family
111111111110Imidazoleglycerol-phosphate dehydratase
111111111110DNA polymerase family A
111111111110IMP dehydrogenase / GMP reductase domain
111111111110Glucose-6-phosphate dehydrogenase, NAD binding domain
966555556557Protein phosphatase 2C
222222222220Nucleotidyl transferase
332432333430Carbonic anhydrase
111111111110Phosphoribulokinase / Uridine kinase family
1066555555557Fatty acid desaturase
666666666660MutS domain V
111111111110Delta-aminolevulinic acid dehydratase
414444441131Arginase family
666666666660MCM P-loop domain
212122221116Squalene/phytoene synthase
11Bacterial extracellular solute-binding proteins, family 3
8989888881084FHA domain
112NADH-ubiquinone/plastoquinone oxidoreductase chain 6
70454748272527283127375AMP-binding enzyme
533333333433G-protein alpha subunit
10117101210101010999HMG (high mobility group) box
11NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
11Cytochrome c oxidase subunit III
17811101111111188106His Kinase A (phospho-acceptor) domain
222233333326Armadillo/beta-catenin-like repeat
21272327232220212124229Tetratricopeptide repeat
224232332427Ion transport protein
111111111110DNA gyrase/topoisomerase IV, subunit A
138810987810788BRCA1 C Terminus (BRCT) domain
688697997675Glycosyl transferases group 1
333244443333Glycosyl transferase family 2
11115111214SAM domain (Sterile alpha motif)
111121111111linker histone H1 and H5 family
111111111110Ribosomal protein L7/L12 C-terminal domain
26321111522Pectate lyase
521221112118ribonuclease
111111111110Urease, gamma subunit
445444444340CoA-ligase
5225302787881617198Phosphopantetheine attachment site
334233333229Formyl transferase
1089886778879Metallopeptidase family M24
14111213141414131615136Leucine Rich Repeat
51264140231422212526289alpha/beta hydrolase fold
333333333330RNA polymerase Rpb2, domain 6
444444444440PB1 domain
222222222220Staphylococcal nuclease homologue
10999109101091095Rab-GTPase-TBC domain
111111111110Tudor domain
1111111119WH1 domain
414433333331Zinc finger, ZZ type
212211222217HRDC domain
9791098998987CBS domain
222222221219Ribosomal protein L13
222222222220Ribosomal protein L4/L1 family
111111111110Clp protease
421553553336S1 RNA binding domain
111111111110HIUase/Transthyretin family
424323222226AhpC/TSA family
444444444440tRNA synthetases class I (W and Y)
1112117UvrD/REP helicase N-terminal domain
544544445645Rhodanese-like domain
222221222219Universal stress protein family
55224333272025242831308Acetyltransferase (GNAT) family
111111111110SecE/Sec61-gamma subunits of protein translocation complex
111121111111C-terminal regulatory domain of Threonine dehydratase
222222222220AIR synthase related protein, N-terminal domain
8988888881083tRNA synthetase class II core domain (G, H, P, S and T)
111111111110SpoU rRNA Methylase family
11Phage integrase family
222222222220Tetrapyrrole (Corrin/Porphyrin) Methylases
111111118Glycosyl transferase family, a/b domain
112116PDZ domain
615522222229Class II Aldolase and Adducin N-terminal domain
443444444439Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
544444444542Fes/CIP4, and EFC/F-BAR homology domain
554555445446IQ calmodulin-binding motif
222222222220Phosphoinositide 3-kinase family, accessory domain (PIK domain)
655665666657Phospholipase D Active site motif
112111111111Regulator of G protein signaling domain
444444334438GTPase-activator protein for Ras-like GTPase
444444444440RasGEF domain
444443444439RasGEF N-terminal motif
9109810101010101096RhoGAP domain
654666666657RhoGEF domain
333333333532SPRY domain
333333333330RNA polymerase Rpb1, domain 2
22222223219Guanylate kinase
554544443442Gelsolin repeat
7858967711977UBA/TS-N domain
17141115171415151615149PHD-finger
111111111110GGL domain
666666666559HECT-domain (ubiquitin-transferase)
221122113217Helix-hairpin-helix motif
111111111110MSP (Major sperm protein) domain
534643445442Ribonuclease III domain
22