The Scaffold Info page offers basic information about the scaffold you are browsing and allows you to view specific sequences. The table shows the following information for each sequence or gap:
- Sequence An identifier for the sequence, such as a scaffold or contig number; a link to view its sequence with theScaffold Sequence Viewer.
- Start The number of the first base in the scaffold, contig, or gap.
- End The number of the last base in the scaffold, contig, or gap.
- Length The length in base pairs of the scaffold, contig, or gap.
Quick Tip
- To view a specific section of the scaffold with the Scaffold Sequence Viewer, enter the desired start and end points in theStart andEnd text boxes, and clickGet Sequence.
- To view the sequence of a different scaffold, change the scaffold number in the Sequence text box and clickGet Sequence. From the Scaffold Sequence viewer for the new scaffold, you can click the scaffoldnumber to go to its Scaffold Info page.