1000 Fungal Genomes

This project aims to provide genomic information for every family of fungi. The list below includes sequenced fungal genomes, those in progress, and selected nominations. You can log in and nominate new species for genome sequencing in the families with no (green) or only one (yellow) reference genome if you can provide DNA/RNA samples for their sequencing (see JGI User Guidelines). If you know additional fungal species being sequenced somewhere but not reflected on this list, please register these projects in GOLD (use Add to GOLD link) or let us know.
Phylum Subphylum Class Order Family
Found 76 families, 16 genome project(s), 7 nomination(s).
Show families with
The species that have been nominated for sequencing by community are marked with asterisk.

Phylum name
Subphylum name
Class name
Order name
Family name
Genome Projects
AscomycotaPezizomycotinaLecanoromycetesAcarosporalesAcarosporaceae
Acarospora strigata WGS
AscomycotaPezizomycotinaLecanoromycetesAgyrialesAgyriaceae
* Sarea difformis nominated Jon Magnuson, Pacific Northwest National Laboratory
AscomycotaPezizomycotinaLecanoromycetesAgyrialesAnamylopsoraceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesAgyrialesSchaereriaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesAgyrialesTrapeliaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesBaeomycetalesBaeomycetaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesCandelarialesCandelariaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesIncertae sedisArthrorhaphidaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesIncertae sedisConiocybaceae
* Sclerophora sanguinea WGS Jon Magnuson, Pacific Northwest National Laboratory
AscomycotaPezizomycotinaLecanoromycetesIncertae sedisPachyascaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesIncertae sedisThelocarpaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecanoralesAphanopsidaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecanoralesArctomiaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecanoralesBiatorellaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecanoralesBrigantiaeaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecanoralesCalycidiaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecanoralesCladoniaceae
Cladonia grayi Daniele Armaleo, Duke University
Cladonia macilenta WGS
Cladonia metacorallifera WGS
AscomycotaPezizomycotinaLecanoromycetesLecanoralesCrocyniaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecanoralesDactylosporaceae
* Dactylospora haliotrepha WGS Jon Magnuson, Pacific Northwest National Laboratory
AscomycotaPezizomycotinaLecanoromycetesLecanoralesEctolechiaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecanoralesGypsoplacaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecanoralesHaematommataceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecanoralesHymeneliaceae
* Ionaspis alba WGS Jon Magnuson, Pacific Northwest National Laboratory
AscomycotaPezizomycotinaLecanoromycetesLecanoralesLecanoraceae
Rhizoplaca melanophthalma nominated Steve Leavitt, university of chicago
AscomycotaPezizomycotinaLecanoromycetesLecanoralesMegalariaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecanoralesMiltideaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecanoralesMycoblastaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecanoralesParmeliaceae
* Cetraria ilandica nominated Jon Magnuson, Pacific Northwest National Laboratory
* Usnea florida WGS Jon Magnuson, Pacific Northwest National Laboratory
AscomycotaPezizomycotinaLecanoromycetesLecanoralesPilocarpaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecanoralesPsoraceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecanoralesRamalinaceae
Ramalina peruviana WGS
AscomycotaPezizomycotinaLecanoromycetesLecanoralesSarrameanaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecanoralesSphaerophoraceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecanoralesStereocaulaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecanoralesTephromelataceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecanoralesVezdaeaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecidealesLecideaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesLecidealesPorpidiaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesOstropalesAsterothyriaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesOstropalesCoenogoniaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesOstropalesGomphillaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesOstropalesGraphidaceae
Graphis scripta WGS
AscomycotaPezizomycotinaLecanoromycetesOstropalesGyalectaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesOstropalesMyeloconidiaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesOstropalesOdontotremataceae
* Claviradulomyces xylopiae WGS Jon Magnuson, Pacific Northwest National Laboratory
AscomycotaPezizomycotinaLecanoromycetesOstropalesPhlyctidaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesOstropalesPorinaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesOstropalesStictidaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesOstropalesThelotremataceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesPeltigeralesCoccocarpiaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesPeltigeralesCollemataceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesPeltigeralesLobariaceae
Lobaria pulmonaria WGS Silke Werth, University of Graz
AscomycotaPezizomycotinaLecanoromycetesPeltigeralesMassalongiaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesPeltigeralesNephromataceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesPeltigeralesPannariaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesPeltigeralesPeltigeraceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesPeltigeralesPlacynthiaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesPertusarialesCoccotremataceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesPertusarialesIcmadophilaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesPertusarialesMegasporaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesPertusarialesOchrolechiaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesPertusarialesPertusariaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesRhizocarpalesCatillariaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesRhizocarpalesRhizocarpaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesTeloschistalesCaliciaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesTeloschistalesLetrouitiaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesTeloschistalesMegalosporaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesTeloschistalesMicrocaliciaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesTeloschistalesPhysciaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesTeloschistalesRopalosporaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesTeloschistalesTeloschistaceae
Gyalolechia flavorubescens WGS
Xanthoria parietina WGS Paul Dyer, University of Nottingham
AscomycotaPezizomycotinaLecanoromycetesUmbilicarialesElixiaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesUmbilicarialesFuscideaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesUmbilicarialesOphioparmaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesUmbilicarialesRhizoplacopsidaceae
None sequenced
AscomycotaPezizomycotinaLecanoromycetesUmbilicarialesUmbilicariaceae
Umbilicaria muehlenbergii WGS
Umbilicaria pustulata WGS