1000 Fungal Genomes

This project aims to provide genomic information for every family of fungi. The list below includes sequenced fungal genomes, those in progress, and selected nominations. You can log in and nominate new species for genome sequencing in the families with no (green) or only one (yellow) reference genome if you can provide DNA/RNA samples for their sequencing (see JGI User Guidelines). If you know additional fungal species being sequenced somewhere but not reflected on this list, please register these projects in GOLD (use Add to GOLD link) or let us know.
Phylum Subphylum Class Order Family
Found 19 families, 41 genome project(s), 29 nomination(s).
Show families with
The species that have been nominated for sequencing by community are marked with asterisk.

Phylum name
Subphylum name
Class name
Order name
Family name
Genome Projects
AscomycotaPezizomycotinaPezizomycetesPezizalesAmplistromataceae
* Acidothrix acidophila WGS Milan Gryndler, Institute of Microbiology ASCR, v.v.i.
AscomycotaPezizomycotinaPezizomycetesPezizalesAscobolaceae
Ascobolus immersus WGS Annegret Kohler, INRA
* Saccobolus dilutellus WGS Jon Magnuson, Pacific Northwest National Laboratory
AscomycotaPezizomycotinaPezizomycetesPezizalesAscodesmidaceae
* Ascodesmis nigricans WGS Minou Nowrousian, Ruhr-University Bochum
* Cephaliophora tropica nominated Jon Magnuson, Pacific Northwest National Laboratory
AscomycotaPezizomycotinaPezizomycetesPezizalesCaloscyphaceae
* Caloscypha fulgens WGS Jon Magnuson, Pacific Northwest National Laboratory
AscomycotaPezizomycotinaPezizomycetesPezizalesCarbomycetaceae
None sequenced
AscomycotaPezizomycotinaPezizomycetesPezizalesChorioactidaceae
* Chorioactis geaster nominated Jon Magnuson, Pacific Northwest National Laboratory
* Pseudosarcosoma latahense WGS
AscomycotaPezizomycotinaPezizomycetesPezizalesDiscinaceae
* Gyromitra esculenta WGS Jon Magnuson, Pacific Northwest National Laboratory
AscomycotaPezizomycotinaPezizomycetesPezizalesGlaziellaceae
* Glaziella nominated Alan Franck, Florida International University
AscomycotaPezizomycotinaPezizomycetesPezizalesHelvellaceae
* Helvella lacunosa WGS Benjamin Stielow, CBS KNAW
AscomycotaPezizomycotinaPezizomycetesPezizalesKarstenellaceae
None sequenced
AscomycotaPezizomycotinaPezizomycetesPezizalesMorchellaceae
* Morchella conica WGS Petr Baldrian, Institute of Microbiology ASCR
Morchella elata
* Morchella esculenta WGS Xi-Hui Du, Kunming Institute of Botany, Chinese Academy of Sciences
Morchella eximia WGS
* Morchella importuna WGS Hao Tan, Soil and Fertilizer Institute, Sichuan Academy of Agricultural Sciences
Morchella sextelata WGS
Morchella snyderi WGS Akiko Carver, JGI
AscomycotaPezizomycotinaPezizomycetesPezizalesPezizaceae
* Kalaharituber pfeilii WGS Yaron Sitrit, Ben-Gurion University of the Negev
* Mattirolomyces terfezioides WGS Benjamin Stielow, CBS KNAW
Peziza aff. WGS
Peziza echinispora WGS Akiko Carver, JGI
Peziza echinospora Transcriptome Akiko Carver, JGI
Peziza quelepidotia
* Tirmania nivea WGS AsunciĆ³n Morte, University of Murcia
AscomycotaPezizomycotinaPezizomycetesPezizalesPyrenomycetaceae
None sequenced
AscomycotaPezizomycotinaPezizomycetesPezizalesPyronemataceae
* Anthracobia macrocystis WGS Akiko Carver, University of California, Berkeley
Geopyxis carbonaria WGS Akiko Carver, JGI
* Phaeangium lefebvrei WGS
Pyronema confluens WGS
Pyronema domesticum WGS Thomas Bruns, University of California, Berkeley
Pyronema omphalodes WGS Thomas Bruns, University of California, Berkeley
* Pyronemadomesticum nominated Jon Magnuson, Pacific Northwest National Laboratory
Tricharina praecox WGS Akiko Carver, JGI
* Trichophaea aff hybrida nominated Francis Martin, Institut National de la Recherche Agronomique (INRA) - Nancy
* Trichophaea hybrida WGS Annegret Kohler, INRA
* Wilcoxina mikolae WGS Thomas Bruns, University of California, Berkeley
AscomycotaPezizomycotinaPezizomycetesPezizalesRhizinaceae
* Rhizina undulata WGS Jon Magnuson, Pacific Northwest National Laboratory
AscomycotaPezizomycotinaPezizomycetesPezizalesSarcoscyphaceae
* Desmazierella acicola WGS Jon Magnuson, Pacific Northwest National Laboratory
* Microstoma floccosum WGS Jon Magnuson, Pacific Northwest National Laboratory
* Sarcoscypha coccinea WGS Jon Magnuson, Pacific Northwest National Laboratory
AscomycotaPezizomycotinaPezizomycetesPezizalesSarcosomataceae
* Plectania melastoma WGS Jon Magnuson, Pacific Northwest National Laboratory
* Sarcosoma latahense nominated Jon Magnuson, Pacific Northwest National Laboratory
AscomycotaPezizomycotinaPezizomycetesPezizalesTerfeziaceae
Terfezia boudieri WGS Kerrie Barry, JGI
* Terfezia claveryi WGS AsunciĆ³n Morte, University of Murcia
AscomycotaPezizomycotinaPezizomycetesPezizalesTuberaceae
Choiromyces venosus WGS Annegret Kohler, INRA
Tuber borchii WGS Annegret Kohler, INRA
Tuber melanosporum WGS Francis Martin, Institut National de la Recherche Agronomique (INRA) - Nancy