Due to the emerging COVID-19 pandemic, JGI will not be accepting or processing any samples because of reduced onsite staffing until further notice.

1000 Fungal Genomes

This project aims to provide genomic information for every family of fungi. The list below includes sequenced fungal genomes, those in progress, and selected nominations. You can log in and nominate new species for genome sequencing in the families with no (green) or only one (yellow) reference genome if you can provide DNA/RNA samples for their sequencing (see JGI User Guidelines). If you know additional fungal species being sequenced somewhere but not reflected on this list, please register these projects in GOLD (use Add to GOLD link) or let us know.
Phylum Subphylum Class Order Family
Found 7 families, 20 genome project(s), 2 nomination(s).
Show families with
The species that have been nominated for sequencing by community are marked with asterisk.

Phylum name
Subphylum name
Class name
Order name
Family name
Genome Projects
* Archaeorhizomyces borealis WGS Leho Tedersoo, University of Tartu
Archaeorhizomyces findlayi
AscomycotaTaphrinomycotinaIncertae sedisIncertae sedisIncertae sedis
Saitoella complicata WGS Thomas W. Jeffries, USDA Forest Products Laboratory
Neolecta irregularis WGS
Pneumocystis carinii WGS
Pneumocystis jirovecii WGS
Pneumocystis murina WGS
Schizosaccharomyces cryophilus WGS
Schizosaccharomyces japonicus WGS
Schizosaccharomyces kambucha WGS
Schizosaccharomyces octosporus WGS
Schizosaccharomyces pombe WGS Katherine McMahon, University of Wisconsin Madison
Schizosaccharomyces sp. NI_23 WGS
Protomyces inouyei
* Protomyces lactucaedebilis WGS Jon Magnuson, Pacific Northwest National Laboratory
Taphrina betulina WGS
Taphrina deformans WGS
Taphrina flavorubra WGS
Taphrina populina WGS
Taphrina wiesneri WGS