Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type

Genome DMAT HYBRID NRPS NRPS-Like PKS PKS-Like TC Total
Acephala macrosclerotiorum EW76-UTF0540 v1.0 1 3 4 11 16 5 1 41
Amanita muscaria Koide v1.0 1 0 0 2 3 0 10 16
Amanita rubescens Přilba v1.0 1 0 0 2 3 0 5 11
Boletus edulis BED1 v4.0 0 1 0 9 2 0 8 20
Boletus edulis Přilba v1.0 0 1 0 7 1 1 8 18
Cantharellus anzutake C23 v1.0 0 0 1 5 1 0 0 7
Cenococcum geophilum 1.58 v2.0 3 2 8 6 9 4 1 33
Ceratobasidium sp. (anastomosis group I, AG-I) v1.0 0 0 1 9 1 0 2 13
Choiromyces venosus 120613-1 v1.0 0 0 1 2 2 2 0 7
Clavulina sp. PMI_390 v1.0 0 0 0 6 1 0 1 8
Cortinarius aff. campbellae TAS5-PSC4363 v1.0 0 1 0 1 7 2 22 33
Cortinarius austrovenetus TL2843-KIS7R v1.0 0 2 0 2 8 0 17 29
Cortinarius glaucopus AT 2004 276 v2.0 0 1 0 6 7 1 18 33
Gautieria morchelliformis GMNE.BST v1.0 7 0 2 15 4 0 17 45
Geopyxis carbonaria DOB1671 v1.0 0 0 3 5 7 2 1 18
Gigaspora rosea v1.0 0 5 1 8 0 3 2 19
Gyrodon lividus BX v1.0 0 2 2 9 4 0 5 22
Hebeloma cylindrosporum h7 v2.0 0 0 1 6 3 0 10 20
Hydnum rufescens UP504 v2.0 0 0 1 2 1 0 0 4
Hysterangium stoloniferum HS.BST v1.0 2 1 0 8 4 2 18 35
Kalaharituber pfeilii F3 v1.0 0 1 1 1 3 2 2 10
Kurtia argillacea OMC1749 v1.0 0 0 5 2 2 1 7 17
Laccaria amethystina LaAM-08-1 v2.0 1 0 0 2 3 2 7 15
Laccaria bicolor v2.0 1 0 0 4 3 1 8 17
Lactarius akahatsu QP v1.0 0 0 0 2 2 0 16 20
Lactarius deliciosus 48 v1.0 0 0 0 2 2 0 18 22
Lactarius hatsudake 109 v1.0 0 0 0 2 2 0 14 18
Lactarius hengduanensis 84 v1.0 0 0 0 2 2 0 11 15
Lactarius psammicola BPL869 v1.0 0 0 0 2 2 0 12 16
Lactarius pseudohatsudake 88 v1.0 0 0 0 2 2 0 20 24
Lactarius quietus S23C v1.0 0 0 0 2 2 0 9 13
Lactarius sanguifluus B21 v1.0 0 0 0 3 2 0 13 18
Lactarius vividus 141 v1.0 0 0 0 2 2 0 12 16
Lactifluus subvellereus BPL653 v1.0 0 0 0 2 2 0 6 10
Lactifluus volemus BPL652 v1.0 0 0 0 2 2 0 7 11
Melanogaster broomeianus MBLB.BST v1.0 0 2 1 10 9 3 8 33
Meliniomyces bicolor E v2.0 2 1 6 12 23 2 1 47
Meliniomyces sp. PMI_1271 v1.0 1 2 5 10 20 2 1 41
Meliniomyces variabilis F v1.0 1 0 4 14 17 2 1 39
Morchella importuna CCBAS932 v1.0 0 0 1 6 0 2 1 10
Multifurca ochricompacta BPL690 v1.0 0 0 0 2 2 0 21 25
Oidiodendron maius Zn v1.0 2 4 5 14 34 4 2 65
Paxillus adelphus Ve08.2h10 v2.0 0 2 1 6 2 0 5 16
Paxillus ammoniavirescens Pou09.2 v1.0 0 2 1 12 4 0 4 23
Paxillus involutus ATCC 200175 v1.0 0 0 2 13 5 3 6 29
Piloderma croceum F 1598 v1.0 3 0 1 12 6 1 5 28
Pisolithus albus SI12 v1.0 0 1 1 8 1 0 6 17
Pisolithus croceorrhizus ssp. 2 72 v1.0 0 2 1 8 1 0 7 19
Pisolithus croceorrhizus subspA 74A v1.0 0 3 1 10 0 0 7 21
Pisolithus marmoratus ssp. 2 16A v1.0 0 1 2 11 1 0 11 26
Pisolithus microcarpus 441 v1.0 0 1 1 7 1 0 7 17
Pisolithus sp. B1 v1.0 0 1 1 7 1 0 5 15
Pisolithus thermaeus 11 v1.0 0 3 1 8 1 0 8 21
Pisolithus tinctorius Marx 270 v1.0 0 0 1 5 2 0 8 16
Rhizophagus cerebriforme DAOM 227022 v1.0 0 0 1 1 0 1 0 3
Rhizophagus diaphanus v1.0 0 0 1 0 0 1 0 2
Rhizophagus irregularis A1 v1.0 0 0 1 1 0 2 0 4
Rhizophagus irregularis A4 v1.0 0 0 1 0 0 2 0 3
Rhizophagus irregularis A5 v1.0 0 0 1 0 0 1 0 2
Rhizophagus irregularis B3 v1.0 0 0 1 0 0 2 0 3
Rhizophagus irregularis C2 v1.0 0 0 1 1 0 2 0 4
Rhizophagus irregularis DAOM 181602 v1.0 0 0 1 0 0 1 0 2
Rhizophagus irregularis DAOM 197198 v2.0 0 0 1 1 0 1 0 3
Rhizopogon salebrosus TDB-379 v1.0 0 0 0 7 2 0 14 23
Rhizopogon truncatus FC74 v1.0 0 0 0 21 2 0 12 35
Rhizopogon vesiculosus Smith 0 0 1 9 3 0 11 24
Rhizopogon vinicolor AM-OR11-026 v1.0 0 0 1 20 2 0 13 36
Rhizopogon vulgaris FC72 v1.0 0 0 1 9 1 0 8 19
Rhizoscyphus ericae UAMH 7357 v1.0 1 1 2 8 10 2 2 26
Russula brevipes BPL707 v1.0 0 0 0 2 2 0 8 12
Russula compacta BPL669 v1.0 0 0 1 2 2 0 9 14
Russula dissimulans BPL704 v1.0 0 0 0 2 1 1 5 9
Russula earlei BPL698 v1.0 0 0 0 2 2 1 7 12
Russula emetica Přilba v1.0 0 0 0 3 2 0 6 11
Russula ochroleuca Přilba v1.0 0 0 0 2 2 0 6 10
Russula rugulosa BPL654 v1.0 0 0 0 2 1 0 7 10
Russula seminuda PSC4341-TAS1 v1.0 0 0 0 4 2 0 5 11
Russula vinacea BPL710 v1.0 0 0 0 3 2 0 6 11
Scleroderma citrinum Foug A v1.0 0 1 0 7 1 0 5 14
Sebacina vermifera MAFF 305830 v1.0 0 0 0 1 1 0 1 3
Serendipita sp. 407 v1.0 0 0 0 1 1 0 1 3
Serendipita vermifera ssp. bescii NFPB0129 v1.0 0 0 0 1 1 0 1 3
Sphaerosporella brunnea Sb_GMNB300 v2.0 1 1 3 3 1 2 3 14
Suillus "subluteus" FC464 v1.0 0 0 1 18 3 0 29 51
Suillus americanus EM31 v1.0 0 0 1 9 3 0 22 35
Suillus ampliporus FC55 v1.0 0 0 1 15 2 0 16 34
Suillus bovinus UH-Sbo-P2 v1.0 0 0 1 12 3 0 12 28
Suillus brevipes Sb2 v2.0 0 0 1 10 3 0 11 25
Suillus clintonianus FC179 v1.0 0 0 1 18 8 0 16 43
Suillus cothurnatus VC 1858 v1.0 0 0 1 12 3 0 27 43
Suillus decipiens EM49 v1.0 0 0 1 15 3 0 12 31
Suillus discolor FC423 v1.0 0 0 1 19 3 0 20 43
Suillus fuscotomentosus FC203 v1.0 0 0 1 15 3 0 23 42
Suillus granulatus EM37 v1.0 0 0 1 10 4 0 17 32
Suillus hirtellus EM16 v1.0 0 0 1 16 3 0 22 42
Suillus lakei FC43 v1.0 0 0 1 16 4 0 21 42
Suillus luteus UH-Slu-Lm8-n1 v3.0 0 0 1 8 3 0 8 20
Suillus occidentalis FC124 v1.0 0 0 1 8 3 0 10 22
Suillus paluster FC165 v1.0 0 0 1 9 3 0 8 21
Suillus pictus EM44 v1.0 0 0 1 18 3 0 11 33
Suillus placidus DOB743 v1.0 0 0 1 11 5 0 15 32
Suillus subalutaceus FC151 v1.0 0 0 1 16 3 0 30 50
Suillus subaureus MN1 v1.0 0 0 1 15 2 1 16 35
Suillus tomentosus FC115 v1.0 0 0 1 16 3 0 23 43
Suillus variegatus UH-Sva-Z1 v1.0 0 0 1 15 2 0 24 42
Terfezia boudieri ATCC MYA-4762 v1.1 0 0 1 1 3 2 0 7
Terfezia claveryi T7 v1.0 0 0 1 1 3 2 0 7
Thelephora ganbajun P2 v1.0 1 1 2 6 5 0 7 22
Thelephora terrestris UH-Tt-Lm1 v1.0 1 2 2 6 3 0 8 22
Tirmania nivea G3 v1.0 0 0 1 2 3 2 0 8
Tricholoma matsutake 945 v3.0 0 0 0 10 2 0 7 19
Trichophaea hybrida UTF0779 v1.0 1 1 1 3 0 2 1 9
Tuber aestivum var. urcinatum v1.0 0 0 1 5 1 3 0 10
Tuber borchii Tbo3840 v1.0 0 0 1 3 1 2 0 7
Tuber magnatum v1.0 0
Tuber melanosporum Mel28 v1.2 0 0 1 3 2 2 0 8
Tulasnella calospora AL13/4D v1.0 0 0 0 2 1 0 7 10
Tulasnella calospora UAMH 9824 v1.0 0 0 0 2 1 0 5 8
Wilcoxina mikolae CBS 423.85 v1.0 0 1 1 2 4 2 1 11
Xerocomus badius 84.06 v1.0 0 1 0 13 2 0 12 28
Total 31 54 119 801 391 84 993 2473