Due to a planned NERSC power outage, JGI portals will be unavailable 6:00am PDT July 10 - 11:59pm PDT July 14. System Status updates available here.
Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 28 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
CorKIS3_1.1
PKS
scaffold_58:34142-399925,850
CorKIS3_1.2
NRPS-Like
scaffold_250:10095-2969819,603
CorKIS3_1.3
PKS-Like
scaffold_42:69637-762726,635
CorKIS3_1.4
PKS-Like
scaffold_49:140924-16439423,470
CorKIS3_1.5
NRPS-Like
scaffold_33:324435-33551811,083
CorKIS3_1.6
NRPS-Like
scaffold_32:224533-2286994,166
CorKIS3_1.7
PKS
scaffold_31:177463-1827065,243
CorKIS3_1.8
HYBRID
scaffold_31:260690-29870538,015
CorKIS3_1.9
TC
scaffold_2:1118149-113551117,362
CorKIS3_1.10
TC
scaffold_7:1065252-10666491,397
CorKIS3_1.11
PKS
scaffold_6:324181-34256218,381
CorKIS3_1.12
PKS
scaffold_6:402806-42522722,421
CorKIS3_1.13
PKS
scaffold_6:564872-57802013,148
CorKIS3_1.14
TC
scaffold_6:777545-7791331,588
CorKIS3_1.15
TC
scaffold_9:426423-45091624,493
CorKIS3_1.16
NRPS-Like
scaffold_28:160201-18306622,865
CorKIS3_1.17
NRPS-Like
scaffold_28:189375-20964520,270
CorKIS3_1.18
PKS
scaffold_28:298485-31972621,241
CorKIS3_1.19
NRPS-Like
scaffold_107:60277-7245512,178
CorKIS3_1.20
TC
scaffold_8:74523-797175,194
CorKIS3_1.21
TC
scaffold_8:107067-1084271,360
CorKIS3_1.22
NRPS-Like
scaffold_8:168345-17886410,519
CorKIS3_1.23
PKS
scaffold_8:665315-67561910,304
CorKIS3_1.24
NRPS-Like
scaffold_12:7483-117914,308
CorKIS3_1.25
HYBRID
scaffold_19:161874-1702898,415
CorKIS3_1.26
TC
scaffold_19:238303-25533317,030
CorKIS3_1.27
TC
scaffold_72:89063-10115212,089
CorKIS3_1.28
NRPS-Like
scaffold_64:128968-1329794,011