Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 33 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Corcam1.1
TC
scaffold_235:62124-639201,796
Corcam1.2
TC
scaffold_69:127962-1292401,278
Corcam1.3
TC
scaffold_83:165386-1667021,316
Corcam1.4
TC
scaffold_88:26215-276831,468
Corcam1.5
TC
scaffold_6:582980-5841221,142
Corcam1.6
TC
scaffold_6:764821-77581810,997
Corcam1.7
TC
scaffold_6:850844-8558244,980
Corcam1.8
TC
scaffold_6:866812-8682811,469
Corcam1.9
TC
scaffold_6:930853-9323221,469
Corcam1.10
NRPS-Like
scaffold_6:995448-10021216,673
Corcam1.11
TC
scaffold_15:594153-5953661,213
Corcam1.12
TC
scaffold_16:422428-4289766,548
Corcam1.13
PKS
scaffold_11:561374-5692837,909
Corcam1.14
TC
scaffold_13:430894-4324401,546
Corcam1.15
TC
scaffold_18:6889-79481,059
Corcam1.16
TC
scaffold_18:48755-502131,458
Corcam1.17
TC
scaffold_12:290996-3006959,699
Corcam1.18
PKS
scaffold_297:18804-3085012,046
Corcam1.19
TC
scaffold_143:16091-173271,236
Corcam1.20
TC
scaffold_143:63087-642601,173
Corcam1.21
TC
scaffold_99:178625-1798881,263
Corcam1.22
PKS
scaffold_107:115004-12546410,460
Corcam1.23
PKS
scaffold_105:157814-1657307,916
Corcam1.24
TC
scaffold_103:39375-411711,796
Corcam1.25
TC
scaffold_108:89088-11372324,635
Corcam1.26
TC
scaffold_426:6197-76631,466
Corcam1.27
TC
scaffold_217:50437-6494914,512
Corcam1.28
PKS-Like
scaffold_281:12111-155843,473
Corcam1.29
HYBRID
scaffold_44:123235-1309657,730
Corcam1.30
PKS
scaffold_41:306749-32893822,189
Corcam1.31
PKS-Like
scaffold_112:113971-1171583,187
Corcam1.32
PKS
scaffold_114:43704-6639122,687
Corcam1.33
PKS
scaffold_118:75-1598915,914