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Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 51 cluster(s) found. 1 2
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Acema1.4
DMAT
scaffold_28:193153-20667213,519
Amal3064.4
DMAT
AM2CTG_592:936-2505424,118
Amamu1.2
DMAT
scaffold_26:207755-22426816,513
Copscl1.3
DMAT
scaffold_41:44101-540019,900
Corca1.17
DMAT
scaffold_5:1836071-186699230,921
Corca1.45
DMAT
scaffold_11:1472414-149822025,806
Geatri1.2
DMAT
scaffold_19:233448-2348571,409
Gloci1.8
DMAT
scaffold_30:415909-42608610,177
Gloci1.10
DMAT
scaffold_36:61926-8687724,951
Gloci1.12
DMAT
scaffold_38:6303-3891832,615
Gloci1.19
DMAT
scaffold_3:993467-10020328,565
Gloci1.22
DMAT
scaffold_3:2760039-277255912,520
Gloci1.47
DMAT
scaffold_8:597903-5993331,430
Gloci1.58
DMAT
scaffold_26:335134-3363481,214
Gloci1.60
DMAT
scaffold_28:215583-23806322,480
Gymlu1.43
DMAT
scaffold_45:113144-1197366,592
HyFL1857_1.22
DMAT
scaffold_1:160348-18980629,458
HyFL1857_1.59
DMAT
scaffold_11:133838-15936725,529
HyFL1857_1.60
DMAT
scaffold_10:503090-52050617,416
Kredeu1.39
DMAT
scaffold_4:369050-38729018,240
Kredeu1.48
DMAT
scaffold_20:94056-10487510,819
Lepnud1.16
DMAT
scaffold_5:91764-13207340,309
Lepnud1.30
DMAT
scaffold_53:47528-6721319,685
Maseb1.31
DMAT
scaffold_18:357159-3641336,974
Masph1.4
DMAT
scaffold_15:75164-9851523,351
Masph1.13
DMAT
scaffold_1:44259-500575,798
Pipbet1_1.17
DMAT
scaffold_168:3564-2447020,906
Pyrco1.3
DMAT
scaffold_649:40289-5962319,334
Pyrly1.23
DMAT
scaffold_20:247338-26898021,642
Pyrly1.28
DMAT
scaffold_4:506295-5076941,399
Pyrom1.1
DMAT
scaffold_38:262860-2674844,624
Pyrtt1.22
DMAT
191577:20860-248904,030
Rhanym2_1.3
DMAT
scaffold_48:187196-1950657,869
Rhesp1.6
DMAT
scaffold_10:594316-595288972
Rhesp1.26
DMAT
scaffold_3:407205-41737210,167
Ricme1.17
DMAT
scaffold_143:46885-490252,140
Rorror1.40
DMAT
scaffold_12:406272-43069324,421
Roster1.18
DMAT
scaffold_5:688265-69938011,115
Roster1.38
DMAT
scaffold_152:46713-479831,270
Schco2272_1.12
DMAT
scaffold_149:35127-366441,517
Schco3.16
DMAT
scaffold_9:535553-5378932,340
Sphbr2.13
DMAT
scaffold_350:30332-399199,587
Sphst1.57
DMAT
scaffold_96:395959-3972191,260
Sphst1.58
DMAT
scaffold_96:449071-4503311,260
Sphst1.59
DMAT
scaffold_1411:29-11951,166
Spofi1.12
DMAT
scaffold_14:254994-26752012,526
Stano2.11
DMAT
scaffold_13:136530-1376011,071
Stano2.29
DMAT
scaffold_9:1306567-132172115,154
Stasp1.14
DMAT
scaffold_3:197067-21526218,195
Stasp1.15
DMAT
scaffold_3:2354337-23602945,957