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Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 287 cluster(s) found. 1 2 3 4 5 6
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Acema1.2
NRPS
scaffold_26:26475-7942352,948
Acema1.11
NRPS
scaffold_7:615845-6246178,772
Acema1.31
NRPS
scaffold_417:3765-2989626,131
Acema1.35
NRPS
scaffold_37:255594-29562940,035
Amal3064.7
NRPS
AM2CTG_1604:265-81627,897
Amal3064.8
NRPS
AM2CTG_297:24150-4088616,736
Amal3064.11
NRPS
AM2CTG_957:31213-5325122,038
Amal3064.12
NRPS
AM2CTG_934:71174-10505933,885
Amal3064.18
NRPS
AM2CTG_60:3665-2551521,850
Amal3064.21
NRPS
AM2CTG_32:30114-4886618,752
Amal3064.22
NRPS
AM2CTG_199:476-1356713,091
Bolcoc1.17
NRPS
scaffold_10:338212-3464058,193
Chame1.3
NRPS
scaffold_1:5048149-507926931,120
Chame1.5
NRPS
scaffold_1:7027821-708990362,082
Chame1.9
NRPS
scaffold_1:8440350-845218611,836
Chame1.14
NRPS
scaffold_3:24698-5430029,602
Chame1.21
NRPS
scaffold_5:648139-67090622,767
Chame1.27
NRPS
scaffold_5:3912903-392789214,989
Chame1.38
NRPS
scaffold_4:3816460-38257189,258
Chame1.42
NRPS
scaffold_9:173335-20674633,411
Chocucu1.4
NRPS
scaffold_47:55696-602754,579
Copscl1.6
NRPS
scaffold_8:326362-33720110,839
Corca1.9
NRPS
scaffold_3:1507970-153002622,056
Corca1.31
NRPS
scaffold_8:1092404-114926956,865
Corca1.33
NRPS
scaffold_8:2158741-218079222,051
Corca1.46
NRPS
scaffold_10:745975-76385817,883
Gloci1.3
NRPS
scaffold_44:12663-4071028,047
Gloci1.7
NRPS
scaffold_31:216843-2207493,906
Gloci1.15
NRPS
scaffold_1:608623-63145722,834
Gloci1.20
NRPS
scaffold_3:1945488-197560530,117
Gloci1.23
NRPS
scaffold_3:2855299-288546330,164
Gloci1.27
NRPS
scaffold_5:2811594-286795956,365
Gloci1.28
NRPS
scaffold_4:566282-59594029,658
Gloci1.31
NRPS
scaffold_4:3668401-370711738,716
Gloci1.52
NRPS
scaffold_21:623158-6313528,194
Gloci1.53
NRPS
scaffold_21:832112-85372021,608
Gloci1.59
NRPS
scaffold_28:3426-1424110,815
Gloci1.63
NRPS
scaffold_15:168084-17887410,790
Gloci1.77
NRPS
scaffold_13:340836-35097710,141
Gymlu1.3
NRPS
scaffold_170:21365-3307611,711
Gymlu1.11
NRPS
scaffold_3:1487782-150402716,245
Gymlu1.49
NRPS
scaffold_118:20141-253525,211
HyFL1857_1.57
NRPS
scaffold_16:665989-6713165,327
HyFL1857_1.70
NRPS
scaffold_63:22761-4264419,883
Hypsu1.4
NRPS
scaffold_7:220277-23084510,568
Kredeu1.5
NRPS
scaffold_55:284157-2902936,136
Kredeu1.12
NRPS
scaffold_40:440872-47344732,575
Kredeu1.29
NRPS
scaffold_1:1871720-18794947,774
Kredeu1.56
NRPS
scaffold_28:485101-50055915,458
Kredeu1.64
NRPS
scaffold_11:38059-419173,858