Due to a planned NERSC power outage, JGI portals will be unavailable 6:00am PDT July 10 - 11:59pm PDT July 14. System Status updates available here.
Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 804 cluster(s) found. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Acema1.1
PKS
scaffold_245:538-91498,611
Acema1.6
PKS
scaffold_65:7740-2745119,711
Acema1.9
PKS
scaffold_1:129178-17407544,897
Acema1.12
PKS
scaffold_17:410517-42741516,898
Acema1.15
PKS
scaffold_13:259986-27051310,527
Acema1.18
PKS
scaffold_144:17674-4078323,109
Acema1.20
PKS
scaffold_57:153117-16332610,209
Acema1.21
PKS
scaffold_58:123933-1291855,252
Acema1.22
PKS
scaffold_540:5028-117726,744
Acema1.26
PKS
scaffold_216:65889-8164915,760
Acema1.28
PKS
scaffold_151:48311-7681128,500
Acema1.32
PKS
scaffold_202:23196-3679413,598
Acema1.36
PKS
scaffold_34:271036-28433513,299
Acema1.37
PKS
scaffold_200:49774-8922839,454
Acema1.38
PKS
scaffold_203:69308-772227,914
Acema1.39
PKS
scaffold_77:182807-1895156,708
Amal3064.1
PKS
AM2CTG_483:43372-6224518,873
Amal3064.9
PKS
AM2CTG_1193:4067-2004915,982
Amal3064.13
PKS
AM2CTG_117:10911-174496,538
Amal3064.15
PKS
AM2CTG_420:8326-2228813,962
Amal3064.19
PKS
AM2CTG_1552:595-1644815,853
Amal3064.20
PKS
AM2CTG_185:34803-7158036,777
Amal3064.25
PKS
AM2CTG_1481:4388-3287628,488
Amal3064.28
PKS
AM2CTG_568:7072-2436017,288
Amamu1.5
PKS
scaffold_10:206033-23009724,064
Amamu1.12
PKS
scaffold_33:195440-20694711,507
Amamu1.16
PKS
scaffold_167:37691-440406,349
Bolcoc1.10
PKS
scaffold_25:51620-6348311,863
Bolcoc1.12
PKS
scaffold_105:9036-187399,703
Bolcoc1.16
PKS
scaffold_14:362250-37535113,101
Boled5.9
PKS
scaffold_9:1162294-118786225,568
Boled5.10
PKS
scaffold_8:1347311-13538836,572
Boledp1.2
PKS
scaffold_7:586389-61208825,699
Chame1.2
PKS
scaffold_1:3286855-330780620,951
Chame1.4
PKS
scaffold_1:5507049-55154758,426
Chame1.6
PKS
scaffold_1:7137057-719130054,243
Chame1.10
PKS
scaffold_1:8461824-847504013,216
Chame1.12
PKS
scaffold_1:9261247-92692738,026
Chame1.13
PKS
scaffold_1:11781689-1182227340,584
Chame1.15
PKS
scaffold_3:2515927-252704711,120
Chame1.16
PKS
scaffold_3:3239124-328756248,438
Chame1.19
PKS
scaffold_2:3169631-321296643,335
Chame1.20
PKS
scaffold_2:4622840-466205239,212
Chame1.22
PKS
scaffold_5:1291787-134689255,105
Chame1.24
PKS
scaffold_5:2408516-243300724,491
Chame1.25
PKS
scaffold_5:3409044-343038521,341
Chame1.26
PKS
scaffold_5:3447026-34563819,355
Chame1.28
PKS
scaffold_4:20739-3522014,481
Chame1.30
PKS
scaffold_4:311533-33237920,846
Chame1.34
PKS
scaffold_4:1514793-15217036,910