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Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 153 cluster(s) found. 1 2 3 4
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Acema1.5
PKS-Like
scaffold_29:32204-337291,525
Acema1.8
PKS-Like
scaffold_63:159265-17309113,826
Acema1.14
PKS-Like
scaffold_10:195251-22120525,954
Acema1.25
PKS-Like
scaffold_108:161506-1628581,352
Acema1.34
PKS-Like
scaffold_31:334976-36047325,497
Amal3064.24
PKS-Like
AM2CTG_1079:10239-176777,438
Boledp1.8
PKS-Like
scaffold_40:195192-2019256,733
Canalb1.1
PKS-Like
scaffold_6:1015233-105238637,153
Canalb1.2
PKS-Like
scaffold_6:1091284-11009009,616
Cepfr1_1.2
PKS-Like
scaffold_1:1095289-10970311,742
Cepfr1_1.3
PKS-Like
scaffold_1:1205000-12106805,680
Chame1.8
PKS-Like
scaffold_1:8098161-811267414,513
Chame1.18
PKS-Like
scaffold_2:2168588-218249813,910
Chame1.31
PKS-Like
scaffold_4:610670-63859927,929
Chocucu1.2
PKS-Like
scaffold_6:332206-3371714,965
Corca1.4
PKS-Like
scaffold_1:2107862-212509517,233
Corca1.32
PKS-Like
scaffold_8:2052890-209415241,262
Corcam1.28
PKS-Like
scaffold_281:12111-155843,473
Corcam1.31
PKS-Like
scaffold_112:113971-1171583,187
CorKIS3_1.3
PKS-Like
scaffold_42:69637-762726,635
CorKIS3_1.4
PKS-Like
scaffold_49:140924-16439423,470
Galsul1.1
PKS-Like
scaffold_6:262625-2641691,544
Galsul1.2
PKS-Like
scaffold_10:229576-2312671,691
Gloci1.30
PKS-Like
scaffold_4:2390075-23917371,662
Gloci1.39
PKS-Like
scaffold_6:571925-5780796,154
HyFL1857_1.12
PKS-Like
scaffold_49:276706-30637629,670
HyFL1857_1.52
PKS-Like
scaffold_15:137001-15160414,603
HyFL1857_1.55
PKS-Like
scaffold_17:684526-6862641,738
Issorie2.2
PKS-Like
scaffold_3:1619350-16208041,454
Issorie2.3
PKS-Like
scaffold_2:1622680-16294016,721
Kicala1.1
PKS-Like
scaffold_33:14586-193724,786
Kicala1.5
PKS-Like
scaffold_10:512971-5142671,296
Kredeu1.21
PKS-Like
scaffold_39:205866-21738011,514
Kredeu1.23
PKS-Like
scaffold_98:29520-347785,258
Kredeu1.27
PKS-Like
scaffold_1:998523-101233013,807
Kredeu1.28
PKS-Like
scaffold_1:1129404-11307431,339
Kredeu1.36
PKS-Like
scaffold_2:1469745-148899219,247
Marbr1.5
PKS-Like
scaffold_1:2556121-257135115,230
Marbr1.6
PKS-Like
scaffold_1:3111672-31173515,679
Maseb1.8
PKS-Like
scaffold_3:1037917-107354435,627
Maseb1.21
PKS-Like
scaffold_14:334559-3364991,940
Masph1.1
PKS-Like
scaffold_30:167479-20291635,437
Masph1.23
PKS-Like
scaffold_5:1857176-18588981,722
Masph1.29
PKS-Like
scaffold_9:203809-21726113,452
Picsp_1.3
PKS-Like
scaffold_16:158347-1616523,305
Picsp_1.4
PKS-Like
scaffold_1:330-3010629,776
Picsp_1.6
PKS-Like
scaffold_1:1504598-15060281,430
Picsp_1.8
PKS-Like
scaffold_2:476203-51087134,668
Picsp_1.9
PKS-Like
scaffold_8:329234-38405754,823
Picst3.1
PKS-Like
chr_1.2:439657-46279723,140