Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 425 cluster(s) found. 1 2 3 4 5 6 7 8 9
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Acema1.33
TC
scaffold_324:28226-345926,366
Amal3064.5
TC
AM2CTG_1297:14274-3748223,208
Amal3064.26
TC
AM2CTG_1270:6794-7275481
Amamu1.1
TC
scaffold_20:286685-2904483,763
Amamu1.3
TC
scaffold_28:13514-147681,254
Amamu1.4
TC
scaffold_68:10043-156215,578
Amamu1.6
TC
scaffold_13:350984-36852217,538
Amamu1.7
TC
scaffold_13:378999-41160532,606
Amamu1.9
TC
scaffold_12:492564-4939971,433
Amamu1.10
TC
scaffold_19:70941-725651,624
Amamu1.11
TC
scaffold_108:73213-8618112,968
Amamu1.13
TC
scaffold_30:148991-1502381,247
Amamu1.15
TC
scaffold_35:82990-841311,141
Bolcoc1.2
TC
scaffold_36:234053-2355031,450
Bolcoc1.3
TC
scaffold_34:322155-34051518,360
Bolcoc1.7
TC
scaffold_3:334810-3362811,471
Bolcoc1.13
TC
scaffold_89:75124-765011,377
Bolcoc1.14
TC
scaffold_186:6465-76581,193
Bolcoc1.15
TC
scaffold_14:336699-3384871,788
Bolcoc1.18
TC
scaffold_10:630816-64690616,090
Bolcoc1.22
TC
scaffold_66:86981-881741,193
Boled1.3
TC
scaffold_4:1038015-10391721,157
Boled1.4
TC
scaffold_8:141474-15593714,463
Boled1.5
TC
scaffold_10:217892-2253517,459
Boled1.6
TC
scaffold_13:164523-1726028,079
Boled1.8
TC
scaffold_18:306289-3129346,645
Boled1.9
TC
scaffold_106:51611-530211,410
Boled1.15
TC
scaffold_77:84029-10441020,381
Boled1.16
TC
scaffold_77:129432-1314221,990
Chagl_1.19
TC
scaffold_2:4418426-44235375,111
Chagl_1.37
TC
scaffold_6:2176389-21777311,342
Chagl_1.38
TC
scaffold_6:3457243-34640546,811
Conli1.5
TC
NODE_13816:50210-566116,401
Conli1.7
TC
NODE_758:21985-280766,091
Conli1.19
TC
NODE_1338:36869-447377,868
Conlig1.9
TC
scaffold_10:1755076-17593304,254
Conlig1.20
TC
scaffold_6:234797-2426867,889
Conpu1.3
TC
scaffold_3:107662-1091811,519
Conpu1.4
TC
scaffold_3:428770-4350876,317
Conpu1.5
TC
scaffold_3:1985920-19870481,128
Conpu1.8
TC
scaffold_2:350437-37253222,095
Conpu1.16
TC
scaffold_6:2351420-23526781,258
Conpu1.18
TC
scaffold_8:921323-9225141,191
Conpu1.19
TC
scaffold_8:945566-96594320,377
Conpu1.25
TC
scaffold_8:1942967-19443901,423
Conpu1.26
TC
scaffold_8:1968887-19701601,273
Conpu1.29
TC
scaffold_21:413636-4150091,373
Conpu1.30
TC
scaffold_11:521994-5318459,851
Conpu1.31
TC
scaffold_11:1194232-11992935,061
Conpu1.32
TC
scaffold_11:1209475-12106411,166