Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 463 cluster(s) found. 1 2 3 4 5 6 7 8 9 10
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Hyssto1.33
TC
scaffold_78:293932-30773713,805
Hyssto1.34
TC
scaffold_78:401846-402308462
Hyssto1.35
TC
scaffold_74:55982-574051,423
Kalpfe1.2
TC
scaffold_46:108088-1098981,810
Kalpfe1.4
TC
scaffold_3:2087791-20889231,132
Karrh1.13
TC
scaffold_1:453799-46510911,310
Karrh1.17
TC
scaffold_3:621670-64949427,824
Karrh1.18
TC
scaffold_3:1669821-16770907,269
Karrh1.20
TC
scaffold_2:1709937-1710778841
Khuory1.7
TC
scaffold_12:450023-4523292,306
Khuory1.15
TC
scaffold_3:381083-3850974,014
Khuory1.25
TC
scaffold_5:1339841-137071330,872
Khuory1.32
TC
scaffold_7:2353927-23555901,663
LobpulSc1.5
TC
scaffold_711:14768-158701,102
LobpulSc1.11
TC
scaffold_335:6178-83902,212
LobpulSc1.21
TC
scaffold_391:15412-3418618,774
LobpulSc1.30
TC
scaffold_618:8518-103771,859
LobpulSc1.48
TC
scaffold_106:94798-970622,264
LobpulSc1.58
TC
scaffold_554:4983-75232,540
LobpulSc1.62
TC
scaffold_596:13378-158972,519
LobpulSc1.64
TC
scaffold_114:75444-779162,472
LraINPA1820_1.5
TC
scaffold_315:32578-342141,636
LraINPA1820_1.7
TC
scaffold_439:59-11301,071
LraINPA1820_1.8
TC
scaffold_227:199-3076130,562
LraINPA1820_1.9
TC
scaffold_17:190925-1983927,467
LraINPA1820_1.12
TC
scaffold_19:42535-496837,148
LraINPA1820_1.13
TC
scaffold_69:8685-98291,144
LraINPA1820_1.15
TC
scaffold_447:2715-2464421,929
LraINPA1820_1.20
TC
scaffold_529:1483-85937,110
Onnsc1.3
TC
scaffold_62:81806-10148119,675
Onnsc1.5
TC
scaffold_189:30048-4307013,022
Onnsc1.6
TC
scaffold_271:39629-406861,057
Onnsc1.8
TC
scaffold_136:5749-71721,423
Onnsc1.9
TC
scaffold_136:22803-239401,137
Onnsc1.11
TC
scaffold_2:85891-870131,122
Onnsc1.12
TC
scaffold_2:96211-975041,293
Onnsc1.15
TC
scaffold_13:167361-1759098,548
Onnsc1.17
TC
scaffold_96:113980-1150871,107
Onnsc1.18
TC
scaffold_208:54758-558801,122
Onnsc1.20
TC
scaffold_412:4104-108876,783
Phcap1.11
TC
scaffold_2:917901-9196761,775
Phimu1.4
TC
scaffold_17:282497-2842301,733
Phimu1.10
TC
scaffold_10:23601-3894415,343
Phimu1.24
TC
scaffold_5:2015959-202679010,831
Phisc1.30
TC
scaffold_7:989624-100626016,636
Phisc1.38
TC
scaffold_8:916528-9184701,942
Phisc1.49
TC
scaffold_21:980672-100411923,447
Phisc1.53
TC
scaffold_24:383720-40615122,431
Phlbr1.1
TC
scaffold_20:358660-3613102,650
Phlbr1.6
TC
scaffold_17:1017837-10190181,181