Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 463 cluster(s) found. 1 2 3 4 5 6 7 8 9 10
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Phlbr1.9
TC
scaffold_779:591-19991,408
Phlbr1.18
TC
scaffold_2:1202059-1202823764
Phlbr1.24
TC
scaffold_7:147033-1488651,832
Phlbr1.25
TC
scaffold_7:957091-97785920,768
Phlbr1.33
TC
scaffold_8:1666580-16679511,371
PhlFC14_2.1
TC
scaffold_13:34509-360291,520
PhlFC14_2.2
TC
scaffold_13:467974-4699101,936
PhlFC14_2.10
TC
scaffold_2:1402358-14036751,317
PhlFC14_2.17
TC
scaffold_5:1967385-19740956,710
PhlFC14_2.18
TC
scaffold_4:128794-15141122,617
PhlFC14_2.20
TC
scaffold_6:1944482-19482193,737
PhlFC14_2.21
TC
scaffold_6:2212845-22157542,909
PhlFC14_2.22
TC
scaffold_6:2274563-22762611,698
PhlFC14_2.25
TC
scaffold_8:1347272-13488491,577
PhlFC14_2.26
TC
scaffold_8:1657290-16584461,156
Phlgi1.7
TC
scaffold_4:11615-3429422,679
Phlgi1.10
TC
scaffold_11:157300-1602862,986
Phlgi1.16
TC
scaffold_36:145856-16080714,951
Phlgi1.17
TC
scaffold_36:172342-1735791,237
Phlrad1.1
TC
scaffold_8:47442-486921,250
Phlrad1.3
TC
scaffold_8:1301123-13039532,830
Phlrad1.5
TC
scaffold_14:191676-20205710,381
Phlrad1.6
TC
scaffold_14:879930-89780917,879
Phlrad1.16
TC
scaffold_6:93725-984564,731
Phlrad1.17
TC
scaffold_6:135749-14822412,475
Phoaln1.1
TC
scaffold_21:29146-306531,507
Phoaln1.3
TC
scaffold_28:46876-479941,118
Phoaln1.10
TC
scaffold_6:366273-3676331,360
Phoaln1.14
TC
scaffold_343:11790-134131,623
Phoaln1.15
TC
scaffold_14:188842-1908812,039
Phoaln1.17
TC
scaffold_16:494150-4956551,505
Phoaln1.18
TC
scaffold_10:7918-4175233,834
Phoaln1.19
TC
scaffold_10:516958-53363816,680
Phoaln1.20
TC
scaffold_10:542864-55501412,150
Phoaln1.21
TC
scaffold_19:57210-584671,257
Phoaln1.22
TC
scaffold_18:191070-22036129,291
Phoaln1.23
TC
scaffold_18:306401-32625919,858
Phoaln1.28
TC
scaffold_54:262656-28946326,807
Phoaln1.29
TC
scaffold_107:154310-17107316,763
Phoaln1.32
TC
scaffold_42:118512-1199141,402
Phoaln1.33
TC
scaffold_42:139849-15414514,296
Phoaln1.34
TC
scaffold_42:254172-2555211,349
Phoaln1.35
TC
scaffold_38:118661-1265467,885
Polsqu1.1
TC
scaffold_126:47545-494001,855
Polsqu1.4
TC
scaffold_85:6842-2075413,912
Polsqu1.13
TC
scaffold_61:44019-457821,763
Polsqu1.17
TC
scaffold_42:110913-1171626,249
Polsqu1.19
TC
scaffold_34:75121-762921,171
Polsqu1.20
TC
scaffold_34:88056-899401,884
Polsqu1.25
TC
scaffold_70:62250-640241,774