Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 463 cluster(s) found. 1 2 3 4 5 6 7 8 9 10
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Porchr1.1
TC
scaffold_24:185227-1864751,248
Porchr1.2
TC
scaffold_24:218473-2197821,309
Porchr1.3
TC
scaffold_24:223302-2248461,544
Porchr1.9
TC
scaffold_65:132444-1335681,124
Porchr1.10
TC
scaffold_60:223487-224421934
Porchr1.12
TC
scaffold_1:567340-5685011,161
Porchr1.13
TC
scaffold_2:1300306-13102019,895
Porchr1.15
TC
scaffold_9:21169-279316,762
Porchr1.16
TC
scaffold_16:288853-30692718,074
Porchr1.17
TC
scaffold_16:317568-3261778,609
Porchr1.18
TC
scaffold_16:490568-4999569,388
Porchr1.22
TC
scaffold_91:27212-5105123,839
Porchr1.23
TC
scaffold_43:41069-6386322,794
Porchr1.24
TC
scaffold_32:366353-37979213,439
Porchr1.27
TC
scaffold_34:209234-2104361,202
Porchr1.28
TC
scaffold_39:11687-129911,304
Pormuc1.3
TC
scaffold_13:368898-3700541,156
Pormuc1.4
TC
scaffold_1:67042-8225215,210
Pormuc1.5
TC
scaffold_3:81954-877185,764
Pormuc1.6
TC
scaffold_3:168055-19795729,902
Pormuc1.8
TC
scaffold_3:2088203-210933021,127
Pormuc1.13
TC
scaffold_6:233401-2345441,143
Pornie1_2.8
TC
scaffold_1:551969-5531731,204
Pornie1_2.9
TC
scaffold_5:602238-6035501,312
Pornie1_2.11
TC
scaffold_10:70880-8106310,183
Pornie1_2.12
TC
scaffold_144:18339-3322514,886
Pornie1_2.14
TC
scaffold_53:23948-318197,871
Pornie1_2.15
TC
scaffold_55:59680-608041,124
Pornie1_2.16
TC
scaffold_57:150572-16417213,600
Pornie1_2.17
TC
scaffold_56:185799-19680211,003
Pornie1_2.18
TC
scaffold_190:595-2135220,757
Pornie1_2.19
TC
scaffold_253:39489-421232,634
Pornie1_2.20
TC
scaffold_106:3591-1673213,141
Pornie1_2.21
TC
scaffold_106:19624-4348723,863
Pornie1_2.22
TC
scaffold_486:1542-58124,270
Pornie1_2.23
TC
scaffold_44:223573-2248911,318
Pornie1_2.24
TC
scaffold_49:32177-390636,886
Pornie1_2.25
TC
scaffold_39:186434-1877851,351
Porpun1.12
TC
scaffold_178:42410-438971,487
Porpun1.27
TC
scaffold_15:148171-1570068,835
Porpun1.37
TC
scaffold_148:59488-8486325,375
Porpun1.45
TC
scaffold_109:41392-434612,069
Porpun1.47
TC
scaffold_103:114269-13062816,359
Porpun1.56
TC
scaffold_323:13710-2736313,653
Pospl1.1
TC
scaffold_4610:2-10421,040
Pospl1.2
TC
scaffold_373:10594-123081,714
Pospl1.3
TC
scaffold_65:241672-2429461,274
Pospl1.5
TC
scaffold_61:249743-2511401,397
Pospl1.7
TC
scaffold_82:262030-2635421,512
Pospl1.13
TC
scaffold_87:36756-378711,115