Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 425 cluster(s) found. 1 2 3 4 5 6 7 8 9
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Pospl1.18
TC
scaffold_105:214541-2158691,328
Pospl1.19
TC
scaffold_101:28053-293401,287
Pospl1.20
TC
scaffold_154:97461-989671,506
PosplRSB12_1.6
TC
scaffold_9:1046099-10474051,306
PosplRSB12_1.8
TC
scaffold_9:1767789-17691061,317
PosplRSB12_1.9
TC
scaffold_3:188617-1925703,953
PosplRSB12_1.10
TC
scaffold_3:257007-27189714,890
PosplRSB12_1.11
TC
scaffold_3:309366-32827118,905
PosplRSB12_1.13
TC
scaffold_20:537289-55363316,344
PosplRSB12_1.14
TC
scaffold_21:527223-5287351,512
PosplRSB12_1.20
TC
scaffold_6:942337-95669314,356
PosplRSB12_1.23
TC
scaffold_17:982425-99596413,539
PosplRSB12_1.24
TC
scaffold_16:567418-58570818,290
PosplRSB12_1.25
TC
scaffold_13:243300-2457082,408
Psehy1.10
TC
scaffold_2:213205-2143391,134
Psehy1.16
TC
scaffold_4:619311-63344514,134
Psehy1.23
TC
scaffold_24:265203-30416438,961
Psehy1.29
TC
scaffold_11:281818-29283211,014
Psehy1.32
TC
scaffold_12:754304-77170117,397
Psehy1.34
TC
scaffold_12:1029273-104235613,083
Rhesp1.44
TC
scaffold_46:84475-858591,384
Rhesp1.47
TC
scaffold_20:1092016-10937841,768
Rhesp1.49
TC
scaffold_21:83175-887405,565
Rhier1.8
TC
scaffold_3:296295-2982711,976
Rhier1.16
TC
scaffold_22:454849-4589464,097
Ruscom1.2
TC
scaffold_127:85851-873391,488
Ruscom1.5
TC
scaffold_1:151867-1531171,250
Ruscom1.6
TC
scaffold_3:220893-2220411,148
Ruscom1.7
TC
scaffold_9:357734-37481817,084
Ruscom1.9
TC
scaffold_102:102867-1043181,451
Ruscom1.10
TC
scaffold_43:158835-1655466,711
Ruscom1.12
TC
scaffold_324:25603-284672,864
Ruscom1.13
TC
scaffold_167:15284-165301,246
Ruscom1.14
TC
scaffold_212:23354-258472,493
Schco2271_1.12
TC
scaffold_18:31227-326071,380
Schco2271_1.13
TC
scaffold_18:69801-712941,493
Schco2271_1.14
TC
scaffold_55:27498-349217,423
Sebve1.3
TC
scaffold_7:803259-8053912,132
Sebvebe1.2
TC
scaffold_45:16358-181081,750
Seppo1.9
TC
scaffold_132:4319-1927214,953
Seppo1.20
TC
scaffold_108:59983-617261,743
Seppo1.23
TC
scaffold_12:288110-2893381,228
Serbor1.4
TC
scaffold_157:145-31332,988
Serbor1.5
TC
scaffold_157:57048-601663,118
Serbor1.6
TC
scaffold_33:160510-1616681,158
Serbor1.7
TC
scaffold_33:225575-2267331,158
Serbor1.12
TC
scaffold_34:169226-1706911,465
Serbor1.13
TC
scaffold_84:14788-177782,990
Serbor1.18
TC
scaffold_7:88671-10454715,876
Serbor1.25
TC
scaffold_28:180599-1823141,715