Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 463 cluster(s) found. 1 2 3 4 5 6 7 8 9 10
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Serbor1.31
TC
scaffold_18:208685-24606737,382
Serbor1.32
TC
scaffold_18:257375-29693139,556
Serbor1.33
TC
scaffold_91:28949-301381,189
Serbor1.34
TC
scaffold_91:64486-9375529,269
Serbor1.35
TC
scaffold_174:37832-419904,158
Serend1.3
TC
scaffold_12:520795-53805817,263
Serla_varsha1.5
TC
scaffold_1087:2-62616,259
Serla_varsha1.10
TC
scaffold_190:5936-3206126,125
Serla_varsha1.18
TC
scaffold_143:8052-91911,139
Serla_varsha1.25
TC
scaffold_129:22516-236151,099
Serla_varsha1.29
TC
scaffold_1108:8944-100721,128
Serla_varsha1.31
TC
scaffold_218:7873-2446616,593
Serla_varsha1.39
TC
scaffold_478:319-15841,265
SerlaS7_3_2.2
TC
scaffold_3:2535733-255493019,197
SerlaS7_3_2.7
TC
scaffold_2:2148541-217429325,752
SerlaS7_3_2.11
TC
scaffold_7:1424586-14260721,486
SerlaS7_3_2.12
TC
scaffold_7:1659883-167894319,060
SerlaS7_3_2.13
TC
scaffold_7:1704222-17053811,159
SerlaS7_3_2.21
TC
scaffold_9:1906382-192541219,030
SerlaS7_3_2.25
TC
scaffold_15:998383-101047812,095
SerlaS7_3_2.27
TC
scaffold_11:1225794-12275821,788
SerlaS7_3_2.32
TC
scaffold_13:310708-3119521,244
SerlaS7_3_2.33
TC
scaffold_13:386679-3889032,224
SerlaS7_9_2.1
TC
scaffold_15:65719-7720311,484
SerlaS7_9_2.10
TC
scaffold_11:617745-6195311,786
SerlaS7_9_2.11
TC
scaffold_13:1108053-112219014,137
SerlaS7_9_2.19
TC
scaffold_3:671607-6731161,509
SerlaS7_9_2.21
TC
scaffold_2:1327867-135361525,748
SerlaS7_9_2.28
TC
scaffold_7:1447809-14492951,486
SerlaS7_9_2.29
TC
scaffold_7:1686812-170592919,117
SerlaS7_9_2.30
TC
scaffold_7:1731508-17326331,125
Setho1.1
TC
scaffold_247:7339-84241,085
Setho1.18
TC
scaffold_451:36-614578
Settu3.15
TC
scaffold_4:1779366-17807121,346
Settur1.11
TC
scaffold_5:437038-4389361,898
Settur3.13
TC
scaffold_5:437038-4389361,898
Sisbr1.1
TC
scaffold_52:130012-14086310,851
Sisbr1.2
TC
scaffold_7:533992-5403096,317
Sisbr1.3
TC
scaffold_7:879921-8811861,265
Sisbr1.4
TC
scaffold_7:893415-8945891,174
Sisbr1.5
TC
scaffold_5:478732-4876338,901
Sisbr1.8
TC
scaffold_35:208527-2099671,440
Sisbr1.13
TC
scaffold_9:588774-5979319,157
Sisbr1.15
TC
scaffold_8:93569-1017268,157
Sisbr1.16
TC
scaffold_20:78916-11204233,126
Sisbr1.26
TC
scaffold_11:706263-7156979,434
Sisni1.1
TC
scaffold_50:37979-404242,445
Sisni1.2
TC
scaffold_50:63656-8272119,065
Sisni1.3
TC
scaffold_41:88558-10428115,723
Sisni1.4
TC
scaffold_41:118019-14860630,587