Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 579 cluster(s) found. 1 2 3 4 5 6 7 8 9 10 11 12
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Acema1.33
TC
scaffold_324:28226-345926,366
Amal3064.5
TC
AM2CTG_1297:14274-3748223,208
Amal3064.26
TC
AM2CTG_1270:6794-7275481
Amamu1.1
TC
scaffold_20:286685-2904483,763
Amamu1.3
TC
scaffold_28:13514-147681,254
Amamu1.4
TC
scaffold_68:10043-156215,578
Amamu1.6
TC
scaffold_13:350984-36852217,538
Amamu1.7
TC
scaffold_13:378999-41160532,606
Amamu1.9
TC
scaffold_12:492564-4939971,433
Amamu1.10
TC
scaffold_19:70941-725651,624
Amamu1.11
TC
scaffold_108:73213-8618112,968
Amamu1.13
TC
scaffold_30:148991-1502381,247
Amamu1.15
TC
scaffold_35:82990-841311,141
Bolcoc1.2
TC
scaffold_36:234053-2355031,450
Bolcoc1.3
TC
scaffold_34:322155-34051518,360
Bolcoc1.7
TC
scaffold_3:334810-3362811,471
Bolcoc1.13
TC
scaffold_89:75124-765011,377
Bolcoc1.14
TC
scaffold_186:6465-76581,193
Bolcoc1.15
TC
scaffold_14:336699-3384871,788
Bolcoc1.18
TC
scaffold_10:630816-64690616,090
Bolcoc1.22
TC
scaffold_66:86981-881741,193
Boled5.7
TC
scaffold_4:1708071-172259114,520
Boled5.8
TC
scaffold_9:818804-8199611,157
Boled5.11
TC
scaffold_15:627227-65191024,683
Boled5.13
TC
scaffold_16:155860-1577011,841
Boled5.17
TC
scaffold_208:42024-42439415
Boled5.18
TC
scaffold_35:213568-2150391,471
Boled5.19
TC
scaffold_35:252561-26543112,870
Boled5.20
TC
scaffold_70:47696-491061,410
Boledp1.3
TC
scaffold_7:820460-820992532
Boledp1.4
TC
scaffold_7:970459-9723861,927
Boledp1.5
TC
scaffold_46:98355-1049906,635
Boledp1.9
TC
scaffold_1:2821617-28231711,554
Boledp1.10
TC
scaffold_1:2849751-287096721,216
Boledp1.12
TC
scaffold_27:23399-249891,590
Boledp1.13
TC
scaffold_4:1020960-10284397,479
Boledp1.17
TC
scaffold_68:183632-1850421,410
Chame1.17
TC
scaffold_2:111052-1138242,772
Chame1.23
TC
scaffold_5:2293907-22952731,366
Chame1.32
TC
scaffold_4:783488-81369530,207
Chame1.43
TC
scaffold_8:144992-1544629,470
Copscl1.7
TC
scaffold_96:44271-459071,636
Copscl1.8
TC
scaffold_14:321232-3225851,353
Copscl1.9
TC
scaffold_17:213775-2223108,535
Copscl1.11
TC
scaffold_19:4568-2094016,372
Copscl1.12
TC
scaffold_70:86346-900903,744
Corca1.2
TC
scaffold_35:11847-3412522,278
Corca1.40
TC
scaffold_15:873643-8836119,968
Corca1.47
TC
scaffold_10:1068116-109996931,853
Corcam1.1
TC
scaffold_235:62124-639201,796