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Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 2231 cluster(s) found. 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Altta1.1
PKS
ALMCTG_791:2658-2808725,429
Altta1.2
PKS-Like
ALMCTG_487:7287-122224,935
Altta1.3
NRPS
ALMCTG_1478:79670-10481525,145
Altta1.4
HYBRID
ALMCTG_1110:2916-2539922,483
Altta1.5
PKS
ALMCTG_111:2075-1503112,956
Altta1.6
NRPS-Like
ALMCTG_1651:33851-4590512,054
Altta1.7
TC
ALMCTG_1004:12000-12481481
Altta1.8
NRPS-Like
ALMCTG_1539:19585-269627,377
Altta1.9
PKS
ALMCTG_67:33919-421798,260
Altta1.10
NRPS
ALMCTG_754:6249-2500118,752
Altta1.11
NRPS-Like
ALMCTG_628:726-2036119,635
Altta1.12
NRPS
ALMCTG_928:2869-2020417,335
Altta1.13
PKS-Like
ALMCTG_1381:21524-304998,975
Altta1.14
PKS
ALMCTG_1381:57586-7341815,832
Altta1.15
TC
ALMCTG_2399:26115-275971,482
Altta1.16
NRPS
ALMCTG_732:17070-3891921,849
Altta1.17
PKS
ALMCTG_426:625-78507,225
Altta1.18
PKS-Like
ALMCTG_1032:10295-177327,437
Altta1.19
DMAT
ALMCTG_1729:47-1312013,073
Altta1.20
NRPS
ALMCTG_2083:30938-5297722,039
Altta1.21
PKS
ALMCTG_1572:13-49084,895
Altta1.22
NRPS-Like
ALMCTG_403:49367-6247413,107
Altta1.23
NRPS-Like
ALMCTG_463:1823-50543,231
Altta1.24
PKS
ALMCTG_514:1547-84336,886
Altta1.25
NRPS-Like
ALMCTG_215:95-33693,274
Altta1.26
NRPS-Like
ALMCTG_88:52883-6855615,673
Altta1.27
PKS
ALMCTG_442:116167-13013013,963
Altta1.28
PKS
ALMCTG_150:7105-2436917,264
Altta1.29
NRPS-Like
ALMCTG_2306:69411-8345514,044
Altta1.30
TC
ALMCTG_787:43160-7222929,069
Altta1.31
PKS
ALMCTG_1463:4310-1913614,826
Altte1.1
PKS
AT2CTG_32:25369-5849433,125
Altte1.2
NRPS-Like
AT2CTG_35:181508-19356212,054
Altte1.3
NRPS-Like
AT2CTG_412:689153-70317114,018
Altte1.4
PKS
AT2CTG_237:253928-28069426,766
Altte1.5
NRPS-Like
AT2CTG_134:251259-28216730,908
Altte1.6
NRPS
AT2CTG_209:3576-3731833,742
Altte1.7
NRPS-Like
AT2CTG_611:3314-2675823,444
Altte1.8
NRPS-Like
AT2CTG_616:1052658-107351720,859
Altte1.9
TC
AT2CTG_122:785459-81504929,590
Altte1.10
PKS-Like
AT2CTG_122:864848-8722857,437
Altte1.11
PKS
AT2CTG_73:62237-8072118,484
Altte1.12
TC
AT2CTG_436:91088-11370622,618
Altte1.13
NRPS
AT2CTG_197:346079-37970933,630
Altte1.14
PKS
AT2CTG_80:421319-43844317,124
Altte1.15
PKS-Like
AT2CTG_83:7875-2542817,553
Altte1.16
TC
AT2CTG_89:388361-40567217,311
Altte1.17
PKS
AT2CTG_463:145801-1523396,538
Altte1.18
NRPS
AT2CTG_463:1572129-159397921,850
Altte1.19
NRPS
AT2CTG_587:61284-8003318,749