Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 51 cluster(s) found. 1 2
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Acema1.4
DMAT
scaffold_28:193153-20667213,519
Altte1.21
DMAT
AT2CTG_90:17795-190031,208
Altto1.21
DMAT
ASLCTG_3062:21794-3549513,701
Altto1.26
DMAT
ASLCTG_4035:313-2926028,947
Copci1.9
DMAT
Chr_11:105831-11755111,720
FusspF11_1.18
DMAT
scaffold_5:1036630-106353126,901
FusspF11_1.28
DMAT
scaffold_8:20458-216311,173
Fusve1.2
DMAT
Supercontig_19:99117-13950340,386
Geatri1.2
DMAT
scaffold_19:233448-2348571,409
Gymch1.9
DMAT
scaffold_380:2249-1636014,111
HypEC38_3.10
DMAT
scaffold_32:330220-34781117,591
HypEC38_3.63
DMAT
scaffold_18:829411-85310823,697
Ilyrob1.38
DMAT
scaffold_15:381756-39223310,477
Ilyrob1.44
DMAT
scaffold_13:43490-6198518,495
Jamsp1.9
DMAT
scaffold_4:432433-4371354,702
Lacbi2.14
DMAT
LG_1:7886643-789958512,942
Macfu1.8
DMAT
scaffold_75:54113-553001,187
Neudi1.7
DMAT
scaffold_6:245349-26099215,643
Panpap1.6
DMAT
scaffold_11:925373-94634520,972
Pilcr1.6
DMAT
scaffold_00041:34430-428658,435
Pilcr1.18
DMAT
scaffold_00118:62096-639371,841
Pilcr1.19
DMAT
scaffold_00110:58060-596071,547
Pyrco1.3
DMAT
scaffold_649:40289-5962319,334
Pyrly1.23
DMAT
scaffold_20:247338-26898021,642
Pyrly1.28
DMAT
scaffold_4:506295-5076941,399
Pyrom1.1
DMAT
scaffold_38:262860-2674844,624
Pyrtt1.22
DMAT
191577:20860-248904,030
Radcon1.4
DMAT
scaffold_11:1129116-11332854,169
Radcon1.5
DMAT
scaffold_11:1629954-16319712,017
Radcon1.21
DMAT
scaffold_6:2465643-24751169,473
Radcon1.24
DMAT
scaffold_8:1234718-12366221,904
Radcon1.25
DMAT
scaffold_8:1252588-126521212,624
Radcon1.26
DMAT
scaffold_20:59535-614041,869
Radcon1.27
DMAT
scaffold_20:214509-23172217,213
Rhesp1.6
DMAT
scaffold_10:594316-595288972
Rhesp1.26
DMAT
scaffold_3:407205-41737210,167
Rorror1.40
DMAT
scaffold_12:406272-43069324,421
Roster1.18
DMAT
scaffold_5:688265-69938011,115
Roster1.38
DMAT
scaffold_152:46713-479831,270
Schco2272_1.12
DMAT
scaffold_149:35127-366441,517
Schco3.16
DMAT
scaffold_9:535553-5378932,340
Spofi1.12
DMAT
scaffold_14:254994-26752012,526
Stano2.11
DMAT
scaffold_13:136530-1376011,071
Stano2.29
DMAT
scaffold_9:1306567-132172115,154
Stasp1.14
DMAT
scaffold_3:197067-21526218,195
Stasp1.15
DMAT
scaffold_3:2354337-23602945,957
Stehi1.35
DMAT
scaffold_16:285677-2926156,938
Talpro1.10
DMAT
scaffold_10:1058068-109820940,141
Talpro1.27
DMAT
scaffold_19:46487-6675520,268
Talpro1.36
DMAT
scaffold_3:1892717-191865425,937