Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 66 cluster(s) found. 1 2
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Altta1.4
HYBRID
ALMCTG_1110:2916-2539922,483
Altte1.24
HYBRID
AT2CTG_18:180834-20626925,435
Bysni1.11
HYBRID
scaffold_0:191645-22518233,537
Bysni1.17
HYBRID
scaffold_224:666-1669316,027
Bysni1.21
HYBRID
scaffold_18:222435-24678224,347
Bysni1.26
HYBRID
scaffold_57:2710-3296430,254
Bysni1.31
HYBRID
scaffold_100:37545-7826640,721
Bysni1.36
HYBRID
scaffold_190:29567-4604716,480
Bysni1.43
HYBRID
scaffold_45:218563-25724738,684
Chagl_1.6
HYBRID
scaffold_1:3837737-387591138,174
Chagl_1.8
HYBRID
scaffold_3:37867-9178653,919
Chagl_1.9
HYBRID
scaffold_3:271430-28302811,598
Colzo1.12
HYBRID
scaffold_63:179583-20041220,829
Colzo1.49
HYBRID
scaffold_43:70085-10036530,280
Colzo1.63
HYBRID
scaffold_213:31413-5713425,721
Conap1.6
HYBRID
scaffold_25:147604-19240744,803
Fusgr1.25
HYBRID
Supercontig_3.4:4503929-452944225,513
Herpot1_1.21
HYBRID
scaffold_3:420579-4284487,869
Herpot1_1.51
HYBRID
scaffold_23:37036-5819321,157
HyNC1633_2.51
HYBRID
scaffold_14:576220-60656530,345
HyNC1633_2.55
HYBRID
scaffold_12:849292-86885119,559
Hyparg1.9
HYBRID
scaffold_338:9583-2731817,735
Hyparg1.64
HYBRID
scaffold_209:12230-4805735,827
Hyparg1.67
HYBRID
scaffold_198:16869-4608629,217
HypCO275_1.8
HYBRID
scaffold_27:132514-16045727,943
HypCO275_1.31
HYBRID
scaffold_16:302267-31522412,957
HypEC38_1.36
HYBRID
scaffold_104:93925-11598422,059
HypEC38_1.41
HYBRID
scaffold_17:166784-17974012,956
Ilyeu1.9
HYBRID
scaffold_14:820842-8283867,544
Ilyeu1.11
HYBRID
scaffold_14:1326204-136254036,336
Ilyeu1.40
HYBRID
scaffold_6:422294-43436812,074
Ilyeu1.48
HYBRID
scaffold_21:214430-24569931,269
Ilyrob1.2
HYBRID
scaffold_42:240657-2482667,609
Ilyrob1.22
HYBRID
scaffold_9:1173495-120589832,403
Ilyrob1.41
HYBRID
scaffold_17:881054-90863927,585
Ilysp1.16
HYBRID
scaffold_2:1593482-160555612,074
Ilysp1.50
HYBRID
scaffold_12:839852-86371123,859
Ilysp1.52
HYBRID
scaffold_12:1368659-140440635,747
Ilysp1.54
HYBRID
scaffold_18:200102-23154431,442
Micca1.8
HYBRID
Supercontig_8:1370299-139987829,579
Micca1.32
HYBRID
Supercontig_1:1257788-129502337,235
Micca1.34
HYBRID
Supercontig_1:2721651-274018418,533
Micca1.35
HYBRID
Supercontig_3:490-2086020,370
Micca1.37
HYBRID
Supercontig_3:932303-94838916,086
Mycreb1.44
HYBRID
scaffold_8:1888736-18972508,514
Mycreb1.48
HYBRID
scaffold_14:499561-5084078,846
Mycreb1.75
HYBRID
scaffold_49:748258-76061912,361
Mycreb1.80
HYBRID
scaffold_30:1309846-132147611,630
Penste1.7
HYBRID
scaffold_11:240495-27201831,523
Penste1.13
HYBRID
scaffold_13:113884-13626122,377