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Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 193 cluster(s) found. 1 2 3 4
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Altta1.2
PKS-Like
ALMCTG_487:7287-122224,935
Altta1.13
PKS-Like
ALMCTG_1381:21524-304998,975
Altta1.18
PKS-Like
ALMCTG_1032:10295-177327,437
Altte1.10
PKS-Like
AT2CTG_122:864848-8722857,437
Altte1.15
PKS-Like
AT2CTG_83:7875-2542817,553
Altte1.28
PKS-Like
AT2CTG_274:261452-2704468,994
Blugra1.1
PKS-Like
scaffold_124:25690-271001,410
Blugra1.2
PKS-Like
scaffold_1740:189350-1950375,687
BlugrR1_1.2
PKS-Like
tig_005327:2645663-26483762,713
BlugrR1_1.5
PKS-Like
tig_000067:1162368-11687006,332
Byssp1.10
PKS-Like
scaffold_137:207670-2130285,358
Byssp1.21
PKS-Like
scaffold_43:15467-5776942,302
Chain1.18
PKS-Like
NODE_1461:59608-610411,433
Chain1.20
PKS-Like
NODE_322:64861-7935414,493
Chlre4.1
PKS-Like
chromosome_7:3161025-318039519,370
Chlre4.2
PKS-Like
scaffold_22:361330-37198310,653
Chlre4.3
PKS-Like
chromosome_10:2665509-26683652,856
Chlre4.4
PKS-Like
chromosome_10:4076874-415820781,333
Conco1.4
PKS-Like
scaffold_14:103294-1049481,654
Conco1.10
PKS-Like
scaffold_369:1-19361,935
Conco1.11
PKS-Like
scaffold_369:17465-192311,766
Conli1.3
PKS-Like
NODE_4099:19778-243244,546
Conli1.22
PKS-Like
NODE_3290:18440-3368715,247
Conli1.25
PKS-Like
NODE_7798:104149-11831614,167
Conlig1.13
PKS-Like
scaffold_2:1813898-182807714,179
Conlig1.21
PKS-Like
scaffold_6:382668-39757714,909
Fusco1.2
PKS-Like
scaffold_7:2735524-27407365,212
Fusco1.24
PKS-Like
scaffold_3:1325449-133879613,347
Fusco1.44
PKS-Like
scaffold_5:2418566-243792619,360
FusoxFo47.20
PKS-Like
supercont1_10:1710471-173174921,278
FusoxFo47.23
PKS-Like
supercont1_3:1407185-142360316,418
FusoxFo47.34
PKS-Like
supercont1_1:6051102-60586567,554
FusoxFo47.44
PKS-Like
supercont1_4:2230955-227026439,309
Ganpr1.1
PKS-Like
scaffold_128:43316-6858625,270
Ganpr1.2
PKS-Like
scaffold_1:19782-224562,674
Ganpr1.4
PKS-Like
scaffold_16:450058-46530815,250
Gervar1.3
PKS-Like
scaffold_7:320381-3229282,547
Gervar1.10
PKS-Like
scaffold_119:16283-2915912,876
Gyman1.50
PKS-Like
scaffold_37:325016-3307975,781
Hyparg1.19
PKS-Like
scaffold_67:11141-2345112,310
Hyparg1.27
PKS-Like
scaffold_2:432615-45655123,936
Hyparg1.34
PKS-Like
scaffold_9:469325-4707491,424
Hyparg1.52
PKS-Like
scaffold_12:237338-2473069,968
Hyparg1.57
PKS-Like
scaffold_59:1999-1664114,642
Hypcer1.7
PKS-Like
scaffold_14:719671-75434534,674
Hypcer1.23
PKS-Like
scaffold_12:395560-42643530,875
Hypcer1.69
PKS-Like
scaffold_20:133071-14627913,208
HypEC38_1.16
PKS-Like
scaffold_30:146547-15990813,361
HypEC38_1.28
PKS-Like
scaffold_26:198570-22905730,487
HypEC38_1.52
PKS-Like
scaffold_66:167775-20454036,765