Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 18 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Geocar1.1
PKS-Like
scaffold_32:100258-1017051,447
Geocar1.2
PKS
scaffold_30:39492-5149912,007
Geocar1.3
NRPS-Like
scaffold_3:540346-5434843,138
Geocar1.4
NRPS-Like
scaffold_2:415153-4198754,722
Geocar1.5
NRPS
scaffold_5:1327277-134471317,436
Geocar1.6
PKS
scaffold_7:263556-28395020,394
Geocar1.7
NRPS
scaffold_8:749372-76128011,908
Geocar1.8
NRPS
scaffold_20:398609-43494436,335
Geocar1.9
PKS
scaffold_22:263317-2704917,174
Geocar1.10
PKS
scaffold_23:799159-81277113,612
Geocar1.11
PKS-Like
scaffold_25:710852-72489714,045
Geocar1.12
NRPS-Like
scaffold_27:586333-5901603,827
Geocar1.13
TC
scaffold_15:756426-77013313,707
Geocar1.14
PKS
scaffold_16:995789-10039648,175
Geocar1.15
NRPS-Like
scaffold_10:701915-71619514,280
Geocar1.16
NRPS-Like
scaffold_18:813966-8175213,555
Geocar1.17
PKS
scaffold_64:114196-1230518,855
Geocar1.18
PKS
scaffold_66:64423-718527,429