Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 19 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Gigro1.1
PKS-Like
scaffold_3107:5014-73702,356
Gigro1.2
NRPS-Like
scaffold_2352:20684-232952,611
Gigro1.3
HYBRID
scaffold_775:98865-1042145,349
Gigro1.4
NRPS-Like
scaffold_565:198109-2013553,246
Gigro1.5
NRPS-Like
scaffold_565:214586-2173732,787
Gigro1.6
HYBRID
scaffold_386:264712-2716316,919
Gigro1.7
TC
scaffold_466:57926-58819893
Gigro1.8
HYBRID
scaffold_62:508854-5159807,126
Gigro1.9
PKS-Like
scaffold_2470:23578-251661,588
Gigro1.10
HYBRID
scaffold_43:133368-1394056,037
Gigro1.11
NRPS
scaffold_2120:53085-587675,682
Gigro1.12
NRPS-Like
scaffold_1835:93716-959842,268
Gigro1.13
NRPS-Like
scaffold_83:44983-469021,919
Gigro1.14
NRPS-Like
scaffold_1329:77858-810223,164
Gigro1.15
NRPS-Like
scaffold_693:123983-1266052,622
Gigro1.16
PKS-Like
scaffold_1060:13171-152672,096
Gigro1.17
HYBRID
scaffold_867:112947-1203627,415
Gigro1.18
TC
scaffold_1070:158450-159235785
Gigro1.19
NRPS-Like
scaffold_784:151815-1548983,083