Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 20 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Lacaka1.1
TC
scaffold_125:36129-374841,355
Lacaka1.2
TC
scaffold_125:79237-807741,537
Lacaka1.3
TC
scaffold_125:86067-875971,530
Lacaka1.4
TC
scaffold_91:123433-14024316,810
Lacaka1.5
TC
scaffold_22:109250-1108821,632
Lacaka1.6
TC
scaffold_27:28477-4306014,583
Lacaka1.7
TC
scaffold_27:45501-470811,580
Lacaka1.8
TC
scaffold_27:72306-11001437,708
Lacaka1.9
TC
scaffold_1:1173960-11752501,290
Lacaka1.10
TC
scaffold_1:2593231-25943391,108
Lacaka1.11
PKS
scaffold_5:167110-19706929,959
Lacaka1.12
TC
scaffold_4:352815-3543141,499
Lacaka1.13
NRPS-Like
scaffold_6:659405-67402214,617
Lacaka1.14
TC
scaffold_8:306639-31752910,890
Lacaka1.15
TC
scaffold_12:547244-5564639,219
Lacaka1.16
TC
scaffold_140:8526-149846,458
Lacaka1.17
TC
scaffold_140:61059-61650591
Lacaka1.18
NRPS-Like
scaffold_46:260165-2648164,651
Lacaka1.19
PKS
scaffold_31:275126-28815413,028
Lacaka1.20
TC
scaffold_76:114948-1245139,565