Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 17 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Lacbi2.1
PKS
LG_10:874845-8814826,637
Lacbi2.2
TC
LG_10:3756440-37576851,245
Lacbi2.3
NRPS-Like
scaffold_15:111106-14945038,344
Lacbi2.4
TC
scaffold_14:465698-48349217,794
Lacbi2.5
TC
scaffold_11:234664-2357841,120
Lacbi2.6
TC
scaffold_11:1311779-13158624,083
Lacbi2.7
TC
LG_6:1579574-15856156,041
Lacbi2.8
TC
LG_4:1211885-12131501,265
Lacbi2.9
PKS
LG_4:1835074-18417116,637
Lacbi2.10
TC
LG_2:1148992-116708918,097
Lacbi2.11
PKS-Like
LG_2:1421306-14242472,941
Lacbi2.12
NRPS-Like
LG_2:3148466-31549206,454
Lacbi2.13
PKS
LG_3:4030738-406615835,420
Lacbi2.14
DMAT
LG_1:7886643-789958512,942
Lacbi2.15
NRPS-Like
LG_1:10736426-1075324816,822
Lacbi2.16
NRPS-Like
LG_1:10760959-107652224,263
Lacbi2.17
TC
LG_8:20603-217911,188