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Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 16 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Lacpsa1.1
NRPS-Like
scaffold_23:1714-1961617,902
Lacpsa1.2
TC
scaffold_27:89790-914051,615
Lacpsa1.3
TC
scaffold_27:175274-1766271,353
Lacpsa1.4
TC
scaffold_27:201204-2084257,221
Lacpsa1.5
TC
scaffold_178:252-84238,171
Lacpsa1.6
TC
scaffold_68:108848-1101021,254
Lacpsa1.7
TC
scaffold_1:978018-9791591,141
Lacpsa1.8
TC
scaffold_1:1060528-108749426,966
Lacpsa1.9
TC
scaffold_3:589428-61938729,959
Lacpsa1.10
TC
scaffold_2:271647-2729541,307
Lacpsa1.11
PKS
scaffold_6:44392-5609311,701
Lacpsa1.12
NRPS-Like
scaffold_8:529442-5340014,559
Lacpsa1.13
PKS
scaffold_10:195476-20866613,190
Lacpsa1.14
TC
scaffold_55:41827-5782215,995
Lacpsa1.15
TC
scaffold_289:5215-2020814,993
Lacpsa1.16
TC
scaffold_289:54757-584353,678