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Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 65 cluster(s) found. 1 2
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Oidma1.1
PKS-Like
scaffold_8:15654-171121,458
Oidma1.2
NRPS
scaffold_8:629981-65290122,920
Oidma1.3
PKS
scaffold_8:1370909-139558924,680
Oidma1.4
PKS
scaffold_33:79164-10517626,012
Oidma1.5
PKS
scaffold_54:8979-179969,017
Oidma1.6
NRPS-Like
scaffold_15:688489-71488326,394
Oidma1.7
PKS
scaffold_14:583359-5901296,770
Oidma1.8
PKS
scaffold_14:738101-7478839,782
Oidma1.9
PKS
scaffold_14:1007781-103116723,386
Oidma1.10
PKS
scaffold_17:138117-15303614,919
Oidma1.11
PKS
scaffold_17:215402-29683881,436
Oidma1.12
NRPS
scaffold_17:406167-43872632,559
Oidma1.13
NRPS-Like
scaffold_16:236749-25613219,383
Oidma1.14
NRPS-Like
scaffold_16:786572-82060134,029
Oidma1.15
PKS
scaffold_11:1202732-122924526,513
Oidma1.16
NRPS-Like
scaffold_10:157950-1615683,618
Oidma1.17
PKS
scaffold_13:52112-614799,367
Oidma1.18
PKS
scaffold_13:246950-28470437,754
Oidma1.19
NRPS
scaffold_13:510475-53266522,190
Oidma1.20
HYBRID
scaffold_13:748094-76870020,606
Oidma1.21
PKS
scaffold_13:913089-9223769,287
Oidma1.22
PKS
scaffold_12:393442-40652013,078
Oidma1.23
PKS
scaffold_38:50508-6608215,574
Oidma1.24
NRPS
scaffold_38:89301-10531416,013
Oidma1.25
PKS
scaffold_35:16972-5834841,376
Oidma1.26
NRPS-Like
scaffold_35:60214-8195021,736
Oidma1.27
NRPS-Like
scaffold_35:130138-14760617,468
Oidma1.28
PKS
scaffold_34:36391-6197325,582
Oidma1.29
PKS
scaffold_34:72893-9475021,857
Oidma1.30
TC
scaffold_1:277425-31774540,320
Oidma1.31
PKS
scaffold_1:386968-40853621,568
Oidma1.32
NRPS-Like
scaffold_1:416913-44181424,901
Oidma1.33
HYBRID
scaffold_1:471454-50145229,998
Oidma1.34
PKS
scaffold_1:806833-82698620,153
Oidma1.35
PKS-Like
scaffold_1:1767892-17711793,287
Oidma1.36
PKS-Like
scaffold_1:2806200-282258016,380
Oidma1.37
NRPS-Like
scaffold_1:3296665-33000603,395
Oidma1.38
TC
scaffold_1:4437280-445787020,590
Oidma1.39
NRPS-Like
scaffold_1:5476316-54839447,628
Oidma1.40
NRPS-Like
scaffold_1:6145341-617577830,437
Oidma1.41
PKS
scaffold_1:6247902-627402726,125
Oidma1.42
PKS
scaffold_3:2098615-21048396,224
Oidma1.43
DMAT
scaffold_3:2164170-21692085,038
Oidma1.44
PKS
scaffold_3:2180501-219868918,188
Oidma1.45
PKS
scaffold_3:2648741-270082052,079
Oidma1.46
NRPS-Like
scaffold_5:412312-4221999,887
Oidma1.47
NRPS-Like
scaffold_5:2111022-212557514,553
Oidma1.48
NRPS-Like
scaffold_5:2203027-224846645,439
Oidma1.49
PKS
scaffold_4:1749258-177005420,796
Oidma1.50
PKS
scaffold_6:2061089-20682157,126