Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 34 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Oidma1.3
PKS
scaffold_8:1370909-139558924,680
Oidma1.4
PKS
scaffold_33:79164-10517626,012
Oidma1.5
PKS
scaffold_54:8979-179969,017
Oidma1.7
PKS
scaffold_14:583359-5901296,770
Oidma1.8
PKS
scaffold_14:738101-7478839,782
Oidma1.9
PKS
scaffold_14:1007781-103116723,386
Oidma1.10
PKS
scaffold_17:138117-15303614,919
Oidma1.11
PKS
scaffold_17:215402-29683881,436
Oidma1.15
PKS
scaffold_11:1202732-122924526,513
Oidma1.17
PKS
scaffold_13:52112-614799,367
Oidma1.18
PKS
scaffold_13:246950-28470437,754
Oidma1.21
PKS
scaffold_13:913089-9223769,287
Oidma1.22
PKS
scaffold_12:393442-40652013,078
Oidma1.23
PKS
scaffold_38:50508-6608215,574
Oidma1.25
PKS
scaffold_35:16972-5834841,376
Oidma1.28
PKS
scaffold_34:36391-6197325,582
Oidma1.29
PKS
scaffold_34:72893-9475021,857
Oidma1.31
PKS
scaffold_1:386968-40853621,568
Oidma1.34
PKS
scaffold_1:806833-82698620,153
Oidma1.41
PKS
scaffold_1:6247902-627402726,125
Oidma1.42
PKS
scaffold_3:2098615-21048396,224
Oidma1.44
PKS
scaffold_3:2180501-219868918,188
Oidma1.45
PKS
scaffold_3:2648741-270082052,079
Oidma1.49
PKS
scaffold_4:1749258-177005420,796
Oidma1.50
PKS
scaffold_6:2061089-20682157,126
Oidma1.52
PKS
scaffold_9:747711-76952021,809
Oidma1.53
PKS
scaffold_9:957413-97063513,222
Oidma1.54
PKS
scaffold_9:1074016-110422530,209
Oidma1.55
PKS
scaffold_9:1346212-136860322,391
Oidma1.56
PKS
scaffold_20:49145-6557816,433
Oidma1.57
PKS
scaffold_20:496433-53058734,154
Oidma1.58
PKS
scaffold_20:815255-84824632,991
Oidma1.59
PKS
scaffold_21:686114-73051944,405
Oidma1.64
PKS
scaffold_28:97504-12690829,404