Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 23 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Paxam1.1
NRPS-Like
scaffold_124:62036-660614,025
Paxam1.2
NRPS-Like
scaffold_127:2444-63123,868
Paxam1.3
HYBRID
scaffold_22:209174-22905819,884
Paxam1.4
TC
scaffold_24:53199-594806,281
Paxam1.5
NRPS-Like
scaffold_29:87302-11131724,015
Paxam1.6
NRPS-Like
scaffold_274:472-49344,462
Paxam1.7
TC
scaffold_60:103461-1046151,154
Paxam1.8
NRPS-Like
scaffold_390:4520-1652212,002
Paxam1.9
NRPS-Like
scaffold_85:53336-7712223,786
Paxam1.10
TC
scaffold_5:125102-14157116,469
Paxam1.11
NRPS
scaffold_7:120567-13145310,886
Paxam1.12
NRPS-Like
scaffold_86:17408-204543,046
Paxam1.13
NRPS-Like
scaffold_340:11155-2229911,144
Paxam1.14
PKS
scaffold_12:64076-8994725,871
Paxam1.15
NRPS-Like
scaffold_61:45172-8322638,054
Paxam1.16
NRPS-Like
scaffold_142:13776-170463,270
Paxam1.17
PKS
scaffold_212:1156-107879,631
Paxam1.18
PKS
scaffold_214:3660-2866125,001
Paxam1.19
HYBRID
scaffold_205:6439-1822611,787
Paxam1.20
TC
scaffold_166:15284-231097,825
Paxam1.21
PKS
scaffold_161:505-1789117,386
Paxam1.22
NRPS-Like
scaffold_78:434-46524,218
Paxam1.23
NRPS-Like
scaffold_75:59526-642024,676