Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 29 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Paxin1.1
NRPS-Like
scaffold_20:169857-19527925,422
Paxin1.2
TC
scaffold_21:366268-3674221,154
Paxin1.3
NRPS-Like
scaffold_16:355064-3581463,082
Paxin1.4
NRPS-Like
scaffold_16:432469-4418259,356
Paxin1.5
NRPS
scaffold_10:1031514-10396508,136
Paxin1.6
TC
scaffold_13:792218-7980625,844
Paxin1.7
PKS-Like
scaffold_12:186597-19962813,031
Paxin1.8
PKS-Like
scaffold_12:209850-22054210,692
Paxin1.9
NRPS-Like
scaffold_12:403080-4130119,931
Paxin1.10
NRPS-Like
scaffold_12:417874-4218924,018
Paxin1.11
NRPS-Like
scaffold_12:634606-64936814,762
Paxin1.12
PKS
scaffold_18:140868-1450744,206
Paxin1.13
PKS
scaffold_18:331689-3388147,125
Paxin1.14
TC
scaffold_351:10792-120591,267
Paxin1.15
PKS-Like
scaffold_40:207131-2089311,800
Paxin1.16
NRPS
scaffold_40:215214-2189733,759
Paxin1.17
PKS
scaffold_1654:22-25582,536
Paxin1.18
NRPS-Like
scaffold_5:1083371-10904667,095
Paxin1.19
TC
scaffold_4:1139677-116185022,173
Paxin1.20
NRPS-Like
scaffold_4:1185864-11897973,933
Paxin1.21
NRPS-Like
scaffold_4:1385207-141082425,617
Paxin1.22
NRPS-Like
scaffold_4:1460131-14632913,160
Paxin1.23
NRPS-Like
scaffold_7:270121-2792819,160
Paxin1.24
TC
scaffold_7:300122-3018291,707
Paxin1.25
PKS
scaffold_8:182022-1885286,506
Paxin1.26
TC
scaffold_82:70802-8755016,748
Paxin1.27
NRPS-Like
scaffold_109:51359-587757,416
Paxin1.28
NRPS-Like
scaffold_1416:1247-32321,985
Paxin1.29
PKS
scaffold_30:84073-11026926,196