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Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 16 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Paxru2.1
NRPS-Like
scaffold_95:123326-14565722,331
Paxru2.2
HYBRID
scaffold_330:43568-5536411,796
Paxru2.3
NRPS-Like
scaffold_473:30468-344093,941
Paxru2.4
NRPS-Like
scaffold_621:2362-62103,848
Paxru2.5
TC
scaffold_64:89655-975817,926
Paxru2.6
PKS
scaffold_1:199864-21338813,524
Paxru2.7
TC
scaffold_6:353656-37543521,779
Paxru2.8
TC
scaffold_86:22764-241361,372
Paxru2.9
TC
scaffold_343:8308-100091,701
Paxru2.10
NRPS-Like
scaffold_18:231197-2360164,819
Paxru2.11
PKS
scaffold_350:26465-333776,912
Paxru2.12
HYBRID
scaffold_678:2706-1613513,429
Paxru2.13
TC
scaffold_43:90716-964885,772
Paxru2.14
NRPS
scaffold_41:67673-758888,215
Paxru2.15
NRPS-Like
scaffold_556:9480-112871,807
Paxru2.16
NRPS-Like
scaffold_206:85080-889903,910