Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 30 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Pilbys1.1
PKS
scaffold_24:110715-15855947,844
Pilbys1.2
PKS
scaffold_69:232589-2380985,509
Pilbys1.3
NRPS-Like
scaffold_60:33154-4664213,488
Pilbys1.4
NRPS-Like
scaffold_1:754623-7608246,201
Pilbys1.5
NRPS-Like
scaffold_7:39557-437814,224
Pilbys1.6
NRPS-Like
scaffold_7:56876-613674,491
Pilbys1.7
NRPS-Like
scaffold_7:691261-71449823,237
Pilbys1.8
PKS
scaffold_87:145328-1533708,042
Pilbys1.9
TC
scaffold_614:10770-125691,799
Pilbys1.10
TC
scaffold_14:276375-2775371,162
Pilbys1.11
NRPS-Like
scaffold_16:467759-4723364,577
Pilbys1.12
TC
scaffold_11:792309-7982535,944
Pilbys1.13
NRPS-Like
scaffold_115:62518-668694,351
Pilbys1.14
NRPS-Like
scaffold_147:69619-9651826,899
Pilbys1.15
NRPS-Like
scaffold_147:149788-1539914,203
Pilbys1.16
DMAT
scaffold_149:40505-420441,539
Pilbys1.17
DMAT
scaffold_149:64476-658701,394
Pilbys1.18
NRPS-Like
scaffold_55:251447-26358312,136
Pilbys1.19
PKS
scaffold_98:221524-2272755,751
Pilbys1.20
TC
scaffold_93:141627-1431011,474
Pilbys1.21
NRPS-Like
scaffold_217:108030-1121034,073
Pilbys1.22
PKS
scaffold_153:117602-1254607,858
Pilbys1.23
NRPS-Like
scaffold_44:319961-34030020,339
Pilbys1.24
TC
scaffold_32:195832-1973291,497
Pilbys1.25
PKS
scaffold_110:6311-141857,874
Pilbys1.26
DMAT
scaffold_110:64495-665432,048
Pilbys1.27
PKS
scaffold_118:127005-1367609,755
Pilbys1.28
NRPS-Like
scaffold_160:44872-5936314,491
Pilbys1.29
NRPS-Like
scaffold_77:166674-1706183,944
Pilbys1.30
PKS
scaffold_70:49421-563986,977