Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 28 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Pilcr1.1
NRPS-Like
scaffold_00028:267343-2738766,533
Pilcr1.2
NRPS-Like
scaffold_00001:697613-7066659,052
Pilcr1.3
TC
scaffold_00002:404237-4061661,929
Pilcr1.4
NRPS-Like
scaffold_00009:1067802-10720744,272
Pilcr1.5
PKS-Like
scaffold_00139:125-38183,693
Pilcr1.6
DMAT
scaffold_00041:34430-428658,435
Pilcr1.7
NRPS-Like
scaffold_00045:339629-35490615,277
Pilcr1.8
TC
scaffold_00112:48492-532784,786
Pilcr1.9
NRPS
scaffold_00030:103790-14119137,401
Pilcr1.10
NRPS-Like
scaffold_00039:158155-1639195,764
Pilcr1.11
NRPS-Like
scaffold_00039:196595-2023625,767
Pilcr1.12
PKS
scaffold_00107:88444-977999,355
Pilcr1.13
TC
scaffold_00101:67056-716074,551
Pilcr1.14
PKS
scaffold_00103:67746-775989,852
Pilcr1.15
TC
scaffold_00079:67005-682211,216
Pilcr1.16
TC
scaffold_00095:91367-928651,498
Pilcr1.17
NRPS-Like
scaffold_00059:208188-24157833,390
Pilcr1.18
DMAT
scaffold_00118:62096-639371,841
Pilcr1.19
DMAT
scaffold_00110:58060-596071,547
Pilcr1.20
NRPS-Like
scaffold_00069:31896-4263510,739
Pilcr1.21
PKS
scaffold_00015:289516-2938114,295
Pilcr1.22
PKS
scaffold_00015:364994-3700415,047
Pilcr1.23
NRPS-Like
scaffold_00015:478201-50490426,703
Pilcr1.24
PKS
scaffold_00019:310519-32339912,880
Pilcr1.25
NRPS-Like
scaffold_00058:48326-6695418,628
Pilcr1.26
NRPS-Like
scaffold_00058:110571-1145744,003
Pilcr1.27
NRPS-Like
scaffold_00052:253575-2579554,380
Pilcr1.28
PKS
scaffold_00054:141223-16002818,805