Secondary Metabolism Clusters • Mycorrhizal Fungi

Within the framework of the JGI Mycorrhizal Genomics Initiative (MGI) project, we are sequencing a phylogenetically and ecologically diverse suite of mycorrhizal fungi (Basidiomycota and Ascomycota), which include the major clades of symbiotic species associating with trees and woody shrubs. Analyses of these genomes will provide new insights into the diversity of mechanisms for the mycorrhizal symbioses, including ericoid-, orchidoid- and ectomycorrhizal associations. A large collaborative effort led by PI of these project, Francis Martin (INRA), aims for master publication(s) of the MGI data analyses. Researchers who wish to publish analyses using data from unpublished MGI genomes are respectfully required to contact the PIs and JGI to avoid potential conflicts on data use and coordinate other publications with the MGI master paper(s).

Genomes Cluster Type Scale Clusters
Per Page

Total 21 cluster(s) found. 1
Cluster Id
Cluster Type
Scaffold
Size (bp)
Genes
Cluster IdCluster TypeScaffoldSize (bp)Genes
Piscro1.1
TC
scaffold_92:110963-12513714,174
Piscro1.2
HYBRID
scaffold_237:112814-12380210,988
Piscro1.3
NRPS-Like
scaffold_231:10181-112561,075
Piscro1.4
NRPS-Like
scaffold_21:7333-154698,136
Piscro1.5
TC
scaffold_24:211324-2206069,282
Piscro1.6
TC
scaffold_60:20128-215951,467
Piscro1.7
NRPS-Like
scaffold_60:282376-30501322,637
Piscro1.8
NRPS-Like
scaffold_63:217498-23749119,993
Piscro1.9
NRPS-Like
scaffold_189:75275-9040015,125
Piscro1.10
TC
scaffold_3:50973-6607715,104
Piscro1.11
NRPS
scaffold_3:539711-55058710,876
Piscro1.12
NRPS-Like
scaffold_5:72411-9633623,925
Piscro1.13
NRPS-Like
scaffold_241:85745-10026014,515
Piscro1.14
NRPS-Like
scaffold_223:94498-990514,553
Piscro1.15
NRPS-Like
scaffold_14:514959-54193826,979
Piscro1.16
TC
scaffold_19:186448-1882381,790
Piscro1.17
NRPS-Like
scaffold_269:60159-647724,613
Piscro1.18
HYBRID
scaffold_90:117520-12964012,120
Piscro1.19
HYBRID
scaffold_352:49141-586639,522
Piscro1.20
TC
scaffold_37:3541-1682313,282
Piscro1.21
TC
scaffold_162:111661-1127791,118